iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AT2G37160	AT2G37160.1	AT2G37160.1
AT2G37160	AT2G37160.3	AT2G37160.3
AT2G37160	AT2G37160.4	AT2G37160.4
AT2G37160	AT2G37160.2	AT2G37160.2

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
TRANSFAC
Protein-protein Interaction
iRefIndex	HINT
Post-translational Modifications (PTMs)
dbPPT
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.40e-19	70.3	333	367

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 4    dsvtclaf.sd.tllvsGsdDgtikvWDlrtgvll 36
           + ++++af +d  +l++ ++Dg ++++D++t++l+
   Q: 333  GAINSIAFsNDgAYLATVGRDGYLRIFDFSTQKLV 367
           579******999*****************999886 PP

Organism

Arabidopsis thaliana

Protein Sequence
(Fasta)

MMNTSNGMIS GPSSSSASAA NPQSPGIKTY FKTPEGKYKL HYEKTHPSGL LHYTHGKTVT 60
QVLCKNIKCT FHFYVLKVVS ENGFVKFWCQ VTLAHLKDKP APSTPTGTSS SSTASSGFRS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTAATCTTTT TGATCCAGTA GCCATTGGCG AATCCAGGAG TATTAAAGTT CCATTTTGAT 60
TTTGGCGACG ATGATGAACA GAGTTTAGAG AAATTTGCAT TGAAGAAGAG AAGATTTTTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0016579--P:protein deubiquitination

KEGG

ath:AT2G37160

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001749	Ailuropoda melanoleuca	39.12	4.00e-57	215.00
IUUC-Apl-003710	Anas platyrhynchos	40.13	3.00e-55	209.00
IUUC-Aca-004914	Anolis carolinensis	38.53	7.00e-57	214.00
IUUC-Aly-005833	Arabidopsis lyrata	92.12	0.00e+00	909.00
IUUC-Ame-010700	Astyanax mexicanus	37.68	3.00e-56	212.00
IUUC-Bta-013293	Bos taurus	37.29	3.00e-54	205.00
IUUC-Cel-018407	Caenorhabditis elegans	33.77	1.00e-41	164.00
IUUC-Cja-019007	Callithrix jacchus	34.81	1.00e-53	203.00
IUUC-Cfa-020697	Canis familiaris	42.66	3.00e-42	165.00
IUUC-Cpo-022464	Cavia porcellus	36.89	3.00e-52	198.00
IUUC-Csa-023594	Chlorocebus sabaeus	38.82	4.00e-57	214.00
IUUC-Cho-024294	Choloepus hoffmanni	37.14	4.00e-39	155.00
IUUC-Cin-025617	Ciona intestinalis	34.89	1.00e-30	126.00
IUUC-Csv-026120	Ciona savignyi	36.73	1.00e-29	122.00
IUUC-Cne-026940	Cryptococcus neoformans	32.64	6.00e-34	138.00
IUUC-Cme-027228	Cyanidioschyzon merolae	24.80	6.00e-16	79.30
IUUC-Dre-027892	Danio rerio	37.39	2.00e-55	209.00
IUUC-Dno-029016	Dasypus novemcinctus	38.24	7.00e-56	211.00
IUUC-Dor-030179	Dipodomys ordii	39.68	5.00e-53	201.00
IUUC-Eca-033704	Equus caballus	39.81	1.00e-54	206.00
IUUC-Eeu-034912	Erinaceus europaeus	46.67	9.00e-40	157.00
IUUC-Fca-036140	Felis catus	38.53	2.00e-57	216.00
IUUC-Fal-037163	Ficedula albicollis	38.94	5.00e-57	214.00
IUUC-Gmo-039005	Gadus morhua	36.78	5.00e-56	211.00
IUUC-Gga-040768	Gallus gallus	38.94	3.00e-57	215.00
IUUC-Gac-042372	Gasterosteus aculeatus	36.78	3.00e-56	212.00
IUUC-Ggo-045322	Gorilla gorilla	35.81	2.00e-53	203.00
IUUC-Hsa-046440	Homo sapiens	35.32	4.00e-54	205.00
IUUC-Itr-048055	Ictidomys tridecemlineatus	38.24	4.00e-56	211.00
IUUC-Lch-049678	Latimeria chalumnae	38.24	3.00e-56	212.00
IUUC-Loc-051970	Lepisosteus oculatus	37.97	1.00e-56	213.00
IUUC-Laf-053660	Loxodonta africana	38.53	1.00e-56	213.00
IUUC-Mcc-055671	Macaca mulatta	38.24	4.00e-56	211.00
IUUC-Meu-056033	Macropus eugenii	35.74	2.00e-47	182.00
IUUC-Mla-059179	Melampsora laricipopulina	31.37	2.00e-34	140.00
IUUC-Mga-059701	Meleagris gallopavo	40.13	2.00e-55	209.00
IUUC-Mmr-060982	Microcebus murinus	34.71	3.00e-53	202.00
IUUC-Mdo-062998	Monodelphis domestica	38.82	4.00e-57	215.00
IUUC-Mmu-064199	Mus musculus	37.29	5.00e-57	214.00
IUUC-Mpu-066310	Mustela putorius furo	38.24	3.00e-56	212.00
IUUC-Mlu-068216	Myotis lucifugus	38.24	3.00e-57	215.00
IUUC-Nle-069233	Nomascus leucogenys	38.82	5.00e-57	214.00
IUUC-Opr-071024	Ochotona princeps	38.24	5.00e-52	198.00
IUUC-Ont-072202	Oreochromis niloticus	37.86	4.00e-56	212.00
IUUC-Oan-073075	Ornithorhynchus anatinus	40.00	2.00e-55	209.00
IUUC-Ocu-073978	Oryctolagus cuniculus	38.82	4.00e-57	215.00
IUUC-Ola-086647	Oryzias latipes	37.57	3.00e-55	209.00
IUUC-Oga-088879	Otolemur garnettii	37.22	2.00e-55	209.00
IUUC-Oar-089333	Ovis aries	37.29	6.00e-56	211.00
IUUC-Ptr-090538	Pan troglodytes	35.54	4.00e-54	205.00
IUUC-Pan-092473	Papio anubis	38.82	6.00e-57	214.00
IUUC-Psi-094013	Pelodiscus sinensis	38.82	5.00e-57	214.00
IUUC-Pfo-096374	Poecilia formosa	37.07	9.00e-56	211.00
IUUC-Pab-098503	Pongo abelii	38.82	5.00e-57	214.00
IUUC-Pca-100287	Procavia capensis	37.87	1.00e-56	213.00
IUUC-Pva-102826	Pteropus vampyrus	38.24	4.00e-57	214.00
IUUC-Pgr-103681	Puccinia graminis	26.89	5.00e-32	132.00
IUUC-Rno-106076	Rattus norvegicus	38.53	3.00e-56	212.00
IUUC-Sha-107220	Sarcophilus harrisii	38.53	1.00e-56	214.00
IUUC-Sar-113582	Sorex araneus	39.74	7.00e-45	174.00
IUUC-Ssc-116048	Sus scrofa	39.12	4.00e-58	218.00
IUUC-Tgu-116514	Taeniopygia guttata	38.83	2.00e-48	186.00
IUUC-Tru-117827	Takifugu rubripes	37.03	5.00e-55	208.00
IUUC-Tsy-119611	Tarsius syrichta	38.82	4.00e-57	215.00
IUUC-Tni-120859	Tetraodon nigroviridis	37.86	3.00e-56	212.00
IUUC-Tme-126969	Tuber melanosporum	33.33	9.00e-60	223.00
IUUC-Tbe-127985	Tupaia belangeri	36.75	4.00e-45	175.00
IUUC-Ttr-128936	Tursiops truncatus	38.24	5.00e-57	214.00
IUUC-Xtr-131864	Xenopus tropicalis	38.82	6.00e-57	214.00
IUUC-Xma-134123	Xiphophorus maculatus	37.36	4.00e-56	211.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence