iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-058459

Ensembl Protein ID

AET05501

UniProt Accession

G7LCD4; A0A0C3Y8A7; G7LCD4_MEDTR

Genbank Protein ID

AET05501.2

Protein Name

C3HC4-type RING zinc finger protein

Genbank Nucleotide ID

CM001224

Gene Name

MTR_8g106240

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_8g106240	KEH21403	KEH21403
MTR_8g106240	AET05501	AET05501
MTR_8g106240	KEH21404	KEH21404

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	4.60e-07	31.7	306	347

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iC+e+f  +d++  l+C H++h++C+q+w     ++ k+f CP+C+
   Q: 306  CSICQEEFeaDDELGRLNCDHLYHFQCIQQW-----VAHKNF-CPVCK 347
           ********8866688899*************.....666677.****7 PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MSSVTQETKT EQQHMKWRKP PRNQINNKNK PISETDPNTK QIQPIIQSTR SKSTISSLLL 60
SNETTSQQPI NKKINFSSAA ATFRGLGCTA GASQQVSVPA VIRASADWPH QGKKTRKKKH 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTCAAAACTA AATAATTATA TTCCTCTGCA AAAATCAATT TCCAAAACCC ATTCTTGTTG 60
ATTCTTCTCC AACCAAACCA AACCAAACTA AACCAAACAT GTCTTCTGTG ACACAAGAAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

KEGG

mtr:MTR_8g106240

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000531	Aegilops tauschii	44.44	2.00e-44	172.00
IUUC-Aca-005299	Anolis carolinensis	36.73	3.00e-14	72.00
IUUC-Aly-006238	Arabidopsis lyrata	42.38	3.00e-62	231.00
IUUC-Ath-007538	Arabidopsis thaliana	43.41	7.00e-69	253.00
IUUC-Ame-011948	Astyanax mexicanus	36.08	2.00e-14	72.80
IUUC-Bdi-014850	Brachypodium distachyon	60.00	5.00e-41	159.00
IUUC-Bol-015289	Brassica oleracea	38.59	3.00e-60	224.00
IUUC-Bra-016878	Brassica rapa	40.05	2.00e-49	188.00
IUUC-Dre-028365	Danio rerio	36.08	9.00e-15	73.60
IUUC-Gma-044193	Glycine max	66.41	5.00e-112	396.00
IUUC-Hvu-047759	Hordeum vulgare	61.11	3.00e-41	160.00
IUUC-Lpe-051518	Leersia perrieri	42.68	1.00e-42	166.00
IUUC-Loc-052046	Lepisosteus oculatus	37.76	5.00e-15	74.30
IUUC-Mac-064842	Musa acuminata	44.01	2.00e-53	202.00
IUUC-Oba-075787	Oryza barthii	47.59	2.00e-41	161.00
IUUC-Obr-076180	Oryza brachyantha	58.06	3.00e-39	154.00
IUUC-Ogl-077027	Oryza glaberrima	47.59	2.00e-41	161.00
IUUC-Ogu-078948	Oryza glumaepatula	47.11	8.00e-51	193.00
IUUC-Oin-079890	Oryza indica	47.59	2.00e-41	161.00
IUUC-Olo-080757	Oryza longistaminata	55.91	9.00e-37	145.00
IUUC-Ome-081811	Oryza meridionalis	47.11	6.00e-51	193.00
IUUC-Oni-082479	Oryza nivara	43.48	8.00e-46	176.00
IUUC-Opu-083327	Oryza punctata	44.21	1.00e-46	179.00
IUUC-Oru-085182	Oryza rufipogon	47.75	2.00e-51	195.00
IUUC-Osa-086292	Oryza sativa	47.11	8.00e-51	193.00
IUUC-Psi-092966	Pelodiscus sinensis	34.69	8.00e-14	70.50
IUUC-Pop-099627	Populus trichocarpa	44.44	1.00e-70	259.00
IUUC-Ppe-102027	Prunus persica	44.76	7.00e-76	276.00
IUUC-Sit-110714	Setaria italica	41.83	1.00e-44	172.00
IUUC-Sly-111420	Solanum lycopersicum	40.74	2.00e-60	225.00
IUUC-Stu-112746	Solanum tuberosum	46.30	2.00e-59	221.00
IUUC-Sbi-114393	Sorghum bicolor	41.30	6.00e-41	160.00
IUUC-Tca-121581	Theobroma cacao	45.73	2.00e-82	298.00
IUUC-Tae-124850	Triticum aestivum	48.00	5.00e-49	187.00
IUUC-Tur-126099	Triticum urartu	59.69	3.00e-41	160.00
IUUC-Vvi-131571	Vitis vinifera	47.40	3.00e-71	261.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence