iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSONIG00000000418.1	ENSONIT00000000530.1	ENSONIP00000000531.1
ENSONIG00000000418.1	ENSONIT00000000531.1	ENSONIP00000000532.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.90e-18	65.6	1380	1415
UBD/Beta-Prp	4.40e-49	167.7	1378	1559

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclafsdtllvsGsdDgtikvWDlrtgvll 36
           gH++ v++++ +++ll ++s+D t+k +Dl +++++
   Q: 1380 GHQEAVNAMQIHNGLLYTCSGDRTVKAFDLVSHKCV 1415
           8**********44********************997 PP

UBD/Beta-Prp

   S: 48   lsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfsp..sg.dklvsGshdrtirvwdletgqclee 131
           ++gh+++v+a+++++   +l t+s Drt+k +dl + kcv t++gh+++v +l +s+  s  ++l sGs+d++ir++ l+t++  + 
   Q: 1378 FEGHQEAVNAMQIHNG--LLYTCSGDRTVKAFDLVSHKCVGTFEGHSSKVSCLLVSAapSLhHRLYSGSSDQIIRCYSLRTRELEQ- 1461
           59**************..9********************************96655555666********************9998. PP
   S: 132  tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsng..kelvsgsldgtvklwdlqtgecvr 216
            +s  d   +++++h+  + l +G +++tv  ++lkt+k ++ ++    ++v +l+ +++g  + l+ gs+d+t+ + d ++g  +r
   Q: 1462 QFSLSD---RVLCLHSRWKTLYAGLANGTVVTFNLKTNKQMDVFECHGPRAVSCLASSQEGarRILLVGSYDSTISVRDAKNGLLLR 1545
           555544...566677766**************************99778999****999999999********************** PP
   S: 217  tlnghtdnvksvrf 230
           tl+ght++v+++++
   Q: 1546 TLEGHTKTVLCMKV 1559
           ***********986 PP

Organism

Oreochromis niloticus

Protein Sequence
(Fasta)

MTRDRKCILC ETVYVSKQEM DEHMRSMLHH RELENLKGRD CGHECRVCKV KVVSLTDYAS 60
HISSPTHKQN VEAADQKPAG LDHEEDYFDQ ELVDLIEKRK EKIRKEKEAA AAKLAKEEED 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CGCATCTTGG GTTGGTGCTC CGTTTGGGGG CGCGGCGAGG AGGCGGATGT TGTTATTAGC 60
TTCAGCGATG GATGAGAAAA TGCAGTAGTC CTACACACAT CTGGATGTTG TGAAGGTAGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR018391--PQQ_beta_propeller_repeat
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom
IPR013087--Znf_C2H2_type

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
PS00028--ZINC_FINGER_C2H2_1

Pfam

PF00400--WD40

SMART

SM00564--PQQ
SM00320--WD40
SM00355--ZnF_C2H2

Gene Ontology

GO:0046872--F:metal ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001928	Ailuropoda melanoleuca	68.20	0.00e+00	646.00
IUUC-Apl-003674	Anas platyrhynchos	45.00	0.00e+00	803.00
IUUC-Aca-005018	Anolis carolinensis	74.65	5.00e-179	622.00
IUUC-Ame-011431	Astyanax mexicanus	78.83	0.00e+00	694.00
IUUC-Bta-013436	Bos taurus	68.20	0.00e+00	645.00
IUUC-Cfa-020278	Canis familiaris	53.80	8.00e-39	157.00
IUUC-Cpo-022278	Cavia porcellus	62.82	0.00e+00	638.00
IUUC-Csa-023115	Chlorocebus sabaeus	68.20	0.00e+00	645.00
IUUC-Cho-024829	Choloepus hoffmanni	73.31	1.00e-115	412.00
IUUC-Dre-028112	Danio rerio	62.34	0.00e+00	679.00
IUUC-Dno-029127	Dasypus novemcinctus	68.45	0.00e+00	647.00
IUUC-Dor-030367	Dipodomys ordii	67.30	2.00e-164	574.00
IUUC-Ete-032500	Echinops telfairi	73.01	5.00e-158	553.00
IUUC-Eca-034319	Equus caballus	67.95	0.00e+00	643.00
IUUC-Eeu-034754	Erinaceus europaeus	64.18	2.00e-134	474.00
IUUC-Fca-036181	Felis catus	68.69	0.00e+00	650.00
IUUC-Fal-036865	Ficedula albicollis	68.43	3.00e-175	610.00
IUUC-Gmo-039227	Gadus morhua	74.94	0.00e+00	672.00
IUUC-Gga-041178	Gallus gallus	69.27	0.00e+00	635.00
IUUC-Gac-042209	Gasterosteus aculeatus	63.81	0.00e+00	931.00
IUUC-Itr-048628	Ictidomys tridecemlineatus	57.98	0.00e+00	649.00
IUUC-Lch-049753	Latimeria chalumnae	45.72	0.00e+00	833.00
IUUC-Loc-052333	Lepisosteus oculatus	73.48	0.00e+00	629.00
IUUC-Laf-053530	Loxodonta africana	67.39	0.00e+00	635.00
IUUC-Meu-056609	Macropus eugenii	63.11	6.00e-152	532.00
IUUC-Mga-059632	Meleagris gallopavo	68.86	1.00e-180	628.00
IUUC-Mmr-060742	Microcebus murinus	68.69	0.00e+00	647.00
IUUC-Mdo-061831	Monodelphis domestica	73.22	0.00e+00	630.00
IUUC-Mmu-064055	Mus musculus	67.88	0.00e+00	642.00
IUUC-Mpu-066458	Mustela putorius furo	73.22	0.00e+00	632.00
IUUC-Mlu-067767	Myotis lucifugus	68.45	0.00e+00	647.00
IUUC-Opr-070914	Ochotona princeps	67.85	0.00e+00	643.00
IUUC-Ocu-073827	Oryctolagus cuniculus	68.20	0.00e+00	645.00
IUUC-Oga-088664	Otolemur garnettii	66.90	0.00e+00	643.00
IUUC-Oar-090256	Ovis aries	54.39	6.00e-39	157.00
IUUC-Pan-091779	Papio anubis	68.20	0.00e+00	645.00
IUUC-Psi-093267	Pelodiscus sinensis	77.29	4.00e-141	493.00
IUUC-Pma-094414	Petromyzon marinus	46.67	2.00e-38	154.00
IUUC-Pfo-097009	Poecilia formosa	63.90	0.00e+00	1182.00
IUUC-Pop-099000	Populus trichocarpa	25.76	1.00e-16	81.60
IUUC-Pca-100820	Procavia capensis	63.03	2.00e-99	358.00
IUUC-Pva-103044	Pteropus vampyrus	73.51	0.00e+00	630.00
IUUC-Rno-105960	Rattus norvegicus	67.63	0.00e+00	637.00
IUUC-Sar-113018	Sorex araneus	61.87	1.00e-162	568.00
IUUC-Ssc-115278	Sus scrofa	68.60	0.00e+00	649.00
IUUC-Tgu-117231	Taeniopygia guttata	68.45	3.00e-173	603.00
IUUC-Tru-118472	Takifugu rubripes	57.79	0.00e+00	1578.00
IUUC-Tsy-118877	Tarsius syrichta	74.77	7.00e-165	575.00
IUUC-Tni-119881	Tetraodon nigroviridis	58.25	0.00e+00	1644.00
IUUC-Tbe-127499	Tupaia belangeri	70.75	2.00e-141	498.00
IUUC-Ttr-128962	Tursiops truncatus	68.13	2.00e-180	627.00
IUUC-Vpa-130089	Vicugna pacos	76.57	2.00e-88	321.00
IUUC-Xtr-132940	Xenopus tropicalis	67.08	2.00e-173	603.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence