iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Psi-093526

Ensembl Protein ID

ENSPSIP00000008488.1

UniProt Accession

K7FKC8; K7FKC8_PELSI

Genbank Protein ID

ENSPSIP00000008488

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AGCU01100096

Gene Name

WDR78

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPSIG00000007768.1	ENSPSIT00000008532.1	ENSPSIP00000008488.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.00e-10	39.6	667	697

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf...sdtllvsGsdDgtikvWD 29
           H+++v+ +a+   s+++++s+s D +i +W+
   Q: 667  HKGPVYKIAWnpfSTDMFLSCSADWSIILWS 697
           9***********877*********9999998 PP

Organism

Pelodiscus sinensis

Protein Sequence
(Fasta)

MKRTSVSFIG SQKQMSYISG FNPSRVGSLS RRSLLMASDG KTVDKGSLIG SRHTIQIFDE 60
QGKDVTPHPL YRPEPSASLH RQSKILSAQD ISGATGSDFL SSLSIHQTSG VNASLVGPFS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAAGAGGA CATCTGTTTC TTTTATTGGC AGCCAAAAAC AAATGAGCTA CATTAGTGGT 60
TTCAATCCAA GTAGAGTGGG ATCATTGAGT CGAAGAAGCT TGCTGATGGC TTCTGATGGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0002244--P:hematopoietic progenitor cell differentiation

KEGG

pss:102453153

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002359	Ailuropoda melanoleuca	56.13	0.00e+00	818.00
IUUC-Apl-004037	Anas platyrhynchos	63.36	0.00e+00	945.00
IUUC-Aca-004686	Anolis carolinensis	66.58	0.00e+00	1011.00
IUUC-Ame-010641	Astyanax mexicanus	47.41	0.00e+00	676.00
IUUC-Bta-012779	Bos taurus	56.45	0.00e+00	868.00
IUUC-Cja-019217	Callithrix jacchus	58.00	0.00e+00	865.00
IUUC-Cfa-020613	Canis familiaris	55.45	0.00e+00	847.00
IUUC-Cpo-022374	Cavia porcellus	56.13	0.00e+00	885.00
IUUC-Cre-022690	Chlamydomonas reinhardtii	42.46	7.00e-75	275.00
IUUC-Csa-023471	Chlorocebus sabaeus	54.26	0.00e+00	853.00
IUUC-Cho-024485	Choloepus hoffmanni	48.85	0.00e+00	678.00
IUUC-Cin-025295	Ciona intestinalis	44.04	3.00e-180	625.00
IUUC-Csv-025888	Ciona savignyi	44.86	1.00e-178	619.00
IUUC-Dre-027657	Danio rerio	47.01	0.00e+00	710.00
IUUC-Dno-029422	Dasypus novemcinctus	71.08	1.00e-166	580.00
IUUC-Ete-032340	Echinops telfairi	52.69	2.00e-93	336.00
IUUC-Eca-033418	Equus caballus	56.04	0.00e+00	822.00
IUUC-Eeu-035088	Erinaceus europaeus	50.10	2.00e-107	382.00
IUUC-Fca-035471	Felis catus	71.20	7.00e-167	580.00
IUUC-Fal-036908	Ficedula albicollis	54.99	0.00e+00	662.00
IUUC-Gmo-038672	Gadus morhua	41.05	2.00e-94	339.00
IUUC-Gga-040422	Gallus gallus	57.57	0.00e+00	907.00
IUUC-Gac-042448	Gasterosteus aculeatus	41.48	1.00e-171	596.00
IUUC-Ggo-045567	Gorilla gorilla	58.48	0.00e+00	842.00
IUUC-Hsa-046857	Homo sapiens	57.54	0.00e+00	874.00
IUUC-Itr-048176	Ictidomys tridecemlineatus	70.00	5.00e-163	566.00
IUUC-Lch-050496	Latimeria chalumnae	57.32	0.00e+00	901.00
IUUC-Loc-052759	Lepisosteus oculatus	56.48	0.00e+00	847.00
IUUC-Laf-053515	Loxodonta africana	57.76	0.00e+00	884.00
IUUC-Mcc-054741	Macaca mulatta	57.13	0.00e+00	891.00
IUUC-Meu-056698	Macropus eugenii	69.04	1.00e-128	453.00
IUUC-Mga-059689	Meleagris gallopavo	62.42	0.00e+00	885.00
IUUC-Mmr-061641	Microcebus murinus	55.47	0.00e+00	641.00
IUUC-Mdo-061968	Monodelphis domestica	55.47	0.00e+00	858.00
IUUC-Mmu-063908	Mus musculus	55.71	0.00e+00	810.00
IUUC-Mpu-065957	Mustela putorius furo	55.40	0.00e+00	805.00
IUUC-Mlu-067454	Myotis lucifugus	55.49	0.00e+00	865.00
IUUC-Nle-069312	Nomascus leucogenys	57.97	0.00e+00	881.00
IUUC-Opr-070363	Ochotona princeps	48.42	0.00e+00	715.00
IUUC-Ont-072322	Oreochromis niloticus	38.86	2.00e-156	546.00
IUUC-Oan-073666	Ornithorhynchus anatinus	60.43	0.00e+00	872.00
IUUC-Ocu-074719	Oryctolagus cuniculus	58.90	0.00e+00	921.00
IUUC-Ola-087351	Oryzias latipes	46.10	2.00e-84	305.00
IUUC-Olu-087835	Ostreococcus lucimarinus	29.61	7.00e-43	167.00
IUUC-Oga-088476	Otolemur garnettii	54.32	0.00e+00	794.00
IUUC-Oar-089261	Ovis aries	56.48	0.00e+00	836.00
IUUC-Pan-091774	Papio anubis	57.11	0.00e+00	887.00
IUUC-Pma-094755	Petromyzon marinus	50.61	1.00e-74	272.00
IUUC-Ppa-095355	Physcomitrella patens	45.51	2.00e-39	155.00
IUUC-Pfo-096510	Poecilia formosa	38.89	4.00e-139	488.00
IUUC-Pab-098218	Pongo abelii	57.54	0.00e+00	875.00
IUUC-Pva-102551	Pteropus vampyrus	65.16	6.00e-148	518.00
IUUC-Rno-105674	Rattus norvegicus	55.07	0.00e+00	851.00
IUUC-Sha-107552	Sarcophilus harrisii	56.70	0.00e+00	870.00
IUUC-Smo-109353	Selaginella moellendorffii	43.79	2.00e-71	261.00
IUUC-Sar-113136	Sorex araneus	70.16	4.00e-161	561.00
IUUC-Ssc-116203	Sus scrofa	61.35	0.00e+00	755.00
IUUC-Tgu-117141	Taeniopygia guttata	53.61	0.00e+00	663.00
IUUC-Tni-119670	Tetraodon nigroviridis	34.69	5.00e-110	391.00
IUUC-Tbe-127913	Tupaia belangeri	54.75	0.00e+00	669.00
IUUC-Ttr-128515	Tursiops truncatus	55.98	0.00e+00	741.00
IUUC-Vpa-130560	Vicugna pacos	60.11	1.00e-141	496.00
IUUC-Xtr-131755	Xenopus tropicalis	52.93	0.00e+00	818.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence