iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Itr-048726

Ensembl Protein ID

ENSSTOP00000006116.2

UniProt Accession

I3M8M5; I3M8M5_ICTTR

Genbank Protein ID

ENSSTOP00000006116

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AGTP01047517

Gene Name

TSSC1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSTOG00000006844.2	ENSSTOT00000006843.2	ENSSTOP00000006116.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.00e-18	64.8	127	159

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd..tllvsGsdDgtikvWDlr 31
           H   v++l+f ++   +l+s++dD+++k WD+r
   Q: 127  HGQLVRDLDFnPNkqYYLASCGDDCKVKFWDTR 159
           8999*******555899**************86 PP

Organism

Ictidomys tridecemlineatus

Protein Sequence
(Fasta)

MPKELESGSQ ESPDDSASTA QTLELLCHLD NTAHGNVACV TWEPMGDGKK VISLADNHLL 60
LWDLQESSSQ AVLASSASLE GKGQLKFTSG RWSPHHNCTQ VATASDTTLR GWDTRSMSQI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TGCAGGCACG TGCGCTGACA CCTCAGACTG CAGAAGCAGA TGCCATTCGG TTTTTGGTTG 60
GGACGCAGTC ACTTAAATAT GATAATCAGG TAACTATTTT TGAAATGTAT ACATGTTAAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001118	Aegilops tauschii	38.80	1.00e-30	127.00
IUUC-Aml-002348	Ailuropoda melanoleuca	92.34	8.00e-125	438.00
IUUC-Atr-003028	Amborella trichopoda	36.61	2.00e-38	152.00
IUUC-Apl-004211	Anas platyrhynchos	89.20	3.00e-143	501.00
IUUC-Aca-004893	Anolis carolinensis	88.50	3.00e-146	510.00
IUUC-Aly-006294	Arabidopsis lyrata	36.92	9.00e-40	157.00
IUUC-Ath-007527	Arabidopsis thaliana	36.54	2.00e-39	155.00
IUUC-Ame-010619	Astyanax mexicanus	84.32	2.00e-143	501.00
IUUC-Bta-013035	Bos taurus	86.06	8.00e-139	486.00
IUUC-Bdi-014619	Brachypodium distachyon	36.36	1.00e-41	163.00
IUUC-Bol-016581	Brassica oleracea	35.16	4.00e-37	148.00
IUUC-Bra-017885	Brassica rapa	36.15	5.00e-38	151.00
IUUC-Cel-018344	Caenorhabditis elegans	39.76	8.00e-43	167.00
IUUC-Cja-018975	Callithrix jacchus	93.73	6.00e-145	506.00
IUUC-Cfa-020214	Canis familiaris	90.94	5.00e-145	506.00
IUUC-Cpo-021363	Cavia porcellus	91.29	4.00e-141	494.00
IUUC-Cre-022554	Chlamydomonas reinhardtii	28.32	2.00e-24	105.00
IUUC-Csa-023240	Chlorocebus sabaeus	94.43	3.00e-145	507.00
IUUC-Cho-024713	Choloepus hoffmanni	92.68	8.00e-136	476.00
IUUC-Cin-025678	Ciona intestinalis	47.52	1.00e-74	273.00
IUUC-Csv-026022	Ciona savignyi	48.91	1.00e-72	266.00
IUUC-Dre-027817	Danio rerio	83.28	1.00e-142	498.00
IUUC-Dno-030097	Dasypus novemcinctus	94.43	5.00e-147	513.00
IUUC-Dme-031866	Drosophila melanogaster	41.89	5.00e-52	197.00
IUUC-Ete-032575	Echinops telfairi	74.24	4.00e-89	320.00
IUUC-Eca-034323	Equus caballus	93.06	8.00e-86	309.00
IUUC-Eeu-035217	Erinaceus europaeus	73.43	5.00e-113	400.00
IUUC-Fca-035709	Felis catus	89.57	5.00e-123	433.00
IUUC-Fal-036989	Ficedula albicollis	88.50	2.00e-142	498.00
IUUC-Gmo-038623	Gadus morhua	70.53	2.00e-119	422.00
IUUC-Gga-040157	Gallus gallus	88.85	7.00e-145	506.00
IUUC-Gac-041368	Gasterosteus aculeatus	51.75	2.00e-68	252.00
IUUC-Gma-044196	Glycine max	34.51	6.00e-36	144.00
IUUC-Ggo-044513	Gorilla gorilla	94.43	2.00e-145	508.00
IUUC-Hsa-046844	Homo sapiens	94.43	9.00e-146	509.00
IUUC-Hvu-047435	Hordeum vulgare	37.50	8.00e-42	164.00
IUUC-Lch-049696	Latimeria chalumnae	87.46	5.00e-146	509.00
IUUC-Lpe-050988	Leersia perrieri	38.02	1.00e-31	129.00
IUUC-Loc-052440	Lepisosteus oculatus	87.11	3.00e-146	511.00
IUUC-Laf-054088	Loxodonta africana	93.71	1.00e-145	509.00
IUUC-Mcc-055575	Macaca mulatta	93.73	3.00e-141	494.00
IUUC-Meu-056807	Macropus eugenii	76.21	7.00e-115	407.00
IUUC-Mtr-058599	Medicago truncatula	36.11	4.00e-38	151.00
IUUC-Mga-059336	Meleagris gallopavo	88.85	1.00e-138	486.00
IUUC-Mmr-061706	Microcebus murinus	94.08	7.00e-149	519.00
IUUC-Mdo-062736	Monodelphis domestica	89.20	3.00e-138	484.00
IUUC-Mmu-064265	Mus musculus	94.06	5.00e-163	566.00
IUUC-Mac-065342	Musa acuminata	35.82	2.00e-39	156.00
IUUC-Mpu-066514	Mustela putorius furo	89.20	7.00e-142	496.00
IUUC-Mlu-067072	Myotis lucifugus	89.34	3.00e-105	373.00
IUUC-Nle-069307	Nomascus leucogenys	89.90	3.00e-134	471.00
IUUC-Opr-070283	Ochotona princeps	74.22	5.00e-117	414.00
IUUC-Ont-072532	Oreochromis niloticus	79.79	7.00e-132	462.00
IUUC-Oan-073222	Ornithorhynchus anatinus	90.59	9.00e-152	529.00
IUUC-Oba-075849	Oryza barthii	38.80	9.00e-32	130.00
IUUC-Obr-076488	Oryza brachyantha	35.19	7.00e-34	137.00
IUUC-Ogl-077928	Oryza glaberrima	38.80	9.00e-32	130.00
IUUC-Ogu-077997	Oryza glumaepatula	34.47	8.00e-32	130.00
IUUC-Oin-079848	Oryza indica	38.80	2.00e-31	129.00
IUUC-Oni-082492	Oryza nivara	38.80	9.00e-32	130.00
IUUC-Oru-085119	Oryza rufipogon	38.80	9.00e-32	130.00
IUUC-Osa-086152	Oryza sativa	38.80	8.00e-32	130.00
IUUC-Ola-086694	Oryzias latipes	77.00	1.00e-134	472.00
IUUC-Olu-087749	Ostreococcus lucimarinus	33.82	1.00e-24	105.00
IUUC-Oga-088180	Otolemur garnettii	93.73	5.00e-138	483.00
IUUC-Oar-089621	Ovis aries	67.81	4.00e-82	297.00
IUUC-Ptr-091053	Pan troglodytes	94.43	5.00e-145	506.00
IUUC-Pan-091918	Papio anubis	93.73	6.00e-144	503.00
IUUC-Psi-093545	Pelodiscus sinensis	89.51	1.00e-143	502.00
IUUC-Pma-094439	Petromyzon marinus	73.38	6.00e-116	410.00
IUUC-Pfo-096127	Poecilia formosa	81.88	2.00e-139	488.00
IUUC-Pab-097916	Pongo abelii	94.43	1.00e-145	509.00
IUUC-Pop-098864	Populus trichocarpa	34.75	7.00e-37	147.00
IUUC-Pca-100797	Procavia capensis	79.26	2.00e-118	418.00
IUUC-Ppe-101796	Prunus persica	35.29	6.00e-39	154.00
IUUC-Pva-103228	Pteropus vampyrus	87.80	2.00e-141	495.00
IUUC-Rno-104877	Rattus norvegicus	94.06	1.00e-152	531.00
IUUC-Sha-106940	Sarcophilus harrisii	90.62	4.00e-149	520.00
IUUC-Smo-109534	Selaginella moellendorffii	32.62	8.00e-41	160.00
IUUC-Sit-109958	Setaria italica	37.08	2.00e-41	162.00
IUUC-Sly-111871	Solanum lycopersicum	33.72	4.00e-36	144.00
IUUC-Stu-112128	Solanum tuberosum	33.33	3.00e-33	135.00
IUUC-Sar-113084	Sorex araneus	68.22	1.00e-66	246.00
IUUC-Sbi-114122	Sorghum bicolor	37.45	9.00e-41	160.00
IUUC-Ssc-115385	Sus scrofa	83.62	3.00e-135	474.00
IUUC-Tgu-117090	Taeniopygia guttata	88.85	2.00e-148	518.00
IUUC-Tru-118548	Takifugu rubripes	79.44	2.00e-138	484.00
IUUC-Tsy-119435	Tarsius syrichta	94.43	3.00e-140	491.00
IUUC-Tni-120311	Tetraodon nigroviridis	67.47	3.00e-108	384.00
IUUC-Tca-121141	Theobroma cacao	35.55	2.00e-35	143.00
IUUC-Tae-122717	Triticum aestivum	37.50	1.00e-41	163.00
IUUC-Tbe-127623	Tupaia belangeri	72.58	5.00e-86	310.00
IUUC-Ttr-128706	Tursiops truncatus	85.55	4.00e-79	288.00
IUUC-Vvi-130871	Vitis vinifera	35.38	7.00e-34	137.00
IUUC-Xtr-131950	Xenopus tropicalis	84.67	6.00e-143	499.00
IUUC-Xma-133364	Xiphophorus maculatus	81.53	4.00e-138	484.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence