iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Mlu-067398

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAPE02016221

Gene Name

PRPF4

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSMLUG00000015309.2	ENSMLUT00000015311.2	ENSMLUP00000013948.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.10e-38	128.7	420	458
UBD/Beta-Prp	2.00e-61	207.8	245	492

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           gH  ++++++f ++  ++++Gs+D+t+kvWDlr+ +++ 
   Q: 420  GHLKEIYGINFsPNgYHIATGSGDNTCKVWDLRQRRCIY 458
           7999********77799****************999975 PP

UBD/Beta-Prp

   S: 9    hksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgk........ilvtgseDrtikvwdlstgkcvht 89
           ++ +i+  +fsp++++lat++++g  k+w+v + +ll++l gh+  v a+ f+p++          l++++ D+ +k+w+l++ ++v  
   Q: 245  DDRPISYCHFSPNSKMLATACWSGLCKLWSVPDCNLLHTLRGHNTNVGAIVFHPKSTvsldqkdvNLASCAADGSVKLWSLDSDEPVAD 333
           67899999********************************************99988888888999*********************** PP
   S: 90   lkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgg 178
           ++gh+ +v  + ++psg +l ++  dr  r+wdle ++++   ++gh+  v  +++h+dg+l  +G+lD + r+Wdl+tg+++  l+g 
   Q: 334  IEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQEEIL-HQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEG- 420
           *****************************************.********************************************99. PP
   S: 179  htdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfs.pnderlvsgssDgsiriW 249
           h + +y ++f++ng ++++gs d+t k+wdl++ +c++t  +h++ v+ v+f   ++++l++g+ D++ +iW
   Q: 421  HLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCIYTIPAHQNLVTGVKFEpIHGNFLLTGAYDNTAKIW 492
           *****************************************************88***************** PP

Organism

Myotis lucifugus

Protein Sequence
(Fasta)

EAEPGCGWGF AAPEPGMAST RASSTATKTK APDDLVAPVV KKPHIYYGSL EEKERERLAK 60
GESGILGKEG LKAGIEAGNI NITSGEVFEI EEHISERQAE VLAEFERRKR ARQINVSTDD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAAGCAGAGC CCGGCTGTGG CTGGGGTTTC GCGGCTCCTG AGCCCGGCAT GGCTTCCACA 60
CGAGCTTCCT CCACGGTACA GATCTCCGCT CACCCTGGCA GGGGGCACCG CGGGGCTTGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR014906--PRP4-like
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08799--PRP4
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00500--SFM
SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001737	Ailuropoda melanoleuca	98.31	0.00e+00	1026.00
IUUC-Atr-002828	Amborella trichopoda	43.54	2.00e-103	369.00
IUUC-Apl-003723	Anas platyrhynchos	88.95	0.00e+00	952.00
IUUC-Aca-004972	Anolis carolinensis	90.25	0.00e+00	898.00
IUUC-Aly-006531	Arabidopsis lyrata	43.15	1.00e-94	340.00
IUUC-Ath-007367	Arabidopsis thaliana	44.03	2.00e-108	386.00
IUUC-Ago-007893	Ashbya gossypii	32.89	6.00e-55	208.00
IUUC-Acl-008236	Aspergillus clavatus	38.65	3.00e-90	325.00
IUUC-Afl-008522	Aspergillus flavus	40.21	1.00e-98	353.00
IUUC-Afu-008904	Aspergillus fumigatus	39.12	5.00e-95	341.00
IUUC-Ani-009198	Aspergillus nidulans	39.58	4.00e-98	351.00
IUUC-Ang-009662	Aspergillus niger	42.51	2.00e-99	355.00
IUUC-Aor-009881	Aspergillus oryzae	40.21	1.00e-98	353.00
IUUC-Ate-010333	Aspergillus terreus	38.22	3.00e-88	319.00
IUUC-Ame-011697	Astyanax mexicanus	80.79	0.00e+00	817.00
IUUC-Bgr-012254	Blumeria graminis	38.76	5.00e-97	348.00
IUUC-Bta-012615	Bos taurus	98.85	0.00e+00	998.00
IUUC-Bci-013720	Botrytis cinerea	38.63	4.00e-98	352.00
IUUC-Bol-015594	Brassica oleracea	43.10	1.00e-98	353.00
IUUC-Bra-017465	Brassica rapa	42.89	8.00e-99	354.00
IUUC-Cel-018632	Caenorhabditis elegans	44.00	3.00e-108	385.00
IUUC-Cja-019747	Callithrix jacchus	99.23	0.00e+00	1037.00
IUUC-Cfa-020288	Canis familiaris	97.76	0.00e+00	1023.00
IUUC-Cpo-021440	Cavia porcellus	97.55	0.00e+00	1011.00
IUUC-Cre-022716	Chlamydomonas reinhardtii	47.47	7.00e-86	310.00
IUUC-Csa-023139	Chlorocebus sabaeus	99.70	0.00e+00	706.00
IUUC-Cho-024481	Choloepus hoffmanni	95.80	0.00e+00	863.00
IUUC-Cin-025106	Ciona intestinalis	58.91	4.00e-176	611.00
IUUC-Csv-026087	Ciona savignyi	57.54	1.00e-174	606.00
IUUC-Cgl-026538	Colletotrichum gloeosporioides	37.72	4.00e-92	332.00
IUUC-Cne-026793	Cryptococcus neoformans	41.29	4.00e-105	375.00
IUUC-Dre-028723	Danio rerio	79.80	0.00e+00	791.00
IUUC-Dno-029299	Dasypus novemcinctus	99.01	0.00e+00	1011.00
IUUC-Dor-030345	Dipodomys ordii	75.56	3.00e-99	355.00
IUUC-Dse-031562	Dothistroma septosporum	37.16	2.00e-89	323.00
IUUC-Dme-031783	Drosophila melanogaster	56.46	3.00e-140	491.00
IUUC-Ete-032669	Echinops telfairi	96.94	0.00e+00	1014.00
IUUC-Eca-033566	Equus caballus	98.87	0.00e+00	1013.00
IUUC-Eeu-034524	Erinaceus europaeus	98.74	2.00e-146	511.00
IUUC-Fca-036215	Felis catus	99.60	0.00e+00	1014.00
IUUC-Fal-037018	Ficedula albicollis	90.44	0.00e+00	795.00
IUUC-Fox-037936	Fusarium oxysporum	37.21	1.00e-85	310.00
IUUC-Fso-038366	Fusarium solani	38.22	4.00e-91	328.00
IUUC-Gmo-038966	Gadus morhua	66.95	4.00e-140	490.00
IUUC-Ggr-039942	Gaeumannomyces graminis	36.72	3.00e-84	306.00
IUUC-Gga-040797	Gallus gallus	91.42	0.00e+00	936.00
IUUC-Gac-042598	Gasterosteus aculeatus	68.79	0.00e+00	661.00
IUUC-Gma-044220	Glycine max	44.33	6.00e-103	368.00
IUUC-Ggo-044682	Gorilla gorilla	98.13	0.00e+00	1001.00
IUUC-Hsa-045804	Homo sapiens	98.85	0.00e+00	1033.00
IUUC-Itr-047882	Ictidomys tridecemlineatus	98.85	0.00e+00	1036.00
IUUC-Kpa-049369	Komagataella pastoris	33.07	2.00e-61	229.00
IUUC-Lch-050074	Latimeria chalumnae	80.15	0.00e+00	823.00
IUUC-Loc-052164	Lepisosteus oculatus	81.39	0.00e+00	838.00
IUUC-Lma-053088	Leptosphaeria maculans	36.97	2.00e-84	306.00
IUUC-Laf-053460	Loxodonta africana	98.47	0.00e+00	1029.00
IUUC-Mcc-055859	Macaca mulatta	99.60	0.00e+00	1014.00
IUUC-Meu-056134	Macropus eugenii	94.94	0.00e+00	991.00
IUUC-Mor-057251	Magnaporthe oryzae	37.45	2.00e-85	309.00
IUUC-Mla-059145	Melampsora laricipopulina	40.66	7.00e-102	363.00
IUUC-Mga-059855	Meleagris gallopavo	87.05	0.00e+00	942.00
IUUC-Mvi-060372	Microbotryum violaceum	41.73	2.00e-93	336.00
IUUC-Mmr-060826	Microcebus murinus	98.49	0.00e+00	1025.00
IUUC-Mdo-062748	Monodelphis domestica	95.64	0.00e+00	981.00
IUUC-Mmu-063351	Mus musculus	99.21	0.00e+00	1010.00
IUUC-Mpu-066006	Mustela putorius furo	99.60	0.00e+00	1014.00
IUUC-Nfi-068399	Neosartorya fischeri	38.92	1.00e-100	360.00
IUUC-Ncr-068711	Neurospora crassa	37.92	2.00e-92	333.00
IUUC-Nle-069982	Nomascus leucogenys	99.23	0.00e+00	1037.00
IUUC-Opr-070596	Ochotona princeps	98.47	0.00e+00	1031.00
IUUC-Ont-072374	Oreochromis niloticus	76.79	0.00e+00	754.00
IUUC-Oan-073166	Ornithorhynchus anatinus	93.86	0.00e+00	748.00
IUUC-Ocu-074371	Oryctolagus cuniculus	99.41	0.00e+00	1012.00
IUUC-Olo-080243	Oryza longistaminata	46.22	2.00e-90	326.00
IUUC-Ola-086940	Oryzias latipes	74.70	0.00e+00	752.00
IUUC-Olu-087580	Ostreococcus lucimarinus	35.68	7.00e-64	238.00
IUUC-Oga-088703	Otolemur garnettii	93.75	0.00e+00	985.00
IUUC-Oar-089829	Ovis aries	98.48	0.00e+00	1011.00
IUUC-Ptr-090838	Pan troglodytes	98.85	0.00e+00	1033.00
IUUC-Pan-092261	Papio anubis	98.47	0.00e+00	1027.00
IUUC-Psi-093020	Pelodiscus sinensis	90.14	0.00e+00	951.00
IUUC-Pno-094858	Phaeosphaeria nodorum	37.93	1.00e-80	293.00
IUUC-Ppa-095531	Physcomitrella patens	45.14	9.00e-118	417.00
IUUC-Pfo-096812	Poecilia formosa	69.82	0.00e+00	667.00
IUUC-Pab-097805	Pongo abelii	89.26	0.00e+00	890.00
IUUC-Pop-100051	Populus trichocarpa	44.37	4.00e-105	375.00
IUUC-Pca-100152	Procavia capensis	99.03	0.00e+00	1020.00
IUUC-Ppe-101244	Prunus persica	46.22	3.00e-106	378.00
IUUC-Pva-102529	Pteropus vampyrus	95.21	0.00e+00	984.00
IUUC-Pgr-103550	Puccinia graminis	37.08	1.00e-102	366.00
IUUC-Ptt-103951	Puccinia triticina	33.53	2.00e-81	296.00
IUUC-Pte-104151	Pyrenophora teres	37.58	4.00e-80	291.00
IUUC-Pyt-104571	Pyrenophora triticirepentis	38.23	1.00e-81	296.00
IUUC-Rno-105747	Rattus norvegicus	99.01	0.00e+00	1008.00
IUUC-Sha-107334	Sarcophilus harrisii	96.24	0.00e+00	985.00
IUUC-Spo-108189	Schizosaccharomyces pombe	38.12	2.00e-81	296.00
IUUC-Ssl-108550	Sclerotinia sclerotiorum	37.77	6.00e-96	344.00
IUUC-Smo-109578	Selaginella moellendorffii	46.57	1.00e-110	393.00
IUUC-Sly-111668	Solanum lycopersicum	46.19	9.00e-107	380.00
IUUC-Stu-111928	Solanum tuberosum	44.87	2.00e-106	379.00
IUUC-Sar-113266	Sorex araneus	86.17	0.00e+00	824.00
IUUC-Sre-115114	Sporisorium reilianum	41.51	3.00e-104	372.00
IUUC-Ssc-115443	Sus scrofa	99.60	0.00e+00	1014.00
IUUC-Tgu-117157	Taeniopygia guttata	90.47	0.00e+00	886.00
IUUC-Tru-118587	Takifugu rubripes	74.26	0.00e+00	732.00
IUUC-Tsy-119157	Tarsius syrichta	99.23	0.00e+00	782.00
IUUC-Tni-120427	Tetraodon nigroviridis	74.65	0.00e+00	740.00
IUUC-Tca-121368	Theobroma cacao	44.35	9.00e-107	380.00
IUUC-Tre-122074	Trichoderma reesei	37.45	2.00e-87	316.00
IUUC-Tme-126951	Tuber melanosporum	40.84	4.00e-101	362.00
IUUC-Tbe-128136	Tupaia belangeri	90.61	0.00e+00	922.00
IUUC-Ttr-129169	Tursiops truncatus	98.99	2.00e-166	578.00
IUUC-Uma-129399	Ustilago maydis	42.39	2.00e-102	366.00
IUUC-Vda-129842	Verticillium dahliae	38.54	2.00e-93	336.00
IUUC-Vpa-130440	Vicugna pacos	99.04	0.00e+00	1034.00
IUUC-Vvi-131075	Vitis vinifera	46.94	3.00e-107	382.00
IUUC-Xtr-132713	Xenopus tropicalis	49.31	2.00e-109	389.00
IUUC-Xma-133002	Xiphophorus maculatus	79.39	2.00e-171	595.00
IUUC-Yli-134569	Yarrowia lipolytica	36.04	4.00e-76	278.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence