iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Dre-027974

UUCD1 version

UUC-DaR-00692

Ensembl Protein ID

ENSDARP00000131056.1

UniProt Accession

A0A0R4IDM2; A0A0R4IDM2_DANRE

Genbank Protein ID

ENSDARP00000131056

Protein Name

Lysine (K)-specific demethylase 2Ba

Genbank Nucleotide ID

CABZ01044756

Gene Name

kdm2ba

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSDARG00000036593.5	ENSDART00000162020.1	ENSDARP00000131056.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	5.60e-14	53.0	117	181

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 2    kvClvCgeggede.......k...slveCekCrewfHpaClkls.....veeelpnsekwiCpkCrs 53
           +vC vCge+g+++       k   +l+eC++C+e++Hp+Clk +     v++elpn+  w+CpkC+ 
   Q: 117  AVCVVCGEAGKEDtlddedeKfnaMLMECSICNEIVHPNCLKVKdaagvVNDELPNC--WECPKCNY 181
           79*********9988776651778*********************************..******96 PP

Organism

Danio rerio

Protein Sequence
(Fasta)

MAMAMSLSAD DEDYDSDTAE QQQLPNKPKP KMATSTATTP SATTSSSTAT AVKLPSNRTS 60
SGARRRRTRC RKCEACVRTE CGECHFCKDM KKFGGPGRMK QSCIMRQCIA PVLPHTAVCV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CGGGATTTGA ACTGTCATGT CCTGGAATTG TTTTTGCTCC TCTGGAGGTG ATGTTTATAT 60
TGTACGTTCG CACTGCTCCC ATTATTGTTT GCAAGTTTAA TTCTCAACAG TTTTTTTCTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001810--F-box_dom
IPR032675--L_dom-like
IPR019786--Zinc_finger_PHD-type_CS
IPR002857--Znf_CXXC
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51058--ZF_CXXC
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF00646--F-box
PF16866--PHD_4
PF02008--zf-CXXC

SMART

SM00249--PHD

Gene Ontology

GO:0003677--F:DNA binding
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ame-011114	Astyanax mexicanus	85.64	1.00e-177	617.00
IUUC-Gmo-039130	Gadus morhua	74.14	5.00e-101	362.00
IUUC-Itr-049003	Ictidomys tridecemlineatus	66.25	1.00e-127	451.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence