iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pop-099334

Ensembl Protein ID

POPTR_0001s12260.1

UniProt Accession

B9GN07; B9GN07_POPTR

Genbank Protein ID

EEE84190.2; ERP65405.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000337; CM000337

Gene Name

POPTR_0001s12260g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0001s12260	POPTR_0001s12260.1	POPTR_0001s12260.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.80e-06	28.2	130	168

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf....sdtllvsGsdDgtikvWDlrtgvll 36
           H +s t l++    s++++ +G+ D+++++W++++g+ll
   Q: 130  HVNSHTRLQLgvdqSERFVMAGGEDCSLRLWSIKSGKLL 168
           666666677777644488999************999876 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MTSWVCRSKS DVLSQQLDPS GNVVLCGLRN GAILTVDVRE KQERVSDRFI RHRIPYSSLG 60
RQGPSSSKQW FEVKGNIYPS RTILMPSSVC SLVSLQSYDQ YFLASSMDGL IKLYDQRMTK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGCTTCTCTA CATATGTCTT CAAATATATC TTGTATAAAA ATGTGTGGAA AGCACTCTCC 60
CATCCAGCGG GCATTGTATC CTATTTCAAT TATATTTTTT ACTTAATTAG TTTGTCCATT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

KEGG

pop:POPTR_0001s12260g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001176	Aegilops tauschii	49.28	5.00e-50	189.00
IUUC-Aml-001929	Ailuropoda melanoleuca	31.68	8.00e-14	71.20
IUUC-Atr-002556	Amborella trichopoda	50.64	9.00e-62	230.00
IUUC-Apl-003177	Anas platyrhynchos	29.81	8.00e-14	71.20
IUUC-Aca-004610	Anolis carolinensis	27.95	2.00e-13	69.70
IUUC-Aly-005883	Arabidopsis lyrata	48.88	2.00e-53	202.00
IUUC-Ath-006668	Arabidopsis thaliana	57.75	1.00e-56	214.00
IUUC-Ame-010690	Astyanax mexicanus	32.08	6.00e-14	71.60
IUUC-Bta-012668	Bos taurus	31.06	2.00e-15	76.60
IUUC-Bdi-014848	Brachypodium distachyon	45.13	6.00e-45	174.00
IUUC-Bol-016035	Brassica oleracea	51.35	8.00e-57	214.00
IUUC-Bra-016687	Brassica rapa	52.04	1.00e-56	213.00
IUUC-Cja-019560	Callithrix jacchus	36.84	1.00e-11	62.00
IUUC-Cfa-020441	Canis familiaris	31.68	8.00e-14	71.20
IUUC-Cpo-021299	Cavia porcellus	32.10	1.00e-13	70.90
IUUC-Csa-023185	Chlorocebus sabaeus	33.54	4.00e-15	75.50
IUUC-Cho-024353	Choloepus hoffmanni	33.74	3.00e-16	79.30
IUUC-Dno-029890	Dasypus novemcinctus	32.92	2.00e-16	80.10
IUUC-Eca-033466	Equus caballus	31.68	8.00e-15	74.70
IUUC-Eeu-034995	Erinaceus europaeus	31.68	2.00e-14	72.80
IUUC-Fca-036199	Felis catus	31.68	8.00e-14	71.20
IUUC-Fal-036717	Ficedula albicollis	31.06	4.00e-15	75.90
IUUC-Gmo-039201	Gadus morhua	31.45	3.00e-13	69.70
IUUC-Gga-040398	Gallus gallus	30.43	1.00e-14	73.60
IUUC-Gac-042391	Gasterosteus aculeatus	33.96	1.00e-16	80.90
IUUC-Gma-043880	Glycine max	61.43	3.00e-72	265.00
IUUC-Ggo-045348	Gorilla gorilla	34.16	9.00e-16	77.80
IUUC-Hsa-046746	Homo sapiens	34.16	1.00e-15	77.40
IUUC-Hvu-047825	Hordeum vulgare	47.79	1.00e-53	203.00
IUUC-Itr-048472	Ictidomys tridecemlineatus	31.68	4.00e-14	72.40
IUUC-Lch-050272	Latimeria chalumnae	29.81	5.00e-14	72.00
IUUC-Lpe-051618	Leersia perrieri	44.69	2.00e-46	179.00
IUUC-Loc-051772	Lepisosteus oculatus	33.96	3.00e-18	85.90
IUUC-Laf-054577	Loxodonta africana	31.06	4.00e-13	68.90
IUUC-Mcc-055284	Macaca mulatta	33.54	5.00e-15	75.10
IUUC-Mtr-058472	Medicago truncatula	60.09	2.00e-73	269.00
IUUC-Mga-059238	Meleagris gallopavo	30.43	1.00e-14	74.30
IUUC-Mmr-061642	Microcebus murinus	32.30	3.00e-13	68.90
IUUC-Mdo-062030	Monodelphis domestica	29.81	3.00e-14	72.40
IUUC-Mmu-063420	Mus musculus	31.48	2.00e-15	76.60
IUUC-Mac-065231	Musa acuminata	53.78	2.00e-61	229.00
IUUC-Mpu-065692	Mustela putorius furo	31.68	9.00e-14	70.90
IUUC-Mlu-067428	Myotis lucifugus	31.68	4.00e-15	75.90
IUUC-Nle-070145	Nomascus leucogenys	33.54	1.00e-15	77.40
IUUC-Opr-071081	Ochotona princeps	31.68	2.00e-13	69.70
IUUC-Ont-071302	Oreochromis niloticus	34.59	4.00e-16	79.00
IUUC-Oan-073494	Ornithorhynchus anatinus	29.71	2.00e-08	53.50
IUUC-Ocu-073925	Oryctolagus cuniculus	32.30	3.00e-11	62.80
IUUC-Oba-075797	Oryza barthii	46.46	2.00e-46	179.00
IUUC-Obr-076014	Oryza brachyantha	45.58	5.00e-47	181.00
IUUC-Ogl-077201	Oryza glaberrima	46.46	3.00e-46	179.00
IUUC-Ogu-078056	Oryza glumaepatula	46.46	2.00e-46	179.00
IUUC-Oin-080062	Oryza indica	46.46	2.00e-46	179.00
IUUC-Olo-080869	Oryza longistaminata	46.46	4.00e-46	179.00
IUUC-Ome-081820	Oryza meridionalis	46.02	9.00e-47	180.00
IUUC-Oni-082497	Oryza nivara	46.46	3.00e-46	178.00
IUUC-Opu-083780	Oryza punctata	42.38	5.00e-41	162.00
IUUC-Oru-085091	Oryza rufipogon	46.46	2.00e-46	179.00
IUUC-Osa-085725	Oryza sativa	46.46	2.00e-46	179.00
IUUC-Ola-087033	Oryzias latipes	32.08	2.00e-15	76.30
IUUC-Oga-088861	Otolemur garnettii	33.54	2.00e-15	76.60
IUUC-Oar-090048	Ovis aries	31.06	2.00e-14	73.60
IUUC-Ptr-091658	Pan troglodytes	34.16	9.00e-16	77.80
IUUC-Pan-092570	Papio anubis	30.43	1.00e-13	70.50
IUUC-Psi-093421	Pelodiscus sinensis	31.06	7.00e-15	74.70
IUUC-Pma-094216	Petromyzon marinus	30.86	3.00e-12	65.90
IUUC-Ppa-095186	Physcomitrella patens	39.34	8.00e-36	144.00
IUUC-Pfo-096178	Poecilia formosa	31.45	2.00e-13	70.10
IUUC-Pab-098037	Pongo abelii	34.78	5.00e-12	65.10
IUUC-Pca-100845	Procavia capensis	31.68	7.00e-14	71.60
IUUC-Pva-103203	Pteropus vampyrus	31.68	1.00e-14	73.90
IUUC-Rno-105675	Rattus norvegicus	31.68	9.00e-16	77.80
IUUC-Sha-107389	Sarcophilus harrisii	28.57	4.00e-12	65.90
IUUC-Sit-110421	Setaria italica	47.14	3.00e-53	201.00
IUUC-Sly-110888	Solanum lycopersicum	53.33	4.00e-57	215.00
IUUC-Sbi-114182	Sorghum bicolor	46.70	3.00e-44	170.00
IUUC-Ssc-116005	Sus scrofa	31.06	1.00e-14	73.60
IUUC-Tgu-117023	Taeniopygia guttata	29.19	3.00e-12	65.90
IUUC-Tru-118221	Takifugu rubripes	34.78	6.00e-16	78.60
IUUC-Tsy-118784	Tarsius syrichta	33.54	7.00e-14	71.20
IUUC-Tni-120072	Tetraodon nigroviridis	33.33	3.00e-15	75.90
IUUC-Tca-121267	Theobroma cacao	70.40	6.00e-86	310.00
IUUC-Tae-124900	Triticum aestivum	48.23	9.00e-55	206.00
IUUC-Tur-126655	Triticum urartu	48.67	1.00e-54	206.00
IUUC-Tbe-127243	Tupaia belangeri	38.95	1.00e-09	57.40
IUUC-Ttr-129237	Tursiops truncatus	32.30	4.00e-15	75.50
IUUC-Vvi-131184	Vitis vinifera	60.17	2.00e-77	282.00
IUUC-Xtr-132006	Xenopus tropicalis	41.46	3.00e-11	62.80

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence