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Tag Content
UUCD2 ID IUUC-Ola-086504
UUCD1 version UUC-OrL-00616
Ensembl Protein ID ENSORLP00000014457.1
UniProt Accession H2M7K0; H2M7K0_ORYLA
Genbank Protein ID ENSORLP00000014457
Protein Name Uncharacterized protein
Genbank Nucleotide ID BAAF04002272
Gene Name snrnp40
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSORLG00000011539.1 ENSORLT00000014458.1 ENSORLP00000014457.1
ENSORLG00000011539.1 ENSORLT00000014459.1 ENSORLP00000014458.1
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 2.60e-43 144.4 232 264
UBD/Beta-Prp 3.40e-63 213.9 61 264
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD
   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlr 31
           gH+dsvt+l++ s+  +l+s s D+t+++WD+r
   Q: 232  GHSDSVTGLSLsSEgSYLLSNSMDNTVRIWDVR 264
           8**********98889***************97 PP
   

   UBD/Beta-Prp
   S: 48   lsgheaevtavkfspdgkilvtgseDrtikvwdls.tgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsg 135
           +sghe+ev+++kf+p+g +l++++ Dr+i +w++   ++   tlkgh+  v+ l+++ +g+ l s+s d+t+ +wd etg+ ++  l+g
   Q: 61   MSGHEGEVYCCKFHPNGATLASSGFDRLIFLWNVFgECENYATLKGHSGAVMELHYNTDGSLLFSASTDKTVGIWDSETGERIK-RLKG 148
           69******************************8875899999******************************************.**** PP
   S: 136  hdgvvncvvvhpdg.nllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtd 223
           h+++vn+      g +l+ +Gs+D+t++lWd++ +  ++t++  +t +v  ++f++++ +++sg+ d+++k+wdl++++ ++ ++gh+d
   Q: 149  HTSFVNTCYPARRGpQLVCTGSDDGTIKLWDIRKKAAIHTFQ--NTYQVLAVTFNDTSDQILSGGIDNDIKVWDLRQNKLIYNMHGHSD 235
           *****************************************7..6******************************************** PP
   S: 224  nvksvrfspnderlvsgssDgsiriWdlr 252
            v+ + +s+++ +l+s s+D+++riWd+r
   Q: 236  SVTGLSLSSEGSYLLSNSMDNTVRIWDVR 264
           ***************************98 PP
   
Organism Oryzias latipes
Protein Sequence
(Fasta)
MIEPKKRAGD MAVIPTAVKR ARNELVAAAQ SQQLVATTKS GRKKQKGPPR TSSLQAPIML 60
MSGHEGEVYC CKFHPNGATL ASSGFDRLIF LWNVFGECEN YATLKGHSGA VMELHYNTDG 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Ola-086504|E3,WD_repeat;UBD,Beta-Prp|Oryzias latipes
Please wait for a moment...
Nucleotide Sequence
(Fasta)
GGAAACACTT CATCCTGATT TCTTCGTTGG TGCTACGCTT TTCTCGTTTC CCATGAAGGC 60
GCAAATAGTC ATTCGGTAAA CCGTAGTCAC AAACAAACTT ATTTTTGTCG ATTATTTGCA 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Ola-086504|E3,WD_repeat;UBD,Beta-Prp|Oryzias latipes
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat
Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
Pfam

PF00400--WD40
PRINTS

PR00320--GPROTEINBRPT
SMART

SM00320--WD40
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000138 Aegilops tauschii 56.96 3.00e-116 411.00
IUUC-Aml-001428 Ailuropoda melanoleuca 81.82 1.00e-161 561.00
IUUC-Atr-003164 Amborella trichopoda 58.16 2.00e-122 431.00
IUUC-Apl-003447 Anas platyrhynchos 89.90 1.00e-153 535.00
IUUC-Aca-004270 Anolis carolinensis 75.83 1.00e-162 565.00
IUUC-Aly-005659 Arabidopsis lyrata 61.17 1.00e-121 429.00
IUUC-Ath-006764 Arabidopsis thaliana 60.52 4.00e-121 427.00
IUUC-Acl-008324 Aspergillus clavatus 46.31 4.00e-93 334.00
IUUC-Afl-008607 Aspergillus flavus 47.99 6.00e-87 313.00
IUUC-Afu-008998 Aspergillus fumigatus 46.31 2.00e-93 335.00
IUUC-Ani-009363 Aspergillus nidulans 47.40 1.00e-92 332.00
IUUC-Ang-009513 Aspergillus niger 48.51 1.00e-84 306.00
IUUC-Aor-010237 Aspergillus oryzae 49.03 1.00e-92 333.00
IUUC-Ate-010374 Aspergillus terreus 45.78 3.00e-81 295.00
IUUC-Ame-010728 Astyanax mexicanus 85.11 0.00e+00 629.00
IUUC-Bgr-012297 Blumeria graminis 47.99 2.00e-71 261.00
IUUC-Bta-012433 Bos taurus 81.11 3.00e-168 583.00
IUUC-Bci-013763 Botrytis cinerea 49.51 1.00e-92 332.00
IUUC-Bdi-014490 Brachypodium distachyon 56.96 9.00e-116 409.00
IUUC-Bol-016479 Brassica oleracea 59.55 2.00e-120 425.00
IUUC-Bra-017219 Brassica rapa 59.87 5.00e-121 427.00
IUUC-Cel-018512 Caenorhabditis elegans 54.85 2.00e-111 395.00
IUUC-Cja-019308 Callithrix jacchus 81.39 3.00e-170 590.00
IUUC-Cfa-020998 Canis familiaris 81.67 3.00e-170 590.00
IUUC-Cpo-021580 Cavia porcellus 82.22 2.00e-168 584.00
IUUC-Cre-022859 Chlamydomonas reinhardtii 55.08 5.00e-110 390.00
IUUC-Csa-023456 Chlorocebus sabaeus 81.51 3.00e-170 590.00
IUUC-Cho-024644 Choloepus hoffmanni 90.00 3.00e-168 583.00
IUUC-Cin-025463 Ciona intestinalis 58.76 5.00e-129 453.00
IUUC-Cgl-026497 Colletotrichum gloeosporioides 47.57 1.00e-92 333.00
IUUC-Cne-026780 Cryptococcus neoformans 40.06 1.00e-69 256.00
IUUC-Dre-027671 Danio rerio 85.39 0.00e+00 643.00
IUUC-Dno-029769 Dasypus novemcinctus 82.45 2.00e-171 594.00
IUUC-Dor-030776 Dipodomys ordii 71.67 3.00e-72 265.00
IUUC-Dse-031316 Dothistroma septosporum 43.75 6.00e-84 303.00
IUUC-Dme-031756 Drosophila melanogaster 56.00 2.00e-125 441.00
IUUC-Ete-032753 Echinops telfairi 76.47 4.00e-147 513.00
IUUC-Eca-033979 Equus caballus 81.11 3.00e-168 583.00
IUUC-Eeu-034862 Erinaceus europaeus 89.93 6.00e-67 247.00
IUUC-Fca-036110 Felis catus 80.97 7.00e-141 492.00
IUUC-Fal-037648 Ficedula albicollis 89.71 6.00e-168 583.00
IUUC-Fox-037861 Fusarium oxysporum 46.93 6.00e-92 330.00
IUUC-Fso-038405 Fusarium solani 45.95 6.00e-91 327.00
IUUC-Gmo-039383 Gadus morhua 88.76 0.00e+00 648.00
IUUC-Ggr-040082 Gaeumannomyces graminis 45.31 2.00e-80 292.00
IUUC-Gga-040785 Gallus gallus 83.29 8.00e-170 589.00
IUUC-Gac-041645 Gasterosteus aculeatus 91.29 0.00e+00 635.00
IUUC-Gma-044329 Glycine max 60.19 1.00e-119 422.00
IUUC-Ggo-044800 Gorilla gorilla 73.49 5.00e-140 490.00
IUUC-Hsa-045918 Homo sapiens 81.51 3.00e-170 590.00
IUUC-Hvu-047342 Hordeum vulgare 56.96 8.00e-116 409.00
IUUC-Itr-048047 Ictidomys tridecemlineatus 76.92 3.00e-97 347.00
IUUC-Kpa-049149 Komagataella pastoris 33.98 4.00e-36 145.00
IUUC-Lch-050395 Latimeria chalumnae 81.56 0.00e+00 630.00
IUUC-Lpe-051275 Leersia perrieri 57.28 2.00e-116 412.00
IUUC-Loc-052666 Lepisosteus oculatus 87.22 5.00e-178 616.00
IUUC-Lma-053129 Leptosphaeria maculans 42.18 7.00e-87 313.00
IUUC-Laf-054512 Loxodonta africana 82.91 2.00e-169 587.00
IUUC-Mcc-055819 Macaca mulatta 81.51 5.00e-170 590.00
IUUC-Meu-056350 Macropus eugenii 73.00 8.00e-143 499.00
IUUC-Mor-057063 Magnaporthe oryzae 47.76 6.00e-91 327.00
IUUC-Mpo-057369 Magnaporthe poae 46.28 1.00e-81 296.00
IUUC-Mtr-058228 Medicago truncatula 59.87 1.00e-119 422.00
IUUC-Mla-059093 Melampsora laricipopulina 39.62 5.00e-69 254.00
IUUC-Mga-059719 Meleagris gallopavo 88.96 1.00e-168 585.00
IUUC-Mvi-060285 Microbotryum violaceum 37.93 2.00e-65 243.00
IUUC-Mmr-061685 Microcebus murinus 75.56 1.00e-150 525.00
IUUC-Mdo-062121 Monodelphis domestica 80.72 9.00e-166 575.00
IUUC-Mmu-063216 Mus musculus 81.67 2.00e-171 594.00
IUUC-Mac-065463 Musa acuminata 51.01 2.00e-108 385.00
IUUC-Mpu-066390 Mustela putorius furo 82.22 9.00e-172 595.00
IUUC-Mlu-066932 Myotis lucifugus 80.81 3.00e-160 557.00
IUUC-Nfi-068509 Neosartorya fischeri 46.31 2.00e-93 335.00
IUUC-Ncr-068870 Neurospora crassa 47.20 3.00e-91 328.00
IUUC-Nle-069539 Nomascus leucogenys 81.51 7.00e-170 589.00
IUUC-Opr-070555 Ochotona princeps 70.00 5.00e-149 520.00
IUUC-Ont-071490 Oreochromis niloticus 91.32 0.00e+00 657.00
IUUC-Oan-073044 Ornithorhynchus anatinus 72.05 8.00e-142 496.00
IUUC-Ocu-073764 Oryctolagus cuniculus 81.94 4.00e-172 597.00
IUUC-Oba-075704 Oryza barthii 57.93 2.00e-116 411.00
IUUC-Obr-076455 Oryza brachyantha 57.61 5.00e-116 410.00
IUUC-Ogl-077382 Oryza glaberrima 58.25 9.00e-117 412.00
IUUC-Ogu-078739 Oryza glumaepatula 57.93 1.00e-116 412.00
IUUC-Oin-079072 Oryza indica 57.93 1.00e-116 412.00
IUUC-Olo-080809 Oryza longistaminata 57.93 1.00e-116 412.00
IUUC-Ome-081677 Oryza meridionalis 57.93 3.00e-116 410.00
IUUC-Oni-082937 Oryza nivara 57.93 1.00e-116 412.00
IUUC-Opu-083510 Oryza punctata 57.93 1.00e-116 412.00
IUUC-Oru-084360 Oryza rufipogon 57.93 1.00e-116 412.00
IUUC-Osa-085640 Oryza sativa 57.93 1.00e-116 412.00
IUUC-Olu-087869 Ostreococcus lucimarinus 40.46 2.00e-63 235.00
IUUC-Oga-088773 Otolemur garnettii 81.39 1.00e-169 588.00
IUUC-Oar-089677 Ovis aries 80.44 2.00e-166 578.00
IUUC-Ptr-090724 Pan troglodytes 80.58 6.00e-162 563.00
IUUC-Pan-092683 Papio anubis 81.51 3.00e-170 590.00
IUUC-Psi-093415 Pelodiscus sinensis 90.88 6.00e-167 579.00
IUUC-Pma-094562 Petromyzon marinus 75.98 7.00e-170 589.00
IUUC-Pno-095014 Phaeosphaeria nodorum 44.02 1.00e-86 313.00
IUUC-Ppa-095822 Physcomitrella patens 56.58 2.00e-121 428.00
IUUC-Pfo-096579 Poecilia formosa 91.85 0.00e+00 639.00
IUUC-Pab-098313 Pongo abelii 81.51 3.00e-170 590.00
IUUC-Pop-099747 Populus trichocarpa 56.81 2.00e-122 431.00
IUUC-Pca-100871 Procavia capensis 76.07 7.00e-121 426.00
IUUC-Ppe-101389 Prunus persica 62.14 9.00e-124 436.00
IUUC-Pva-102468 Pteropus vampyrus 67.50 5.00e-130 457.00
IUUC-Pgr-103523 Puccinia graminis 39.20 2.00e-73 268.00
IUUC-Ptt-103930 Puccinia triticina 39.71 1.00e-72 266.00
IUUC-Pte-104299 Pyrenophora teres 44.41 2.00e-90 325.00
IUUC-Pyt-104564 Pyrenophora triticirepentis 44.71 1.00e-90 326.00
IUUC-Rno-105796 Rattus norvegicus 81.67 4.00e-170 590.00
IUUC-Sha-107191 Sarcophilus harrisii 80.44 9.00e-166 575.00
IUUC-Sja-107952 Schizosaccharomyces japonicus 37.92 6.00e-64 237.00
IUUC-Spo-108249 Schizosaccharomyces pombe 44.44 7.00e-79 286.00
IUUC-Ssl-108448 Sclerotinia sclerotiorum 48.54 9.00e-92 330.00
IUUC-Sit-110805 Setaria italica 56.96 3.00e-116 411.00
IUUC-Sly-111567 Solanum lycopersicum 61.49 7.00e-123 433.00
IUUC-Stu-112562 Solanum tuberosum 58.73 7.00e-124 436.00
IUUC-Sar-112991 Sorex araneus 89.95 1.00e-113 402.00
IUUC-Sbi-114010 Sorghum bicolor 56.96 4.00e-116 410.00
IUUC-Sre-114947 Sporisorium reilianum 43.30 1.00e-73 270.00
IUUC-Ssc-115371 Sus scrofa 81.11 3.00e-168 583.00
IUUC-Tgu-117429 Taeniopygia guttata 87.30 1.00e-165 575.00
IUUC-Tru-118081 Takifugu rubripes 92.76 0.00e+00 643.00
IUUC-Tsy-119101 Tarsius syrichta 70.56 2.00e-141 495.00
IUUC-Tni-120532 Tetraodon nigroviridis 91.85 0.00e+00 635.00
IUUC-Tca-121373 Theobroma cacao 61.09 2.00e-122 431.00
IUUC-Tre-122050 Trichoderma reesei 45.63 4.00e-90 324.00
IUUC-Tvi-122394 Trichoderma virens 46.76 1.00e-85 309.00
IUUC-Tae-124661 Triticum aestivum 57.10 2.00e-115 408.00
IUUC-Tme-126998 Tuber melanosporum 48.54 5.00e-90 324.00
IUUC-Tbe-128032 Tupaia belangeri 82.22 1.00e-170 592.00
IUUC-Ttr-129102 Tursiops truncatus 72.50 4.00e-141 493.00
IUUC-Uma-129363 Ustilago maydis 41.46 4.00e-77 281.00
IUUC-Vda-129891 Verticillium dahliae 47.04 4.00e-92 331.00
IUUC-Vpa-130827 Vicugna pacos 81.11 6.00e-168 582.00
IUUC-Vvi-131202 Vitis vinifera 60.84 4.00e-121 427.00
IUUC-Xtr-132769 Xenopus tropicalis 78.89 2.00e-164 571.00
IUUC-Xma-133147 Xiphophorus maculatus 91.85 0.00e+00 638.00
IUUC-Yli-134352 Yarrowia lipolytica 35.08 4.00e-37 148.00
IUUC-Zma-135294 Zea mays 56.96 8.00e-116 409.00
Created Date 25-Jun-2017

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