iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
microRNA	miRNAMap	RAID2
Post-translational Modifications (PTMs)
dbPAF	PHOSIDA
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.30e-22	77.3	756	787

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf...sdtllvsGsdDgtikvWDl 30
           H d vtc+af   +d++++sGs Dg++++W +
   Q: 756  HIDFVTCVAFlpkDDRYFLSGSLDGKLRMWHI 787
           8889*******9666***************75 PP

Organism

Caenorhabditis elegans

Protein Sequence
(Fasta)

MRRQIRTSPI ENEGDEFKNG EEPSSSGHIF GRPQNQYTST PHRPEVLNFA APSATRLAMR 60
RSEQPVTSST PFSSSSRPMS AVFNTPSLSS SGFPATSTSS IRDSSHRDRL ISLRHRMNKE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATACACAGTT TCATATCATA TCACATTTCT CGCCTCTCCA ATAACCATTA CTCTTAAAAA 60
ATGCAGTGGT TTTATTCCAG TCAACTATTG ACGATGTCAA ATAATGCGAC GACAGATCCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

KEGG

cel:CELE_R03E1.1

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000157	Aegilops tauschii	33.64	2.00e-54	206.00
IUUC-Aml-001198	Ailuropoda melanoleuca	43.83	5.00e-131	461.00
IUUC-Atr-002683	Amborella trichopoda	36.19	1.00e-56	213.00
IUUC-Apl-003781	Anas platyrhynchos	43.47	6.00e-131	460.00
IUUC-Aca-005216	Anolis carolinensis	43.99	9.00e-129	453.00
IUUC-Aly-005544	Arabidopsis lyrata	38.53	3.00e-53	202.00
IUUC-Ath-007572	Arabidopsis thaliana	38.53	7.00e-54	204.00
IUUC-Ago-007814	Ashbya gossypii	30.89	3.00e-37	148.00
IUUC-Acl-008290	Aspergillus clavatus	37.75	2.00e-56	213.00
IUUC-Afl-008536	Aspergillus flavus	40.00	3.00e-75	275.00
IUUC-Afu-008761	Aspergillus fumigatus	43.64	3.00e-76	278.00
IUUC-Ani-009270	Aspergillus nidulans	39.51	3.00e-78	285.00
IUUC-Ang-009627	Aspergillus niger	44.07	3.00e-77	282.00
IUUC-Aor-010153	Aspergillus oryzae	40.00	2.00e-75	275.00
IUUC-Ate-010263	Aspergillus terreus	44.38	1.00e-78	286.00
IUUC-Ame-011096	Astyanax mexicanus	47.70	3.00e-124	437.00
IUUC-Bgr-012014	Blumeria graminis	44.55	5.00e-70	257.00
IUUC-Bta-012991	Bos taurus	43.78	8.00e-130	456.00
IUUC-Bci-013651	Botrytis cinerea	40.05	5.00e-81	294.00
IUUC-Bdi-014734	Brachypodium distachyon	37.92	5.00e-55	207.00
IUUC-Bol-016551	Brassica oleracea	36.87	1.00e-50	193.00
IUUC-Bra-017437	Brassica rapa	37.32	9.00e-52	197.00
IUUC-Cja-019169	Callithrix jacchus	42.93	6.00e-130	457.00
IUUC-Cfa-020909	Canis familiaris	43.65	3.00e-130	457.00
IUUC-Cpo-021357	Cavia porcellus	43.29	3.00e-130	457.00
IUUC-Cre-022638	Chlamydomonas reinhardtii	33.50	6.00e-20	89.70
IUUC-Csa-023121	Chlorocebus sabaeus	42.75	5.00e-129	454.00
IUUC-Cin-025347	Ciona intestinalis	42.36	8.00e-119	419.00
IUUC-Csv-025844	Ciona savignyi	48.12	2.00e-108	384.00
IUUC-Cgl-026610	Colletotrichum gloeosporioides	40.31	2.00e-73	269.00
IUUC-Cme-027130	Cyanidioschyzon merolae	36.43	8.00e-45	174.00
IUUC-Dre-028529	Danio rerio	43.84	1.00e-125	442.00
IUUC-Dno-028930	Dasypus novemcinctus	50.55	3.00e-52	198.00
IUUC-Dor-030184	Dipodomys ordii	54.36	3.00e-95	342.00
IUUC-Dse-031178	Dothistroma septosporum	43.09	4.00e-82	298.00
IUUC-Dme-032135	Drosophila melanogaster	50.57	1.00e-130	459.00
IUUC-Ete-032457	Echinops telfairi	46.31	5.00e-112	397.00
IUUC-Eca-033319	Equus caballus	43.47	9.00e-131	459.00
IUUC-Eeu-035325	Erinaceus europaeus	47.58	4.00e-96	344.00
IUUC-Fca-036159	Felis catus	41.82	2.00e-119	422.00
IUUC-Fal-037153	Ficedula albicollis	44.03	5.00e-128	451.00
IUUC-Fox-037744	Fusarium oxysporum	45.00	6.00e-51	192.00
IUUC-Fso-038143	Fusarium solani	37.00	7.00e-70	257.00
IUUC-Gmo-039226	Gadus morhua	49.89	3.00e-123	434.00
IUUC-Ggr-039923	Gaeumannomyces graminis	43.09	6.00e-70	258.00
IUUC-Gga-040349	Gallus gallus	43.47	6.00e-131	460.00
IUUC-Gac-041620	Gasterosteus aculeatus	48.90	6.00e-126	443.00
IUUC-Gma-044217	Glycine max	38.53	3.00e-55	208.00
IUUC-Ggo-044646	Gorilla gorilla	42.93	1.00e-129	456.00
IUUC-Hsa-046353	Homo sapiens	42.93	1.00e-129	456.00
IUUC-Hvu-047755	Hordeum vulgare	38.06	4.00e-58	218.00
IUUC-Itr-048620	Ictidomys tridecemlineatus	43.65	1.00e-130	459.00
IUUC-Kpa-049365	Komagataella pastoris	33.16	5.00e-49	188.00
IUUC-Lch-049794	Latimeria chalumnae	50.56	2.00e-129	455.00
IUUC-Lpe-051282	Leersia perrieri	36.69	1.00e-51	197.00
IUUC-Loc-052691	Lepisosteus oculatus	49.67	1.00e-126	446.00
IUUC-Lma-053232	Leptosphaeria maculans	40.27	7.00e-73	267.00
IUUC-Laf-054066	Loxodonta africana	42.75	2.00e-128	452.00
IUUC-Mcc-055055	Macaca mulatta	42.63	6.00e-129	453.00
IUUC-Meu-056678	Macropus eugenii	38.78	8.00e-88	317.00
IUUC-Mor-057274	Magnaporthe oryzae	40.00	5.00e-73	268.00
IUUC-Mpo-057592	Magnaporthe poae	42.44	8.00e-70	258.00
IUUC-Mtr-058330	Medicago truncatula	37.75	5.00e-53	201.00
IUUC-Mla-059075	Melampsora laricipopulina	33.03	8.00e-27	114.00
IUUC-Mga-059659	Meleagris gallopavo	43.24	3.00e-128	451.00
IUUC-Mvi-060254	Microbotryum violaceum	42.23	7.00e-74	271.00
IUUC-Mmr-060832	Microcebus murinus	43.11	1.00e-129	456.00
IUUC-Mdo-062300	Monodelphis domestica	44.32	1.00e-132	466.00
IUUC-Mmu-064277	Mus musculus	44.19	2.00e-131	462.00
IUUC-Mac-064816	Musa acuminata	39.71	6.00e-59	221.00
IUUC-Mpu-065914	Mustela putorius furo	43.47	1.00e-130	459.00
IUUC-Mlu-067853	Myotis lucifugus	51.24	1.00e-129	456.00
IUUC-Nfi-068449	Neosartorya fischeri	36.42	3.00e-52	199.00
IUUC-Ncr-068874	Neurospora crassa	41.90	7.00e-75	274.00
IUUC-Nle-069802	Nomascus leucogenys	43.11	2.00e-130	459.00
IUUC-Opr-071139	Ochotona princeps	52.63	3.00e-94	338.00
IUUC-Ont-072128	Oreochromis niloticus	42.47	7.00e-126	443.00
IUUC-Oan-072824	Ornithorhynchus anatinus	44.47	9.00e-94	336.00
IUUC-Ocu-074311	Oryctolagus cuniculus	43.04	6.00e-130	457.00
IUUC-Oba-075039	Oryza barthii	36.74	5.00e-54	204.00
IUUC-Obr-076536	Oryza brachyantha	36.19	5.00e-54	204.00
IUUC-Ogl-077572	Oryza glaberrima	36.74	4.00e-54	205.00
IUUC-Ogu-078866	Oryza glumaepatula	36.74	4.00e-54	204.00
IUUC-Oin-079225	Oryza indica	36.74	4.00e-54	205.00
IUUC-Olo-080846	Oryza longistaminata	33.98	1.00e-42	166.00
IUUC-Ome-081525	Oryza meridionalis	36.74	3.00e-54	205.00
IUUC-Oni-082288	Oryza nivara	36.74	5.00e-54	204.00
IUUC-Opu-083458	Oryza punctata	36.74	6.00e-54	204.00
IUUC-Oru-085014	Oryza rufipogon	36.74	4.00e-54	205.00
IUUC-Osa-086029	Oryza sativa	36.74	4.00e-54	205.00
IUUC-Ola-086963	Oryzias latipes	48.32	1.00e-117	416.00
IUUC-Olu-087651	Ostreococcus lucimarinus	45.02	4.00e-51	193.00
IUUC-Oga-088623	Otolemur garnettii	43.29	4.00e-131	461.00
IUUC-Oar-090357	Ovis aries	43.65	1.00e-129	456.00
IUUC-Pan-092290	Papio anubis	43.32	1.00e-128	452.00
IUUC-Psi-094089	Pelodiscus sinensis	44.19	3.00e-132	464.00
IUUC-Pma-094528	Petromyzon marinus	54.41	4.00e-83	300.00
IUUC-Pno-094806	Phaeosphaeria nodorum	42.61	8.00e-73	266.00
IUUC-Ppa-095184	Physcomitrella patens	40.00	9.00e-62	231.00
IUUC-Pfo-097366	Poecilia formosa	43.38	6.00e-127	447.00
IUUC-Pab-098364	Pongo abelii	42.93	1.00e-129	456.00
IUUC-Pop-099728	Populus trichocarpa	34.54	2.00e-54	206.00
IUUC-Pca-100159	Procavia capensis	44.02	1.00e-101	363.00
IUUC-Ppe-101184	Prunus persica	37.07	1.00e-52	199.00
IUUC-Pva-102846	Pteropus vampyrus	55.12	4.00e-96	344.00
IUUC-Pte-104369	Pyrenophora teres	42.32	6.00e-75	274.00
IUUC-Pyt-104811	Pyrenophora triticirepentis	42.90	2.00e-75	276.00
IUUC-Rno-105467	Rattus norvegicus	44.19	2.00e-131	462.00
IUUC-Sce-106277	Saccharomyces cerevisiae	35.15	5.00e-46	178.00
IUUC-Sha-106778	Sarcophilus harrisii	44.29	7.00e-131	460.00
IUUC-Sja-107954	Schizosaccharomyces japonicus	39.44	1.00e-80	293.00
IUUC-Spo-108181	Schizosaccharomyces pombe	38.88	1.00e-79	290.00
IUUC-Smo-108748	Selaginella moellendorffii	39.23	4.00e-56	211.00
IUUC-Sit-110492	Setaria italica	37.25	5.00e-61	228.00
IUUC-Sly-111804	Solanum lycopersicum	40.34	3.00e-56	212.00
IUUC-Stu-111949	Solanum tuberosum	39.49	9.00e-57	214.00
IUUC-Sar-112958	Sorex araneus	71.43	1.00e-29	123.00
IUUC-Sbi-114564	Sorghum bicolor	36.18	2.00e-60	226.00
IUUC-Sre-114996	Sporisorium reilianum	33.33	9.00e-44	170.00
IUUC-Tgu-116614	Taeniopygia guttata	43.65	1.00e-131	462.00
IUUC-Tru-117808	Takifugu rubripes	50.00	3.00e-125	441.00
IUUC-Tsy-118845	Tarsius syrichta	53.12	2.00e-58	219.00
IUUC-Tni-120013	Tetraodon nigroviridis	49.22	4.00e-120	424.00
IUUC-Tca-121052	Theobroma cacao	36.16	9.00e-49	187.00
IUUC-Tre-122175	Trichoderma reesei	36.78	1.00e-67	249.00
IUUC-Tvi-122654	Trichoderma virens	40.82	1.00e-72	266.00
IUUC-Tae-125516	Triticum aestivum	35.92	5.00e-57	214.00
IUUC-Tur-126266	Triticum urartu	35.68	6.00e-56	210.00
IUUC-Tme-126882	Tuber melanosporum	40.05	2.00e-81	296.00
IUUC-Tbe-127531	Tupaia belangeri	53.97	2.00e-94	338.00
IUUC-Ttr-128970	Tursiops truncatus	43.47	3.00e-131	461.00
IUUC-Uma-129369	Ustilago maydis	33.96	9.00e-40	157.00
IUUC-Vda-129935	Verticillium dahliae	35.74	5.00e-73	268.00
IUUC-Vpa-130109	Vicugna pacos	40.07	6.00e-107	380.00
IUUC-Vvi-130908	Vitis vinifera	35.44	3.00e-51	195.00
IUUC-Xtr-132836	Xenopus tropicalis	50.68	6.00e-126	443.00
IUUC-Xma-134131	Xiphophorus maculatus	43.23	1.00e-126	446.00
IUUC-Yli-134376	Yarrowia lipolytica	36.04	9.00e-64	237.00
IUUC-Zma-135083	Zea mays	38.14	1.00e-60	226.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence