iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ssc-116210

Ensembl Protein ID

ENSSSCP00000006059.2

UniProt Accession

F1RR77; F1RR77_PIG

Genbank Protein ID

ENSSSCP00000006059

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CU862000

Gene Name

WDR34

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSSCG00000005655.2	ENSSSCT00000006218.2	ENSSSCP00000006059.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.20e-21	75.3	482	513

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 4    dsvtclaf...sdtllvsGsdDgtikvWDlrt 32
            +v+cl+f   ++ ll++G   gt+kvW+l+t
   Q: 482  RPVYCLEFncqQTQLLAAGDAQGTVKVWRLST 513
           68******98544899*************987 PP

Organism

Sus scrofa

Protein Sequence
(Fasta)

TCALRGQLFP AGRAGAEALA TRGIASPEGP ERPGPLQDET LGVASVPSQW RTVQGIRGET 60
KSCQTASIAT TEVSAQTWKH ADAEVQTEAP EPVSVPSSVS WSDGPGLAAF LRRVEPMVTR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACCTGCGCGC TGAGAGGGCA ACTCTTCCCG GCGGGAAGGG CGGGTGCTGA GGCGCTGGCG 60
ACCCGCGGGA TTGCGAGTCC CGAGGGGCCC GAGCGGCCCG GGCCGCTGCA GGACGAGACC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005868--C:cytoplasmic dynein complex
GO:0005829--C:cytosol
GO:0060271--P:cilium assembly

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002326	Ailuropoda melanoleuca	87.90	0.00e+00	865.00
IUUC-Apl-004015	Anas platyrhynchos	64.90	1.00e-177	615.00
IUUC-Ame-010762	Astyanax mexicanus	51.50	3.00e-143	501.00
IUUC-Bta-013392	Bos taurus	88.14	0.00e+00	896.00
IUUC-Cja-019374	Callithrix jacchus	85.40	0.00e+00	846.00
IUUC-Cfa-020365	Canis familiaris	88.09	0.00e+00	843.00
IUUC-Csa-023810	Chlorocebus sabaeus	85.40	0.00e+00	864.00
IUUC-Cho-024515	Choloepus hoffmanni	78.34	4.00e-165	573.00
IUUC-Cin-025690	Ciona intestinalis	28.93	1.00e-54	207.00
IUUC-Csv-026220	Ciona savignyi	29.25	4.00e-54	205.00
IUUC-Dre-028439	Danio rerio	50.90	4.00e-146	510.00
IUUC-Dno-029916	Dasypus novemcinctus	84.98	0.00e+00	851.00
IUUC-Dor-030853	Dipodomys ordii	81.50	0.00e+00	874.00
IUUC-Eca-033204	Equus caballus	85.68	0.00e+00	794.00
IUUC-Fca-036470	Felis catus	88.35	0.00e+00	847.00
IUUC-Fal-037484	Ficedula albicollis	63.38	0.00e+00	646.00
IUUC-Gmo-039252	Gadus morhua	48.61	1.00e-135	476.00
IUUC-Gga-040701	Gallus gallus	63.64	1.00e-168	586.00
IUUC-Gac-041440	Gasterosteus aculeatus	49.60	2.00e-138	485.00
IUUC-Ggo-044509	Gorilla gorilla	85.71	0.00e+00	844.00
IUUC-Hsa-046030	Homo sapiens	85.77	0.00e+00	845.00
IUUC-Itr-048001	Ictidomys tridecemlineatus	83.46	0.00e+00	855.00
IUUC-Lch-050603	Latimeria chalumnae	58.23	8.00e-170	589.00
IUUC-Loc-052914	Lepisosteus oculatus	51.59	2.00e-131	462.00
IUUC-Laf-053957	Loxodonta africana	80.70	0.00e+00	703.00
IUUC-Mcc-054805	Macaca mulatta	85.21	0.00e+00	865.00
IUUC-Meu-056115	Macropus eugenii	78.00	0.00e+00	802.00
IUUC-Mga-059377	Meleagris gallopavo	64.27	0.00e+00	629.00
IUUC-Mmr-061203	Microcebus murinus	85.57	0.00e+00	847.00
IUUC-Mdo-062646	Monodelphis domestica	78.40	0.00e+00	779.00
IUUC-Mmu-063156	Mus musculus	84.43	0.00e+00	831.00
IUUC-Mpu-065923	Mustela putorius furo	84.32	0.00e+00	828.00
IUUC-Mlu-067705	Myotis lucifugus	85.28	0.00e+00	883.00
IUUC-Nle-069635	Nomascus leucogenys	85.78	0.00e+00	786.00
IUUC-Opr-070939	Ochotona princeps	67.18	8.00e-147	513.00
IUUC-Ont-072205	Oreochromis niloticus	48.21	5.00e-132	464.00
IUUC-Oan-073427	Ornithorhynchus anatinus	72.46	0.00e+00	684.00
IUUC-Ocu-074234	Oryctolagus cuniculus	84.67	0.00e+00	852.00
IUUC-Ola-086461	Oryzias latipes	49.50	3.00e-139	488.00
IUUC-Oga-088616	Otolemur garnettii	88.24	0.00e+00	716.00
IUUC-Ptr-090563	Pan troglodytes	85.80	0.00e+00	848.00
IUUC-Pan-092105	Papio anubis	85.21	0.00e+00	845.00
IUUC-Psi-093169	Pelodiscus sinensis	63.29	0.00e+00	662.00
IUUC-Pma-094688	Petromyzon marinus	41.53	4.00e-91	328.00
IUUC-Pfo-096136	Poecilia formosa	50.90	3.00e-125	441.00
IUUC-Pab-098286	Pongo abelii	84.81	0.00e+00	835.00
IUUC-Pca-100577	Procavia capensis	76.74	0.00e+00	774.00
IUUC-Pva-103194	Pteropus vampyrus	86.20	0.00e+00	905.00
IUUC-Rno-105958	Rattus norvegicus	84.77	0.00e+00	851.00
IUUC-Sha-107438	Sarcophilus harrisii	79.58	0.00e+00	784.00
IUUC-Tgu-116704	Taeniopygia guttata	63.34	0.00e+00	643.00
IUUC-Tru-117530	Takifugu rubripes	46.80	1.00e-120	426.00
IUUC-Tni-120848	Tetraodon nigroviridis	45.25	3.00e-103	368.00
IUUC-Ttr-128697	Tursiops truncatus	89.77	0.00e+00	726.00
IUUC-Xtr-132843	Xenopus tropicalis	58.93	3.00e-174	604.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence