iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ola-087341

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

BAAF04046589

Gene Name

wdr47a (1 of many); LOC101175145

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSORLG00000006856.1	ENSORLT00000008618.1	ENSORLP00000008617.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.10e-28	96.9	724	761
UBD/Beta-Prp	9.50e-42	143.5	571	887

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtcla.fsd.tllvsGsdDgtikvWDlrtgvllk 37
           gHt+ + +l  + + ++++sGs D+t++ WDlr   +++
   Q: 724  GHTGHILSLYtW-GgWMIASGSQDKTVRFWDLRVPSCVR 761
           8*******9669.44*****************9888875 PP

UBD/Beta-Prp

   S: 4    tlkghhksvitcvkfspdksllatgsrdgtikvwdvttgkl.............lrslsgheaevtavkfspdgkilvtgseDrtikvw 79
           +++ ++++ +++v+f+p++ l a+gs ++t++v  + +  +             +r+ + h++ +++v++s+ g++l+tgs+D+++kv 
   Q: 571  VSQLEDTQAVRAVAFHPSGALYAVGSNSKTLRVCAYPETLTtsgsgavkqpavrFRRNKHHKGSIYCVTWSHCGQLLATGSNDKFVKVL 659
           567778889999***********************9997779**********************************************9 PP
   S: 80   dls.....tgkcvhtlkghedsvlslsfsp...sg.dklvsGs.hdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslD 158
           +++     +  +   ++ h+ ++++l+f++   sg + l+s++  d  i   d   gq l+  lsgh+g + ++ + + g +++sGs D
   Q: 660  PFNadscnATGPDLEFSMHDGTIRDLAFMEgpeSGgSILISAGaGDCNIYTTDCLRGQGLH-ALSGHTGHILSLYTWG-GWMIASGSQD 746
           7773344422222345567777777777777765524444433023333334555666666.7777777777766666.6777777777 PP
   S: 159  rtvrlWdlktgkllrtl....tgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssD 243
           +tvr+Wdl+  +++r       g   ++v s+++d++g+ l++g +d+t  l+d++ g++v+t++ h+  v+svrfsp  ++l++gs D
   Q: 747  KTVRFWDLRVPSCVRVVgttlHG-SGSAVASVAVDPSGRLLATGQEDSTCMLYDIRGGRIVQTCRPHSGDVRSVRFSPGAHHLLTGSYD 834
           77777777777777766655333.66777777777777777777777777777777777777777777777777777777777777777 PP
   S: 244  gsiriWdlrsgdllktlqlhn.....ssvisvavlsfgdnvlvlgsedskvniwk 293
           + i i dl+ gdl+k l ++      ++vi +   ++ ++ +++ s+d +v +w+
   Q: 835  NKIIISDLQ-GDLTKPLPQTVagehsDKVIQCRW-HPHNQTFLSSSADRTVVLWA 887
           777777543.222222222222221355555554.77777777777777777775 PP

Organism

Oryzias latipes

Protein Sequence
(Fasta)

MTAEEAINIK EAEVIKLILD FLNSRKLHIS MLALEKESGV INGLYSDDML FLSRQLILDG 60
QWEEVMQFIQ PLEGMEKFDK KRFRYIVLKQ KFLEALCVNN AMTAVEDPQN LELTMQQAVR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGACTGCAG AAGAAGCCAT TAACATCAAG GAGGCGGAGG TGATCAAGCT GATTCTCGAC 60
TTCCTCAACT CCAGAAAGCT GCACATCAGC ATGCTGGCCC TGGAAAAGGA GAGCGGGGTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR006595--CTLH_C
IPR006594--LisH
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50897--CTLH
PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF00400--WD40

SMART

SM00668--CTLH
SM00667--LisH
SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ame-010725	Astyanax mexicanus	70.12	0.00e+00	1086.00
IUUC-Cel-018667	Caenorhabditis elegans	49.70	1.00e-95	344.00
IUUC-Dme-032040	Drosophila melanogaster	52.74	1.00e-101	362.00
IUUC-Gac-041429	Gasterosteus aculeatus	80.02	0.00e+00	1345.00
IUUC-Ont-072376	Oreochromis niloticus	83.56	0.00e+00	1397.00
IUUC-Pfo-096439	Poecilia formosa	83.80	0.00e+00	1401.00
IUUC-Tru-117591	Takifugu rubripes	79.00	0.00e+00	1309.00
IUUC-Tni-120018	Tetraodon nigroviridis	76.23	0.00e+00	1350.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence