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Basic Information Integrated Annotations
Tag Content
UUCD2 ID IUUC-Cel-018699
UUCD1 version UUC-CaE-00308
Ensembl Protein ID F32H2.4
UniProt Accession P91867; P91867_CAEEL
Genbank Protein ID CAB04240.3
Protein Name THO Complex (Transcription factor/nuclear export) subunit
Genbank Nucleotide ID BX284601
Gene Name thoc-3; CELE_F32H2.4; F32H2.4
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
WBGene00009341 F32H2.4 F32H2.4
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
Protein Expression/Proteomics
GPMDB
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 2.40e-19 69.0 79 116
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD
   S: 2    Htdsvtclaf....sdtllvsGsdDgtikvWDlrtgvll 36
           H++sv  +a     + +l++s+s D +i vWD+r+ +++
   Q: 79   HSSSVEQVACsekqP-NLFASASADRNICVWDIRQSKPT 116
           99*******999644.9****************998876 PP
   
Organism Caenorhabditis elegans
Protein Sequence
(Fasta)
MTVSSRERRC ARLLTAADAS TYFEKYKRIR STDMKVQQCQ SIAFNCDGTK LVCGAFDKKV 60
SVANVDGGRL RFSWVGSSHS SSVEQVACSE KQPNLFASAS ADRNICVWDI RQSKPTHRIS 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Cel-018699|E3,WD_repeat|Caenorhabditis elegans
Please wait for a moment...
Nucleotide Sequence
(Fasta)
AGATGACAGT GTCTTCCCGA GAACGACGAT GTGCACGTCT GTTAACGGCA GCTGATGCTT 60
CGACATATTT TGAAAAGTAC AAAAGAATCA GATCAACCGA TATGAAGGTA TACCTAAAGA 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Cel-018699|E3,WD_repeat|Caenorhabditis elegans
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0853--WD repeat
Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom
PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
Pfam

PF00400--WD40
SMART

SM00320--WD40
Gene Ontology

GO:0000347--C:THO complex
GO:0000445--C:THO complex part of transcription export complex
GO:0006406--P:mRNA export from nucleus
KEGG cel:CELE_F32H2.4
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000099 Aegilops tauschii 29.03 2.00e-30 124.00
IUUC-Aml-001264 Ailuropoda melanoleuca 33.98 2.00e-47 181.00
IUUC-Atr-003050 Amborella trichopoda 29.64 1.00e-34 139.00
IUUC-Apl-003426 Anas platyrhynchos 32.27 2.00e-34 137.00
IUUC-Aca-004931 Anolis carolinensis 35.27 3.00e-33 133.00
IUUC-Aly-006237 Arabidopsis lyrata 29.39 6.00e-36 143.00
IUUC-Ath-007581 Arabidopsis thaliana 29.39 2.00e-36 144.00
IUUC-Acl-008253 Aspergillus clavatus 25.45 4.00e-22 97.40
IUUC-Afl-008519 Aspergillus flavus 27.36 7.00e-25 106.00
IUUC-Afu-008886 Aspergillus fumigatus 25.36 5.00e-20 90.90
IUUC-Ani-009275 Aspergillus nidulans 26.80 1.00e-26 112.00
IUUC-Ang-009862 Aspergillus niger 27.18 3.00e-24 104.00
IUUC-Ate-010247 Aspergillus terreus 25.08 5.00e-22 97.10
IUUC-Ame-010828 Astyanax mexicanus 33.75 5.00e-47 179.00
IUUC-Bgr-012163 Blumeria graminis 26.34 2.00e-22 98.20
IUUC-Bta-013514 Bos taurus 33.33 4.00e-43 167.00
IUUC-Bci-013639 Botrytis cinerea 25.70 8.00e-26 109.00
IUUC-Bdi-015049 Brachypodium distachyon 27.62 3.00e-28 117.00
IUUC-Bol-015401 Brassica oleracea 31.12 9.00e-34 135.00
IUUC-Bra-017867 Brassica rapa 31.12 9.00e-34 135.00
IUUC-Cja-019591 Callithrix jacchus 34.30 2.00e-47 181.00
IUUC-Cfa-020692 Canis familiaris 33.98 2.00e-47 181.00
IUUC-Cpo-022135 Cavia porcellus 32.06 6.00e-37 146.00
IUUC-Cre-022572 Chlamydomonas reinhardtii 28.62 8.00e-24 103.00
IUUC-Csa-023408 Chlorocebus sabaeus 33.98 4.00e-47 180.00
IUUC-Cho-024340 Choloepus hoffmanni 33.65 3.00e-27 113.00
IUUC-Cin-025418 Ciona intestinalis 43.65 5.00e-26 108.00
IUUC-Csv-026130 Ciona savignyi 30.79 4.00e-44 170.00
IUUC-Cgl-026744 Colletotrichum gloeosporioides 28.11 2.00e-27 115.00
IUUC-Dre-028634 Danio rerio 33.75 1.00e-47 182.00
IUUC-Dno-029449 Dasypus novemcinctus 33.98 2.00e-47 181.00
IUUC-Dor-030301 Dipodomys ordii 27.52 1.00e-25 108.00
IUUC-Dse-031341 Dothistroma septosporum 25.00 6.00e-19 87.00
IUUC-Dme-031674 Drosophila melanogaster 31.76 5.00e-43 166.00
IUUC-Ete-033136 Echinops telfairi 33.66 3.00e-47 181.00
IUUC-Eca-034432 Equus caballus 34.94 3.00e-41 160.00
IUUC-Fca-035694 Felis catus 33.98 2.00e-47 181.00
IUUC-Fal-037328 Ficedula albicollis 33.66 8.00e-46 176.00
IUUC-Fox-037894 Fusarium oxysporum 26.16 9.00e-27 112.00
IUUC-Fso-038266 Fusarium solani 25.31 2.00e-25 108.00
IUUC-Gmo-039617 Gadus morhua 34.30 7.00e-48 182.00
IUUC-Ggr-039819 Gaeumannomyces graminis 25.35 8.00e-21 93.20
IUUC-Gga-041164 Gallus gallus 33.33 1.00e-44 172.00
IUUC-Gac-042407 Gasterosteus aculeatus 33.98 7.00e-48 182.00
IUUC-Gma-043718 Glycine max 28.57 5.00e-35 140.00
IUUC-Ggo-044989 Gorilla gorilla 33.98 4.00e-47 180.00
IUUC-Hsa-046784 Homo sapiens 33.98 4.00e-47 180.00
IUUC-Hvu-047633 Hordeum vulgare 29.48 1.00e-21 95.10
IUUC-Itr-048184 Ictidomys tridecemlineatus 22.96 3.00e-20 91.30
IUUC-Lch-049894 Latimeria chalumnae 34.52 2.00e-48 184.00
IUUC-Lpe-051061 Leersia perrieri 25.62 9.00e-21 92.40
IUUC-Loc-052424 Lepisosteus oculatus 34.08 3.00e-48 184.00
IUUC-Lma-053127 Leptosphaeria maculans 29.02 1.00e-29 123.00
IUUC-Laf-053396 Loxodonta africana 34.30 8.00e-48 182.00
IUUC-Mcc-055517 Macaca mulatta 33.98 4.00e-47 180.00
IUUC-Meu-056034 Macropus eugenii 33.66 2.00e-47 181.00
IUUC-Mpo-057490 Magnaporthe poae 25.35 1.00e-20 92.40
IUUC-Mtr-057927 Medicago truncatula 29.29 6.00e-36 143.00
IUUC-Mla-058945 Melampsora laricipopulina 26.44 9.00e-24 102.00
IUUC-Mga-060155 Meleagris gallopavo 33.61 5.00e-35 139.00
IUUC-Mvi-060344 Microbotryum violaceum 27.81 2.00e-26 111.00
IUUC-Mmr-060834 Microcebus murinus 34.30 5.00e-48 183.00
IUUC-Mdo-062587 Monodelphis domestica 33.98 1.00e-47 182.00
IUUC-Mmu-063395 Mus musculus 33.98 2.00e-47 181.00
IUUC-Mac-064579 Musa acuminata 28.57 3.00e-35 140.00
IUUC-Mpu-066688 Mustela putorius furo 31.63 7.00e-40 156.00
IUUC-Mlu-067299 Myotis lucifugus 33.98 1.00e-47 182.00
IUUC-Nfi-068562 Neosartorya fischeri 25.60 1.00e-20 92.80
IUUC-Ncr-068654 Neurospora crassa 24.73 9.00e-22 96.30
IUUC-Nle-069736 Nomascus leucogenys 33.66 5.00e-46 176.00
IUUC-Ont-071763 Oreochromis niloticus 34.38 6.00e-49 186.00
IUUC-Ocu-074909 Oryctolagus cuniculus 33.98 2.00e-47 181.00
IUUC-Oba-075902 Oryza barthii 24.91 2.00e-19 88.20
IUUC-Obr-076613 Oryza brachyantha 28.01 3.00e-30 124.00
IUUC-Ogl-077009 Oryza glaberrima 28.47 5.00e-31 126.00
IUUC-Ogu-078344 Oryza glumaepatula 24.91 2.00e-19 88.20
IUUC-Oin-079773 Oryza indica 28.47 5.00e-31 126.00
IUUC-Oni-082263 Oryza nivara 24.91 2.00e-19 88.20
IUUC-Opu-083813 Oryza punctata 28.47 2.00e-31 127.00
IUUC-Oru-084610 Oryza rufipogon 24.91 2.00e-19 87.80
IUUC-Osa-085415 Oryza sativa 28.11 2.00e-30 124.00
IUUC-Ola-086659 Oryzias latipes 34.30 3.00e-48 184.00
IUUC-Olu-087649 Ostreococcus lucimarinus 33.03 2.00e-27 115.00
IUUC-Oga-087923 Otolemur garnettii 33.98 2.00e-47 181.00
IUUC-Oar-089688 Ovis aries 32.36 1.00e-43 169.00
IUUC-Ptr-091628 Pan troglodytes 33.98 4.00e-47 180.00
IUUC-Pan-092586 Papio anubis 33.97 1.00e-45 176.00
IUUC-Psi-093701 Pelodiscus sinensis 34.92 3.00e-31 127.00
IUUC-Pma-094465 Petromyzon marinus 33.23 8.00e-47 179.00
IUUC-Pno-094767 Phaeosphaeria nodorum 29.52 1.00e-28 120.00
IUUC-Ppa-095195 Physcomitrella patens 29.39 5.00e-36 143.00
IUUC-Pfo-097383 Poecilia formosa 34.63 1.00e-48 186.00
IUUC-Pab-098669 Pongo abelii 33.98 4.00e-47 180.00
IUUC-Pop-099409 Populus trichocarpa 29.29 2.00e-36 144.00
IUUC-Pca-100769 Procavia capensis 31.65 3.00e-38 150.00
IUUC-Ppe-101321 Prunus persica 30.71 1.00e-36 145.00
IUUC-Pva-102759 Pteropus vampyrus 33.66 8.00e-47 179.00
IUUC-Pgr-103535 Puccinia graminis 27.36 6.00e-24 103.00
IUUC-Ptt-103820 Puccinia triticina 27.42 3.00e-23 100.00
IUUC-Pte-104271 Pyrenophora teres 28.16 2.00e-24 104.00
IUUC-Pyt-104500 Pyrenophora triticirepentis 29.15 5.00e-22 97.80
IUUC-Rno-106126 Rattus norvegicus 33.98 2.00e-47 181.00
IUUC-Sha-107146 Sarcophilus harrisii 33.98 4.00e-47 180.00
IUUC-Sja-107865 Schizosaccharomyces japonicus 29.09 2.00e-34 138.00
IUUC-Spo-108324 Schizosaccharomyces pombe 29.62 3.00e-37 147.00
IUUC-Smo-108990 Selaginella moellendorffii 27.99 2.00e-32 131.00
IUUC-Sit-110773 Setaria italica 29.03 3.00e-31 127.00
IUUC-Sly-111619 Solanum lycopersicum 28.57 3.00e-35 140.00
IUUC-Stu-112241 Solanum tuberosum 28.93 2.00e-36 144.00
IUUC-Sbi-114842 Sorghum bicolor 29.29 6.00e-31 126.00
IUUC-Sre-115070 Sporisorium reilianum 29.38 3.00e-19 87.80
IUUC-Ssc-115581 Sus scrofa 33.98 2.00e-47 181.00
IUUC-Tgu-117354 Taeniopygia guttata 33.33 4.00e-44 170.00
IUUC-Tru-117745 Takifugu rubripes 33.98 6.00e-47 179.00
IUUC-Tni-120050 Tetraodon nigroviridis 33.12 9.00e-46 175.00
IUUC-Tca-121279 Theobroma cacao 29.54 2.00e-36 144.00
IUUC-Tre-121952 Trichoderma reesei 24.20 2.00e-25 108.00
IUUC-Tvi-122581 Trichoderma virens 24.91 3.00e-26 110.00
IUUC-Tae-123910 Triticum aestivum 29.03 2.00e-30 125.00
IUUC-Tur-126279 Triticum urartu 27.40 1.00e-28 119.00
IUUC-Tme-127000 Tuber melanosporum 28.81 8.00e-20 89.70
IUUC-Ttr-128405 Tursiops truncatus 34.94 2.00e-41 160.00
IUUC-Uma-129547 Ustilago maydis 25.22 3.00e-17 81.30
IUUC-Vda-129689 Verticillium dahliae 23.21 9.00e-19 86.30
IUUC-Vvi-131345 Vitis vinifera 29.64 3.00e-36 144.00
IUUC-Xtr-132136 Xenopus tropicalis 34.27 1.00e-48 185.00
IUUC-Xma-133767 Xiphophorus maculatus 34.63 9.00e-49 185.00
IUUC-Zma-135816 Zea mays 28.93 3.00e-30 124.00
Created Date 25-Jun-2017

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