iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Aly-006467

UUCD1 version

UUC-ArL-00627

Ensembl Protein ID

Al_scaffold_0002_1164

UniProt Accession

D7KT42; D7KT42_ARALL

Genbank Protein ID

EFH64735.1

Protein Name

Predicted protein

Genbank Nucleotide ID

GL348714

Gene Name

ARALYDRAFT_676014

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Al_scaffold_0002_1164	Al_scaffold_0002_1164	Al_scaffold_0002_1164

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	2.60e-06	28.1	127	172
E3 activity/RING/RING	3.60e-12	47.3	129	168

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 6    flCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplt 51
             C+I  +l++ P ++p+G+ +  ++ ekw+ +g+ tc ++r+++ 
   Q: 127  IFCSICIQLPERPITTPCGHNFCLRCFEKWVGQGKLTCMTCRTKIP 172
           57***************************************99875 PP

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iC + +++ p+++pCgH f++ C++kw     + +++ +C +Cr
   Q: 129  CSICIQLPER-PITTPCGHNFCLRCFEKW-----VGQGKLTCMTCR 168
           **********.******************.....9**********8 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MAPEVQFPCD GDGVCMRCQV KPPSEETLTC GTCVTPWHVS CLLPESLSSS TGEWQCPDCS 60
GDVVSSAVPV TGNVGFESSG SVLVAAIRAI QADLTLTEAE KAKRRQKLMS GGGDDRLVEE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGCCTG AAGTTCAGTT TCCTTGCGAC GGAGACGGCG TATGTATGCG GTGCCAGGTA 60
AAACCTCCGT CAGAAGAGAC TCTCACGTGT GGCACGTGCG TCACTCCCTG GCACGTGTCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR015947--PUA-like_domain
IPR003105--SRA_YDG
IPR019786--Zinc_finger_PHD-type_CS
IPR027370--Znf-RING_LisH
IPR018957--Znf_C3HC4_RING-type
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS51015--YDG
PS01359--ZF_PHD_1
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF02182--SAD_SRA
PF00097--zf-C3HC4
PF13445--zf-RING_UBOX

SMART

SM00249--PHD
SM00184--RING
SM00466--SRA

Gene Ontology

GO:0005634--C:nucleus
GO:0008270--F:zinc ion binding

KEGG

aly:ARALYDRAFT_676014

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-007096	Arabidopsis thaliana	85.31	0.00e+00	1033.00
IUUC-Ame-011845	Astyanax mexicanus	34.07	1.00e-46	180.00
IUUC-Dre-028200	Danio rerio	33.99	3.00e-47	182.00
IUUC-Ete-032375	Echinops telfairi	25.33	2.00e-09	57.80
IUUC-Fox-037671	Fusarium oxysporum	44.44	9.00e-05	39.70
IUUC-Ggr-039874	Gaeumannomyces graminis	31.30	8.00e-10	57.80

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence