iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tru-118724

Ensembl Protein ID

ENSTRUP00000001049.1

UniProt Accession

H2RLN6; H2RLN6_TAKRU

Protein Name

Uncharacterized protein

Gene Name

utp18

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSTRUG00000000442.1	ENSTRUT00000001051.1	ENSTRUP00000001048.1
ENSTRUG00000000442.1	ENSTRUT00000001052.1	ENSTRUP00000001049.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.40e-07	31.2	347	380

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 5    svtclaf.sd.tllvsGsdDgtikvWDlrtgvll 36
           +v ++af  d + + + sd g ++vWD+r+ +++
   Q: 347  DVGAVAFsRDgGKIFALSDEGEVYVWDMRSRRCV 380
           5668999977899****************99986 PP

Organism

Takifugu rubripes

Protein Sequence
(Fasta)

MKLPAEDRPD PPAQSRRRAA PLEPGGEQRK RQKNACLVAA LAEEQRSVKM LEELVFGAEE 60
QLLGRLGQVG QEEEPQSEML VGGPEDEDLG QSEGETQQQP IRKAVWVDED DELEEEHAHV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTGATGAAGC TTCCGGCCGA GGACAGACCC GACCCCCCCG CCCAGAGCAG GAGGCGCGCG 60
GCGCCGCTGG AGCCCGGCGG GGAGCAGCGG AAGCGGCAGA AGAACGCGTG TCTGGTGGCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

SMART

SM00320--WD40

Gene Ontology

GO:0034388--C:Pwp2p-containing subcomplex of 90S preribosome
GO:0032040--C:small-subunit processome
GO:0000462--P:maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000184	Aegilops tauschii	36.47	9.00e-69	254.00
IUUC-Aml-002252	Ailuropoda melanoleuca	48.99	1.00e-124	439.00
IUUC-Atr-002575	Amborella trichopoda	39.53	8.00e-73	268.00
IUUC-Aly-006512	Arabidopsis lyrata	38.24	9.00e-71	261.00
IUUC-Ath-007244	Arabidopsis thaliana	38.53	4.00e-70	258.00
IUUC-Ago-007895	Ashbya gossypii	27.60	2.00e-31	130.00
IUUC-Acl-008343	Aspergillus clavatus	27.93	7.00e-27	115.00
IUUC-Afl-008445	Aspergillus flavus	26.33	5.00e-32	132.00
IUUC-Aor-009986	Aspergillus oryzae	26.93	2.00e-31	130.00
IUUC-Ame-011338	Astyanax mexicanus	55.46	5.00e-145	507.00
IUUC-Bgr-012201	Blumeria graminis	28.13	3.00e-34	139.00
IUUC-Bta-013058	Bos taurus	50.21	2.00e-126	446.00
IUUC-Bci-013619	Botrytis cinerea	25.70	4.00e-27	115.00
IUUC-Bdi-014771	Brachypodium distachyon	36.76	9.00e-70	257.00
IUUC-Bol-015230	Brassica oleracea	39.53	6.00e-70	258.00
IUUC-Bra-017041	Brassica rapa	39.53	2.00e-68	253.00
IUUC-Cel-018293	Caenorhabditis elegans	28.99	2.00e-51	196.00
IUUC-Cja-019503	Callithrix jacchus	52.03	7.00e-126	444.00
IUUC-Cfa-020743	Canis familiaris	49.38	8.00e-127	447.00
IUUC-Cpo-021488	Cavia porcellus	48.68	1.00e-125	443.00
IUUC-Cre-022926	Chlamydomonas reinhardtii	35.20	5.00e-61	228.00
IUUC-Csa-023110	Chlorocebus sabaeus	50.91	1.00e-125	443.00
IUUC-Cin-025208	Ciona intestinalis	41.54	1.00e-75	276.00
IUUC-Cme-027351	Cyanidioschyzon merolae	31.32	1.00e-39	157.00
IUUC-Dre-027524	Danio rerio	46.46	8.00e-115	407.00
IUUC-Dno-029243	Dasypus novemcinctus	49.69	4.00e-126	445.00
IUUC-Dor-030110	Dipodomys ordii	52.25	9.00e-119	420.00
IUUC-Dse-031217	Dothistroma septosporum	26.16	3.00e-23	103.00
IUUC-Dme-031999	Drosophila melanogaster	32.31	1.00e-59	224.00
IUUC-Eca-034350	Equus caballus	49.30	7.00e-128	450.00
IUUC-Eeu-034991	Erinaceus europaeus	48.56	6.00e-117	414.00
IUUC-Fal-036614	Ficedula albicollis	48.75	1.00e-120	426.00
IUUC-Gmo-039183	Gadus morhua	74.55	8.00e-153	533.00
IUUC-Gga-040922	Gallus gallus	51.76	5.00e-132	464.00
IUUC-Gac-041475	Gasterosteus aculeatus	63.38	1.00e-162	566.00
IUUC-Gma-043598	Glycine max	38.64	7.00e-74	271.00
IUUC-Ggo-044517	Gorilla gorilla	49.40	9.00e-127	447.00
IUUC-Hsa-045741	Homo sapiens	50.00	4.00e-127	448.00
IUUC-Hvu-047463	Hordeum vulgare	34.86	7.00e-30	123.00
IUUC-Itr-048128	Ictidomys tridecemlineatus	49.79	2.00e-124	439.00
IUUC-Kpa-049335	Komagataella pastoris	30.70	1.00e-40	160.00
IUUC-Lch-049816	Latimeria chalumnae	60.58	1.00e-133	469.00
IUUC-Lpe-051140	Leersia perrieri	36.76	9.00e-69	254.00
IUUC-Loc-051942	Lepisosteus oculatus	53.76	4.00e-148	518.00
IUUC-Laf-054245	Loxodonta africana	50.41	6.00e-128	451.00
IUUC-Meu-056300	Macropus eugenii	51.99	6.00e-114	404.00
IUUC-Mor-057184	Magnaporthe oryzae	25.59	7.00e-27	115.00
IUUC-Mtr-058019	Medicago truncatula	40.24	1.00e-72	266.00
IUUC-Mga-060179	Meleagris gallopavo	57.94	2.00e-131	461.00
IUUC-Mvi-060435	Microbotryum violaceum	30.99	2.00e-46	180.00
IUUC-Mdo-062187	Monodelphis domestica	54.88	8.00e-125	440.00
IUUC-Mmu-063386	Mus musculus	56.23	6.00e-126	444.00
IUUC-Mpu-066084	Mustela putorius furo	55.44	8.00e-125	440.00
IUUC-Mlu-068130	Myotis lucifugus	49.79	3.00e-127	448.00
IUUC-Nle-069743	Nomascus leucogenys	46.56	2.00e-112	399.00
IUUC-Opr-071111	Ochotona princeps	59.12	7.00e-119	421.00
IUUC-Ont-071979	Oreochromis niloticus	69.80	0.00e+00	633.00
IUUC-Ocu-073754	Oryctolagus cuniculus	51.47	2.00e-123	435.00
IUUC-Oba-075007	Oryza barthii	37.35	2.00e-69	257.00
IUUC-Obr-076447	Oryza brachyantha	37.46	1.00e-70	260.00
IUUC-Ogl-077733	Oryza glaberrima	37.35	1.00e-69	256.00
IUUC-Ogu-078828	Oryza glumaepatula	37.35	2.00e-69	257.00
IUUC-Oin-080152	Oryza indica	37.06	3.00e-69	256.00
IUUC-Olo-080983	Oryza longistaminata	37.65	8.00e-70	258.00
IUUC-Oni-082443	Oryza nivara	37.06	4.00e-69	255.00
IUUC-Opu-083771	Oryza punctata	37.65	4.00e-70	258.00
IUUC-Oru-084272	Oryza rufipogon	37.06	4.00e-69	255.00
IUUC-Osa-085885	Oryza sativa	37.06	2.00e-69	256.00
IUUC-Olu-087644	Ostreococcus lucimarinus	26.52	2.00e-23	103.00
IUUC-Oga-088834	Otolemur garnettii	52.38	7.00e-130	457.00
IUUC-Oar-089712	Ovis aries	52.48	3.00e-126	445.00
IUUC-Pan-092561	Papio anubis	49.90	2.00e-124	439.00
IUUC-Ppa-095397	Physcomitrella patens	42.73	2.00e-77	283.00
IUUC-Pfo-097068	Poecilia formosa	65.34	1.00e-177	615.00
IUUC-Pop-099471	Populus trichocarpa	39.35	1.00e-62	234.00
IUUC-Ppe-101446	Prunus persica	41.16	3.00e-72	266.00
IUUC-Pva-102851	Pteropus vampyrus	48.69	3.00e-120	425.00
IUUC-Pgr-103370	Puccinia graminis	28.53	3.00e-42	166.00
IUUC-Ptt-103838	Puccinia triticina	28.01	3.00e-39	156.00
IUUC-Rno-104910	Rattus norvegicus	55.29	3.00e-123	435.00
IUUC-Sce-106258	Saccharomyces cerevisiae	27.04	6.00e-36	145.00
IUUC-Sja-107746	Schizosaccharomyces japonicus	30.29	2.00e-48	187.00
IUUC-Spo-108268	Schizosaccharomyces pombe	33.74	6.00e-51	195.00
IUUC-Smo-108815	Selaginella moellendorffii	41.76	2.00e-77	283.00
IUUC-Sit-109706	Setaria italica	36.75	2.00e-66	246.00
IUUC-Sly-111533	Solanum lycopersicum	37.94	4.00e-71	261.00
IUUC-Stu-112853	Solanum tuberosum	38.53	4.00e-73	268.00
IUUC-Sbi-114747	Sorghum bicolor	37.05	7.00e-68	251.00
IUUC-Ssc-115916	Sus scrofa	49.58	6.00e-128	451.00
IUUC-Tgu-117291	Taeniopygia guttata	57.14	6.00e-124	437.00
IUUC-Tsy-118928	Tarsius syrichta	44.17	4.00e-96	345.00
IUUC-Tca-121229	Theobroma cacao	39.64	8.00e-74	271.00
IUUC-Tae-125218	Triticum aestivum	36.47	9.00e-69	254.00
IUUC-Tur-126082	Triticum urartu	31.76	3.00e-47	182.00
IUUC-Ttr-128904	Tursiops truncatus	43.42	3.00e-103	368.00
IUUC-Vpa-130817	Vicugna pacos	49.79	5.00e-126	444.00
IUUC-Vvi-130982	Vitis vinifera	39.53	8.00e-69	254.00
IUUC-Xtr-132971	Xenopus tropicalis	56.20	1.00e-123	436.00
IUUC-Xma-133391	Xiphophorus maculatus	66.04	2.00e-173	602.00
IUUC-Yli-134613	Yarrowia lipolytica	32.45	1.00e-47	184.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence