iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Dre-027853

Ensembl Protein ID

ENSDARP00000007696.7

UniProt Accession

F1Q728; F1Q728_DANRE

Genbank Protein ID

ENSDARP00000007696

Protein Name

Coronin

Genbank Nucleotide ID

BX324131

Gene Name

coro1b

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSDARG00000008660.8	ENSDART00000021559.8	ENSDARP00000007696.7

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.80e-17	63.0	81	117

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sd.tllvsGsdDgtikvWDlrtgv 34
           gH+++v ++++  +d + ++s+s D+t+k+W + +g 
   Q: 81   GHAAPVLDVQWcpHDdNVIASASEDCTVKIWQIPDGG 117
           8***********9445***************988876 PP

Organism

Danio rerio

Protein Sequence
(Fasta)

MSFRRGVVRQ SKFRHVFAQA WKAEHCLDDV RVSRVTWDGP LCAANPKFIA VVIEAGGGGA 60
FLVLPLAKSG RVDQNTPTVC GHAAPVLDVQ WCPHDDNVIA SASEDCTVKI WQIPDGGLMS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATCGATGCTT TAATTCTAGG CACATTCGCT GAGGAATTTA CCTCCCATCC TCCTTTTTCC 60
TTCAAAGCTA TCGACGCTCT TTTTTCTTTA TTTTAACTTC CTCAAAAGCC CGATTTTGTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR015505--Coronin
IPR015048--DUF1899
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08953--DUF1899
PF00400--WD40

SMART

SM01166--DUF1899
SM00320--WD40

Gene Ontology

GO:0015629--C:actin cytoskeleton
GO:0051015--F:actin filament binding
GO:0030036--P:actin cytoskeleton organization

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ame-011896	Astyanax mexicanus	88.29	0.00e+00	885.00
IUUC-Cne-026773	Cryptococcus neoformans	40.14	1.00e-82	301.00
IUUC-Gmo-038572	Gadus morhua	86.47	0.00e+00	772.00
IUUC-Gac-042055	Gasterosteus aculeatus	78.00	0.00e+00	806.00
IUUC-Ont-072594	Oreochromis niloticus	78.01	0.00e+00	811.00
IUUC-Ola-087251	Oryzias latipes	78.44	0.00e+00	801.00
IUUC-Pfo-097282	Poecilia formosa	79.37	0.00e+00	828.00
IUUC-Tru-118370	Takifugu rubripes	80.64	0.00e+00	818.00
IUUC-Tni-120810	Tetraodon nigroviridis	80.08	0.00e+00	807.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence