iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-057928

Ensembl Protein ID

AET04687

UniProt Accession

G7LD48; G7LD48_MEDTR

Genbank Protein ID

AET04687.1

Protein Name

RING-H2 zinc finger protein

Genbank Nucleotide ID

CM001224

Gene Name

MTR_8g093010

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_8g093010	AET04687	AET04687

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	8.20e-08	34.1	134	176

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCl++f   ++ +++lp C+H fh  C+ kw       + + +CP Cr
   Q: 134  CIICLSEFtkgEK-VRILPkCNHGFHVRCIDKW------LKEHPSCPKCR 176
           ********66444.*******************......**********8 PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MYAASTSFTS QLVHELLVES HTRRLLFQDP IEHQSLTNSH VLTNNNHNST DSYFGAREFD 60
SNVIMILAVL LCALICSLAL NSIIRCGLRF SNVALHNDPS LSSSNKGIKK KALKTFPTVS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCCCAACAAA AAACAATGTA TGCTGCTTCT ACTTCCTTTA CTTCACAACT CGTCCATGAG 60
CTTCTTGTGG AATCTCACAC AAGAAGGTTA CTCTTTCAAG ACCCAATTGA ACATCAATCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

mtr:MTR_8g093010

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ame-011730	Astyanax mexicanus	37.11	4.00e-14	72.80
IUUC-Dno-029617	Dasypus novemcinctus	33.65	3.00e-13	69.70
IUUC-Gac-042220	Gasterosteus aculeatus	33.04	2.00e-14	73.90
IUUC-Ont-072086	Oreochromis niloticus	36.56	1.00e-14	74.70
IUUC-Ola-087452	Oryzias latipes	36.56	1.00e-14	74.30
IUUC-Pfo-096637	Poecilia formosa	37.63	5.00e-15	75.90
IUUC-Tru-118302	Takifugu rubripes	31.09	7.00e-15	75.10
IUUC-Tni-119675	Tetraodon nigroviridis	33.65	3.00e-14	72.80

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence