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Basic Information Integrated Annotations
Tag Content
iUUCD ID IUUC-Cel-018313
UUCD1 version UUC-CaE-00035
Ensembl Protein ID F33G12.4.1
UniProt Accession Q19988; Q19988_CAEEL
Genbank Protein ID CCD65793.1
Protein Name Leucine-Rich Repeat protein
Genbank Nucleotide ID BX284602
Gene Name lrr-1; CELE_F33G12.4; F33G12.4
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
WBGene00018016 F33G12.4.1 F33G12.4.1
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
microRNARAID2
Protein-protein Interaction
IIDPINA
Protein Expression/Proteomics
GPMDB
Status Reviewed
Details
Family Domain References (PMIDs)
E3 adaptor/Cullin RING/ECS/SOCS_VHL_BC-box SOCS 20978077; 21074711
Organism Caenorhabditis elegans
Protein Sequence
(Fasta)
MRLPCEVVFA RYKANAGVNP KPTKSQKGFV ILQKLRQTPP QYQITVAVAG DKTGNKFELN 60
KPPIILDKFI AQGKTTITFQ TTPAVMVCIS KANPEALAQL IEAIRKIVKG ENVDIEKVKV 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Cel-018313|E3,SOCS|Caenorhabditis elegans
Please wait for a moment...
Nucleotide Sequence
(Fasta)
ATTTCAATAA AAAATGCGAT TACCATGTGA AGTGGTTTTT GCACGTTATA AAGCAAATGC 60
CGGAGTTAAT CCAAAACCCA CGAAATCGCA AAAAGGATTT GTTATTCTGC AAAAACTTCG 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Cel-018313|E3,SOCS|Caenorhabditis elegans
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome
Interpro

IPR032675--L_dom-like
Gene Ontology

GO:0031462--C:Cul2-RING ubiquitin ligase complex
GO:0005634--C:nucleus
GO:0033314--P:mitotic DNA replication checkpoint
KEGG cel:CELE_F33G12.4
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Aml-001780 Ailuropoda melanoleuca 26.67 7.00e-14 70.50
IUUC-Atr-002772 Amborella trichopoda 33.90 5.00e-06 43.50
IUUC-Apl-004029 Anas platyrhynchos 35.00 7.00e-09 54.30
IUUC-Aca-004845 Anolis carolinensis 26.50 2.00e-06 45.80
IUUC-Aly-005571 Arabidopsis lyrata 26.14 6.00e-08 52.00
IUUC-Ath-006853 Arabidopsis thaliana 27.01 1.00e-10 59.30
IUUC-Ang-009506 Aspergillus niger 39.13 1.10e+00 26.60
IUUC-Ame-011571 Astyanax mexicanus 25.88 2.00e-13 68.90
IUUC-Bta-013510 Bos taurus 27.61 4.00e-13 68.20
IUUC-Bci-013665 Botrytis cinerea 24.26 1.60e-02 33.10
IUUC-Bol-016339 Brassica oleracea 26.26 4.00e-08 50.80
IUUC-Bra-016795 Brassica rapa 34.91 2.00e-08 52.00
IUUC-Cja-019616 Callithrix jacchus 26.82 6.00e-14 70.50
IUUC-Cfa-020085 Canis familiaris 25.93 2.00e-13 68.90
IUUC-Cpo-022006 Cavia porcellus 26.71 4.00e-11 61.20
IUUC-Cre-022825 Chlamydomonas reinhardtii 27.27 8.00e-03 33.50
IUUC-Csa-023376 Chlorocebus sabaeus 27.53 8.00e-16 76.60
IUUC-Cho-024851 Choloepus hoffmanni 27.27 2.00e-08 52.40
IUUC-Csv-025951 Ciona savignyi 25.55 2.00e-15 75.90
IUUC-Dre-027424 Danio rerio 35.00 4.00e-09 55.50
IUUC-Dno-029840 Dasypus novemcinctus 25.46 5.00e-12 64.30
IUUC-Dor-030722 Dipodomys ordii 26.11 9.00e-14 70.10
IUUC-Dme-031624 Drosophila melanogaster 22.12 4.00e-06 44.70
IUUC-Ete-032265 Echinops telfairi 27.85 2.00e-16 78.60
IUUC-Eca-033505 Equus caballus 31.82 4.00e-10 58.90
IUUC-Eeu-034807 Erinaceus europaeus 27.12 4.00e-13 67.80
IUUC-Fca-035883 Felis catus 27.04 6.00e-13 67.40
IUUC-Fal-037470 Ficedula albicollis 30.99 6.00e-04 37.40
IUUC-Gmo-039145 Gadus morhua 24.07 1.00e-12 66.20
IUUC-Gga-040580 Gallus gallus 26.57 3.00e-09 54.70
IUUC-Gac-041408 Gasterosteus aculeatus 24.77 1.00e-13 69.70
IUUC-Gma-043846 Glycine max 30.67 4.00e-05 41.20
IUUC-Ggo-044999 Gorilla gorilla 27.22 3.00e-15 75.10
IUUC-Hsa-046896 Homo sapiens 26.90 4.00e-14 71.20
IUUC-Hvu-047769 Hordeum vulgare 29.10 8.00e-06 43.50
IUUC-Itr-048389 Ictidomys tridecemlineatus 26.52 2.00e-14 72.00
IUUC-Lch-049921 Latimeria chalumnae 27.67 1.00e-08 53.10
IUUC-Loc-052946 Lepisosteus oculatus 25.71 1.00e-09 56.20
IUUC-Laf-053665 Loxodonta africana 25.38 1.00e-13 69.70
IUUC-Mcc-055451 Macaca mulatta 27.22 1.00e-15 75.90
IUUC-Meu-056407 Macropus eugenii 34.25 1.00e-07 50.40
IUUC-Mtr-057683 Medicago truncatula 27.61 1.00e-07 49.70
IUUC-Mga-059898 Meleagris gallopavo 32.50 2.00e-08 53.10
IUUC-Mvi-060250 Microbotryum violaceum 38.46 1.80e+00 27.30
IUUC-Mmr-061640 Microcebus murinus 28.44 2.00e-17 82.00
IUUC-Mdo-062013 Monodelphis domestica 26.56 1.00e-07 49.70
IUUC-Mmu-064208 Mus musculus 28.31 3.00e-12 65.10
IUUC-Mac-064501 Musa acuminata 31.51 1.00e-04 39.30
IUUC-Mpu-066695 Mustela putorius furo 25.76 4.00e-12 64.30
IUUC-Mlu-067598 Myotis lucifugus 27.63 8.00e-14 70.10
IUUC-Nle-069282 Nomascus leucogenys 26.75 5.00e-12 64.30
IUUC-Opr-070622 Ochotona princeps 24.15 2.00e-11 62.00
IUUC-Ont-072349 Oreochromis niloticus 25.16 6.00e-11 60.80
IUUC-Oan-073270 Ornithorhynchus anatinus 24.90 2.00e-04 38.90
IUUC-Ocu-074328 Oryctolagus cuniculus 25.47 1.00e-13 69.70
IUUC-Obr-076454 Oryza brachyantha 25.13 3.00e-09 54.70
IUUC-Ogl-077480 Oryza glaberrima 24.14 5.00e-09 54.30
IUUC-Oin-079319 Oryza indica 29.41 3.00e-08 52.00
IUUC-Olo-080347 Oryza longistaminata 36.84 3.00e-07 49.30
IUUC-Ome-081910 Oryza meridionalis 27.39 5.00e-08 51.60
IUUC-Ola-087391 Oryzias latipes 25.16 4.00e-13 67.80
IUUC-Oga-088088 Otolemur garnettii 25.79 8.00e-13 67.00
IUUC-Oar-089741 Ovis aries 27.61 7.00e-13 67.00
IUUC-Ptr-091019 Pan troglodytes 26.90 1.00e-14 73.20
IUUC-Pan-092495 Papio anubis 27.22 1.00e-15 76.30
IUUC-Psi-093778 Pelodiscus sinensis 25.22 1.00e-07 50.40
IUUC-Pma-094443 Petromyzon marinus 25.27 7.00e-08 50.40
IUUC-Ppa-095427 Physcomitrella patens 21.33 3.00e-06 44.70
IUUC-Pfo-096494 Poecilia formosa 25.70 3.00e-13 68.60
IUUC-Pab-097847 Pongo abelii 27.53 4.00e-15 74.70
IUUC-Pop-099197 Populus trichocarpa 29.20 3.00e-07 48.10
IUUC-Pca-100526 Procavia capensis 27.82 2.00e-08 52.80
IUUC-Ppe-101851 Prunus persica 31.71 7.00e-05 40.00
IUUC-Pva-103223 Pteropus vampyrus 26.01 2.00e-12 65.50
IUUC-Pgr-103622 Puccinia graminis 28.12 2.00e-06 47.80
IUUC-Pyt-104751 Pyrenophora triticirepentis 26.79 5.30e-02 32.30
IUUC-Rno-105407 Rattus norvegicus 26.77 1.00e-09 56.20
IUUC-Sha-107485 Sarcophilus harrisii 31.82 5.00e-09 55.10
IUUC-Spo-108106 Schizosaccharomyces pombe 27.07 2.60e-02 33.10
IUUC-Sit-110214 Setaria italica 39.71 2.00e-07 48.90
IUUC-Sly-111052 Solanum lycopersicum 32.00 9.00e-08 50.10
IUUC-Stu-112067 Solanum tuberosum 23.16 1.00e-07 49.30
IUUC-Sar-113321 Sorex araneus 30.53 2.00e-09 55.80
IUUC-Sbi-114187 Sorghum bicolor 37.33 4.00e-07 47.80
IUUC-Ssc-116105 Sus scrofa 30.91 3.00e-09 55.80
IUUC-Tgu-116857 Taeniopygia guttata 30.11 5.00e-08 51.20
IUUC-Tru-118303 Takifugu rubripes 25.32 4.00e-08 51.20
IUUC-Tsy-119382 Tarsius syrichta 33.33 2.00e-05 42.70
IUUC-Tni-120292 Tetraodon nigroviridis 25.47 4.00e-14 71.20
IUUC-Tca-121678 Theobroma cacao 27.66 1.00e-07 49.70
IUUC-Tae-124968 Triticum aestivum 29.10 3.00e-06 44.70
IUUC-Tbe-128087 Tupaia belangeri 27.40 2.00e-14 72.00
IUUC-Ttr-128489 Tursiops truncatus 25.24 1.00e-14 72.80
IUUC-Vda-129866 Verticillium dahliae 29.03 1.20e-01 31.20
IUUC-Vpa-130740 Vicugna pacos 30.00 5.00e-08 51.60
IUUC-Vvi-131120 Vitis vinifera 30.00 1.00e-05 42.70
IUUC-Xtr-132352 Xenopus tropicalis 24.52 3.00e-10 58.20
Created Date 25-Jun-2017

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