iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSRNOG00000049505.2	ENSRNOT00000080138.1	ENSRNOP00000071201.1
ENSRNOG00000049505.2	ENSRNOT00000073528.2	ENSRNOP00000066318.1

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
RAID2
Protein-protein Interaction
IID
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.20e-17	62.3	260	298

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sd.tllvsGsdDgtikvWDlrtgvllk 37
           H+++++ ++f  s+ ++l ++s Dg++  WD +t+ ++k
   Q: 260  HEAEMWEVHFhpSNpDHLFTCSEDGSLWHWDASTNAPEK 298
           99999******8778****************88877665 PP

Organism

Rattus norvegicus

Protein Sequence
(Fasta)

MEEIYAKFVS QKISKTRWRP VPSGSLQTTE TFATGSWDNE ENCVSLWSIG EFGNLDSDGG 60
FEGDHQLLCD IRHHGDVMDL QFFDQERIVA ASSTGCVTVF LHHPNNQTLS VSQQWPTAHY 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGGGGCGGGC CTGAGGAGCG CGCAGTGTGC TTTCTGCTGA ACCTTCTTGC TGGCTTCAGC 60
ATGGAGGAAA TTTATGCTAA GTTCGTGTCT CAGAAAATTA GCAAAACCCG CTGGCGGCCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

SMART

SM00320--WD40

Gene Ontology

GO:0000776--C:kinetochore
GO:0031080--C:nuclear pore outer ring

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001593	Ailuropoda melanoleuca	92.37	0.00e+00	691.00
IUUC-Atr-002526	Amborella trichopoda	26.83	2.00e-10	60.10
IUUC-Apl-003533	Anas platyrhynchos	73.65	4.00e-138	484.00
IUUC-Aca-004965	Anolis carolinensis	70.18	2.00e-158	551.00
IUUC-Aly-006431	Arabidopsis lyrata	30.18	5.00e-14	72.00
IUUC-Ath-007253	Arabidopsis thaliana	30.36	6.00e-14	71.60
IUUC-Ame-011694	Astyanax mexicanus	62.50	2.00e-119	421.00
IUUC-Bta-013161	Bos taurus	91.32	0.00e+00	719.00
IUUC-Bdi-014758	Brachypodium distachyon	26.94	3.00e-12	65.90
IUUC-Bra-017838	Brassica rapa	27.27	9.00e-08	51.20
IUUC-Cja-020000	Callithrix jacchus	79.84	3.00e-175	607.00
IUUC-Cfa-021112	Canis familiaris	92.37	0.00e+00	726.00
IUUC-Cpo-022095	Cavia porcellus	89.21	0.00e+00	689.00
IUUC-Csa-023460	Chlorocebus sabaeus	92.63	0.00e+00	701.00
IUUC-Cho-024279	Choloepus hoffmanni	90.59	4.00e-171	593.00
IUUC-Cin-025360	Ciona intestinalis	35.89	3.00e-60	225.00
IUUC-Csv-026301	Ciona savignyi	36.51	2.00e-52	199.00
IUUC-Dre-028097	Danio rerio	62.07	9.00e-136	476.00
IUUC-Dno-029131	Dasypus novemcinctus	91.03	0.00e+00	712.00
IUUC-Dor-030496	Dipodomys ordii	81.89	0.00e+00	626.00
IUUC-Dme-031834	Drosophila melanogaster	27.81	2.00e-42	166.00
IUUC-Ete-032448	Echinops telfairi	89.14	1.00e-165	575.00
IUUC-Eca-034409	Equus caballus	91.05	0.00e+00	713.00
IUUC-Eeu-035343	Erinaceus europaeus	76.05	2.00e-152	531.00
IUUC-Fca-036177	Felis catus	93.16	0.00e+00	730.00
IUUC-Fal-037657	Ficedula albicollis	68.60	1.00e-150	525.00
IUUC-Gmo-038946	Gadus morhua	65.08	8.00e-140	489.00
IUUC-Gga-041070	Gallus gallus	73.09	4.00e-158	550.00
IUUC-Gac-042442	Gasterosteus aculeatus	65.34	3.00e-143	501.00
IUUC-Gma-043812	Glycine max	26.41	7.00e-13	68.20
IUUC-Ggo-045223	Gorilla gorilla	92.37	0.00e+00	728.00
IUUC-Hsa-045956	Homo sapiens	92.63	0.00e+00	730.00
IUUC-Itr-048116	Ictidomys tridecemlineatus	93.96	0.00e+00	734.00
IUUC-Lch-050035	Latimeria chalumnae	69.84	3.00e-157	547.00
IUUC-Laf-053404	Loxodonta africana	88.42	0.00e+00	683.00
IUUC-Mcc-055813	Macaca mulatta	93.16	0.00e+00	705.00
IUUC-Meu-056388	Macropus eugenii	74.86	1.00e-155	542.00
IUUC-Mga-060193	Meleagris gallopavo	71.50	3.00e-164	571.00
IUUC-Mmr-060818	Microcebus murinus	92.37	0.00e+00	721.00
IUUC-Mdo-062822	Monodelphis domestica	88.68	0.00e+00	691.00
IUUC-Mmu-064182	Mus musculus	97.37	0.00e+00	758.00
IUUC-Mpu-066865	Mustela putorius furo	92.94	0.00e+00	647.00
IUUC-Mlu-067329	Myotis lucifugus	91.84	0.00e+00	678.00
IUUC-Nle-069093	Nomascus leucogenys	93.16	0.00e+00	731.00
IUUC-Opr-070481	Ochotona princeps	83.73	0.00e+00	646.00
IUUC-Ont-072445	Oreochromis niloticus	65.61	3.00e-144	504.00
IUUC-Oan-073029	Ornithorhynchus anatinus	76.05	4.00e-167	580.00
IUUC-Ocu-074275	Oryctolagus cuniculus	91.58	0.00e+00	718.00
IUUC-Ola-086862	Oryzias latipes	62.96	5.00e-130	457.00
IUUC-Oga-088952	Otolemur garnettii	92.35	0.00e+00	723.00
IUUC-Oar-089300	Ovis aries	92.11	0.00e+00	724.00
IUUC-Ptr-091389	Pan troglodytes	92.89	0.00e+00	731.00
IUUC-Pan-092174	Papio anubis	92.89	0.00e+00	702.00
IUUC-Psi-093326	Pelodiscus sinensis	75.88	2.00e-158	551.00
IUUC-Pfo-096331	Poecilia formosa	63.81	4.00e-141	494.00
IUUC-Pab-098306	Pongo abelii	92.63	0.00e+00	729.00
IUUC-Pop-099166	Populus trichocarpa	31.91	1.00e-11	63.90
IUUC-Pca-100455	Procavia capensis	89.33	2.00e-78	286.00
IUUC-Ppe-101380	Prunus persica	28.00	5.00e-13	68.60
IUUC-Pva-102578	Pteropus vampyrus	92.89	0.00e+00	691.00
IUUC-Sha-107640	Sarcophilus harrisii	89.24	0.00e+00	698.00
IUUC-Sar-113681	Sorex araneus	91.84	1.00e-103	369.00
IUUC-Sbi-113809	Sorghum bicolor	25.79	1.00e-06	47.00
IUUC-Ssc-116129	Sus scrofa	91.58	0.00e+00	695.00
IUUC-Tgu-117456	Taeniopygia guttata	66.67	1.00e-78	285.00
IUUC-Tru-117630	Takifugu rubripes	66.53	2.00e-97	348.00
IUUC-Tsy-119331	Tarsius syrichta	93.42	0.00e+00	734.00
IUUC-Tni-120077	Tetraodon nigroviridis	64.02	9.00e-134	469.00
IUUC-Tca-121814	Theobroma cacao	30.64	5.00e-10	58.90
IUUC-Tae-123605	Triticum aestivum	27.37	3.00e-12	65.90
IUUC-Tbe-127359	Tupaia belangeri	83.78	0.00e+00	637.00
IUUC-Ttr-128461	Tursiops truncatus	93.42	0.00e+00	702.00
IUUC-Vpa-130162	Vicugna pacos	93.42	0.00e+00	697.00
IUUC-Vvi-131114	Vitis vinifera	28.18	5.00e-11	61.60
IUUC-Xtr-132446	Xenopus tropicalis	68.60	3.00e-152	530.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence