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Basic Information Integrated Annotations
Tag Content
iUUCD ID IUUC-Ath-007244
Ensembl Protein ID AT5G14050.1
UniProt Accession Q9FMU5; UTP18_ARATH
Genbank Protein ID BAB08284.1; AED91981.1; AAL77685.1; AAM91464.1
Protein Name U3 small nucleolar RNA-associated protein 18 homolog
Genbank Nucleotide ID AB007650; CP002688; AY075678; AY133634
Gene Name At5g14050; MUA22.5
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
AT5G14050 AT5G14050.1 AT5G14050.1
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
Protein-protein Interaction
iRefIndexMentha
Post-translational Modifications (PTMs)
dbPTMUniProt
Protein Expression/Proteomics
GPMDB
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 2.20e-12 47.6 375 409
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD
   S: 4    dsvtclaf.sd.tllvsGsdDgtikvWDlrtgvll 36
           +sv++laf  d ++l+s+++Dg+++vWDlrt ++l
   Q: 375  GSVRSLAFsEDgKHLLSSGGDGQVYVWDLRTMKCL 409
           79******9556*******************9997 PP
   
Organism Arabidopsis thaliana
Functional Description
(View)

Functional Description


     Involved in nucleolar processing of pre-18S ribosomal RNA.
 Involved in nucleolar processing of pre-18S ribosomal RNA.
Protein Sequence
(Fasta)
MSLSQNAPKS KGIKREELKK QYEDVEDEEE IGSDDDLTRG KRRKTEKEKQ KLEESELVEM 60
KKLENLIFGS LYSPVTFGKE EEEDGSALFH VDRSAVRQIP DYEDDGDDDE ELSDEENGQV 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Ath-007244|E3,WD_repeat|Arabidopsis thaliana
Please wait for a moment...
Nucleotide Sequence
(Fasta)
ATATACTTTG CGATAATTAC GAAAGTGACA TTGTTATTTT ACCTGTCTTG GCCCATGGGC 60
TTTTTCAAGA GACATAAGAC CCGTTGACCC ATTAAAGGGC TGTATTAACG ACAAGTTCCA 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Ath-007244|E3,WD_repeat|Arabidopsis thaliana
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-0597--Phosphoprotein
KW-1185--Reference proteome
KW-0677--Repeat
KW-0698--rRNA processing
KW-0853--WD repeat
Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
Pfam

PF00400--WD40
SMART

SM00320--WD40
Gene Ontology

GO:0080008--C:Cul4-RING E3 ubiquitin ligase complex
GO:0034388--C:Pwp2p-containing subcomplex of 90S preribosome
GO:0032040--C:small-subunit processome
GO:0000462--P:maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
KEGG ath:AT5G14050
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000184 Aegilops tauschii 61.51 1.00e-174 605.00
IUUC-Aml-002252 Ailuropoda melanoleuca 43.64 2.00e-74 273.00
IUUC-Atr-002575 Amborella trichopoda 54.61 4.00e-172 597.00
IUUC-Aly-006512 Arabidopsis lyrata 94.14 0.00e+00 924.00
IUUC-Ago-007895 Ashbya gossypii 29.20 5.00e-44 171.00
IUUC-Acl-008343 Aspergillus clavatus 27.12 2.00e-47 182.00
IUUC-Afl-008445 Aspergillus flavus 28.51 1.00e-51 196.00
IUUC-Aor-009986 Aspergillus oryzae 28.73 7.00e-51 194.00
IUUC-Ame-011338 Astyanax mexicanus 40.31 5.00e-71 261.00
IUUC-Bgr-012201 Blumeria graminis 28.17 1.00e-44 174.00
IUUC-Bta-013058 Bos taurus 43.64 6.00e-74 271.00
IUUC-Bci-013619 Botrytis cinerea 26.29 2.00e-42 166.00
IUUC-Bdi-014771 Brachypodium distachyon 60.84 2.00e-168 585.00
IUUC-Bol-015230 Brassica oleracea 78.39 0.00e+00 754.00
IUUC-Bra-017041 Brassica rapa 76.92 0.00e+00 740.00
IUUC-Cel-018293 Caenorhabditis elegans 25.57 8.00e-41 160.00
IUUC-Cja-019503 Callithrix jacchus 44.55 3.00e-74 271.00
IUUC-Cfa-020743 Canis familiaris 43.64 5.00e-74 271.00
IUUC-Cpo-021488 Cavia porcellus 44.10 1.00e-73 269.00
IUUC-Cre-022926 Chlamydomonas reinhardtii 42.02 1.00e-78 286.00
IUUC-Csa-023110 Chlorocebus sabaeus 43.33 3.00e-73 268.00
IUUC-Cin-025208 Ciona intestinalis 38.82 3.00e-66 244.00
IUUC-Cme-027351 Cyanidioschyzon merolae 30.90 4.00e-49 188.00
IUUC-Dre-027524 Danio rerio 31.26 8.00e-61 227.00
IUUC-Dno-029243 Dasypus novemcinctus 43.03 6.00e-71 261.00
IUUC-Dor-030110 Dipodomys ordii 43.59 2.00e-72 266.00
IUUC-Dse-031217 Dothistroma septosporum 28.07 3.00e-42 166.00
IUUC-Dme-031999 Drosophila melanogaster 29.79 3.00e-46 179.00
IUUC-Eca-034350 Equus caballus 40.00 6.00e-73 267.00
IUUC-Eeu-034991 Erinaceus europaeus 43.81 3.00e-71 262.00
IUUC-Fal-036614 Ficedula albicollis 40.68 9.00e-67 247.00
IUUC-Gmo-039183 Gadus morhua 38.74 5.00e-70 257.00
IUUC-Gga-040922 Gallus gallus 37.20 4.00e-70 258.00
IUUC-Gac-041475 Gasterosteus aculeatus 35.80 2.00e-64 239.00
IUUC-Gma-043598 Glycine max 63.41 0.00e+00 672.00
IUUC-Ggo-044517 Gorilla gorilla 44.24 2.00e-74 273.00
IUUC-Hsa-045741 Homo sapiens 44.24 3.00e-74 272.00
IUUC-Hvu-047463 Hordeum vulgare 63.22 7.00e-62 228.00
IUUC-Itr-048128 Ictidomys tridecemlineatus 42.55 1.00e-72 266.00
IUUC-Kpa-049335 Komagataella pastoris 32.06 1.00e-54 206.00
IUUC-Lch-049816 Latimeria chalumnae 40.62 2.00e-69 255.00
IUUC-Lpe-051140 Leersia perrieri 61.98 1.00e-173 602.00
IUUC-Loc-051942 Lepisosteus oculatus 39.47 1.00e-64 239.00
IUUC-Laf-054245 Loxodonta africana 43.84 6.00e-73 267.00
IUUC-Meu-056300 Macropus eugenii 38.20 2.00e-58 218.00
IUUC-Mor-057184 Magnaporthe oryzae 28.72 8.00e-33 134.00
IUUC-Mtr-058019 Medicago truncatula 61.01 0.00e+00 648.00
IUUC-Mga-060179 Meleagris gallopavo 37.66 4.00e-70 258.00
IUUC-Mvi-060435 Microbotryum violaceum 38.53 4.00e-65 242.00
IUUC-Mdo-062187 Monodelphis domestica 40.96 2.00e-66 246.00
IUUC-Mmu-063386 Mus musculus 37.35 7.00e-73 267.00
IUUC-Mpu-066084 Mustela putorius furo 44.27 4.00e-73 268.00
IUUC-Mlu-068130 Myotis lucifugus 43.03 1.00e-72 266.00
IUUC-Nle-069743 Nomascus leucogenys 39.05 2.00e-61 229.00
IUUC-Opr-071111 Ochotona princeps 43.61 7.00e-74 270.00
IUUC-Ont-071979 Oreochromis niloticus 36.50 1.00e-69 256.00
IUUC-Ocu-073754 Oryctolagus cuniculus 45.37 2.00e-76 279.00
IUUC-Oba-075007 Oryza barthii 61.40 1.00e-169 589.00
IUUC-Obr-076447 Oryza brachyantha 61.81 2.00e-172 598.00
IUUC-Ogl-077733 Oryza glaberrima 61.40 1.00e-169 589.00
IUUC-Ogu-078828 Oryza glumaepatula 61.40 3.00e-170 590.00
IUUC-Oin-080152 Oryza indica 61.19 7.00e-170 589.00
IUUC-Olo-080983 Oryza longistaminata 60.78 1.00e-169 588.00
IUUC-Oni-082443 Oryza nivara 61.19 8.00e-170 589.00
IUUC-Opu-083771 Oryza punctata 61.81 1.00e-164 572.00
IUUC-Oru-084272 Oryza rufipogon 61.19 8.00e-170 589.00
IUUC-Osa-085885 Oryza sativa 61.19 2.00e-170 591.00
IUUC-Olu-087644 Ostreococcus lucimarinus 24.31 4.00e-29 121.00
IUUC-Oga-088834 Otolemur garnettii 43.64 4.00e-74 271.00
IUUC-Oar-089712 Ovis aries 40.69 7.00e-74 270.00
IUUC-Pan-092561 Papio anubis 43.94 1.00e-73 270.00
IUUC-Ppa-095397 Physcomitrella patens 50.46 3.00e-120 424.00
IUUC-Pfo-097068 Poecilia formosa 34.43 1.00e-66 246.00
IUUC-Pop-099471 Populus trichocarpa 68.71 0.00e+00 632.00
IUUC-Ppe-101446 Prunus persica 67.87 0.00e+00 662.00
IUUC-Pva-102851 Pteropus vampyrus 41.34 1.00e-66 246.00
IUUC-Pgr-103370 Puccinia graminis 34.81 5.00e-65 241.00
IUUC-Ptt-103838 Puccinia triticina 33.26 7.00e-58 217.00
IUUC-Rno-104910 Rattus norvegicus 39.26 4.00e-73 268.00
IUUC-Sce-106258 Saccharomyces cerevisiae 31.71 8.00e-51 194.00
IUUC-Sja-107746 Schizosaccharomyces japonicus 29.25 2.00e-62 232.00
IUUC-Spo-108268 Schizosaccharomyces pombe 32.78 1.00e-64 239.00
IUUC-Smo-108815 Selaginella moellendorffii 48.37 9.00e-127 446.00
IUUC-Sit-109706 Setaria italica 60.89 2.00e-171 595.00
IUUC-Sly-111533 Solanum lycopersicum 65.22 0.00e+00 652.00
IUUC-Stu-112853 Solanum tuberosum 66.07 0.00e+00 659.00
IUUC-Sbi-114747 Sorghum bicolor 57.62 6.00e-177 613.00
IUUC-Ssc-115916 Sus scrofa 43.38 9.00e-73 267.00
IUUC-Tgu-117291 Taeniopygia guttata 39.38 1.00e-64 239.00
IUUC-Tru-118724 Takifugu rubripes 38.42 1.00e-70 259.00
IUUC-Tsy-118928 Tarsius syrichta 45.83 3.00e-50 192.00
IUUC-Tca-121229 Theobroma cacao 68.19 0.00e+00 681.00
IUUC-Tae-123598 Triticum aestivum 61.54 5.00e-180 623.00
IUUC-Tur-126082 Triticum urartu 51.40 3.00e-97 348.00
IUUC-Ttr-128904 Tursiops truncatus 44.48 3.00e-62 232.00
IUUC-Vpa-130817 Vicugna pacos 43.16 3.00e-74 271.00
IUUC-Vvi-131395 Vitis vinifera 64.17 0.00e+00 693.00
IUUC-Xtr-132971 Xenopus tropicalis 37.97 3.00e-78 285.00
IUUC-Xma-133391 Xiphophorus maculatus 36.92 3.00e-66 245.00
IUUC-Yli-134613 Yarrowia lipolytica 29.15 3.00e-51 195.00
Created Date 25-Jun-2017

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