iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Stu-112394

Ensembl Protein ID

PGSC0003DMT400046078

UniProt Accession

M1BIM3; M1BIM3_SOLTU

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PGSC0003DMG400017881	PGSC0003DMT400046078	PGSC0003DMT400046078

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.00e-07	32.3	256	288

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 5    svtclaf.sd.tllvsGsdDgt.ikvWDlrtgv 34
            +t+l++ ++ ++l+s+s   +   +WD+ +gv
   Q: 256  QITALSWsPNgKYLASASFESSsFIIWDVAQGV 288
           49******777*******66555******9987 PP

Organism

Solanum tuberosum

Protein Sequence
(Fasta)

MVFVLKALMI FFSLPFLKAC LEKAKSWQES TQNRNHKPCL SLCCLKNMPS FPQPGEVTIC 60
EINRDLITAD ELSDDAAKET YGKVLGIIFS PVPFQSENLL SALSSEQGAD QRKSGLLWAA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TATAAGTCAT AAGCCAAAAG CCAATCCAAA CAGGCCCTAA CTCTAATCTC TGGGGTTTCT 60
ATGGTCTGCC TTTTGAGTTA GCATGGTGTT TGTGCTTAAA GCTCTGATGA TTTTTTTCAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0732--Signal
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aca-004244	Anolis carolinensis	29.09	6.00e-31	127.00
IUUC-Ame-011057	Astyanax mexicanus	30.79	4.00e-40	158.00
IUUC-Bdi-014681	Brachypodium distachyon	61.90	6.00e-163	565.00
IUUC-Gmo-038799	Gadus morhua	28.09	1.00e-40	159.00
IUUC-Gga-040339	Gallus gallus	29.34	2.00e-36	145.00
IUUC-Gac-042090	Gasterosteus aculeatus	29.40	6.00e-36	144.00
IUUC-Mga-059251	Meleagris gallopavo	27.71	4.00e-33	134.00
IUUC-Mlu-068047	Myotis lucifugus	29.01	3.00e-30	125.00
IUUC-Ont-072319	Oreochromis niloticus	28.46	2.00e-38	152.00
IUUC-Obr-076080	Oryza brachyantha	61.45	8.00e-162	561.00
IUUC-Ogl-077614	Oryza glaberrima	60.27	3.00e-152	530.00
IUUC-Oin-079329	Oryza indica	57.14	6.00e-129	452.00
IUUC-Osa-085732	Oryza sativa	60.05	5.00e-152	529.00
IUUC-Ola-086764	Oryzias latipes	30.90	9.00e-37	146.00
IUUC-Pfo-097211	Poecilia formosa	29.55	1.00e-39	155.00
IUUC-Tgu-117444	Taeniopygia guttata	34.15	2.00e-16	77.40
IUUC-Tru-117902	Takifugu rubripes	26.90	1.00e-33	136.00
IUUC-Tni-120875	Tetraodon nigroviridis	27.04	5.00e-36	144.00
IUUC-Tca-121629	Theobroma cacao	71.75	0.00e+00	645.00
IUUC-Tae-124663	Triticum aestivum	60.63	3.00e-154	536.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence