iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-113839

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000769

Gene Name

SORBI_010G274600

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb10g030850	Sb10g030850.1	Sb10g030850.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.20e-06	29.5	255	287

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrt 32
           H ++vt++af  + +l+++++ D +ik+WDlr+
   Q: 255  HHGPVTAVAFdRGgNLMATAGVDRKIKIWDLRK 287
           8899******96679***************986 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MEVEVAKYSR GQGADLKALR DKKLKGQLTV KEKLYGQSAK AAAKAEKWLM PNDGGILEPD 60
HLEKTYRFSQ KDILTEVDLL SSRKPFDMIL PVLGPYHIGY TSNGRYMLVG GRKGHLAMMD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CGTGACCGAC GACTGGGCCG ACCGCCGCCG CCGACGACGA GCACCACCAG TTACGCGCTT 60
CCCTTCCTTC TGGGAGAAGC CGTGCGCCCA AACCTTAACG TAGCAGGACG CTCAGCACGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR012952--BING4_C_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08149--BING4CT
PF00400--WD40

SMART

SM01033--BING4CT
SM00320--WD40

Gene Ontology

GO:0030686--C:90S preribosome
GO:0005730--C:nucleolus
GO:0032040--C:small-subunit processome
GO:0000462--P:maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)

KEGG

sbi:SORBI_10g030850

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002528	Amborella trichopoda	66.03	4.00e-169	586.00
IUUC-Ang-009764	Aspergillus niger	39.92	2.00e-96	345.00
IUUC-Ame-011572	Astyanax mexicanus	43.91	1.00e-90	326.00
IUUC-Cel-018465	Caenorhabditis elegans	45.48	6.00e-94	337.00
IUUC-Cgl-026438	Colletotrichum gloeosporioides	40.39	9.00e-101	359.00
IUUC-Dre-028533	Danio rerio	44.31	5.00e-87	314.00
IUUC-Dse-031280	Dothistroma septosporum	39.19	4.00e-93	334.00
IUUC-Fox-037980	Fusarium oxysporum	40.47	1.00e-97	349.00
IUUC-Fso-038154	Fusarium solani	39.73	7.00e-99	353.00
IUUC-Gmo-039548	Gadus morhua	45.99	3.00e-90	324.00
IUUC-Ggr-039976	Gaeumannomyces graminis	39.57	2.00e-97	348.00
IUUC-Kpa-049329	Komagataella pastoris	45.70	3.00e-94	338.00
IUUC-Mor-057146	Magnaporthe oryzae	39.72	2.00e-94	338.00
IUUC-Mpo-057512	Magnaporthe poae	38.01	2.00e-96	345.00
IUUC-Ola-086667	Oryzias latipes	45.28	2.00e-95	342.00
IUUC-Olu-087881	Ostreococcus lucimarinus	45.13	2.00e-111	395.00
IUUC-Pma-094742	Petromyzon marinus	41.54	7.00e-86	310.00
IUUC-Ppa-095230	Physcomitrella patens	50.20	1.00e-137	482.00
IUUC-Pte-104146	Pyrenophora teres	42.79	2.00e-92	332.00
IUUC-Pyt-104559	Pyrenophora triticirepentis	41.28	2.00e-91	329.00
IUUC-Sce-106227	Saccharomyces cerevisiae	41.57	4.00e-96	344.00
IUUC-Sja-107925	Schizosaccharomyces japonicus	47.18	1.00e-100	359.00
IUUC-Spo-108359	Schizosaccharomyces pombe	45.65	2.00e-99	355.00
IUUC-Sre-115150	Sporisorium reilianum	42.32	7.00e-89	320.00
IUUC-Tre-122114	Trichoderma reesei	41.96	3.00e-101	361.00
IUUC-Tvi-122437	Trichoderma virens	41.45	2.00e-99	355.00
IUUC-Tme-127208	Tuber melanosporum	45.76	1.00e-104	373.00
IUUC-Uma-129320	Ustilago maydis	43.03	2.00e-89	322.00
IUUC-Vda-129926	Verticillium dahliae	39.46	2.00e-96	345.00
IUUC-Yli-134674	Yarrowia lipolytica	41.38	2.00e-91	329.00
IUUC-Zma-135903	Zea mays	95.34	0.00e+00	815.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence