iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSDARG00000103409.1	ENSDART00000169317.1	ENSDARP00000135054.1
ENSDARG00000103409.1	ENSDART00000171262.1	ENSDARP00000131310.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	3.80e-08	34.3	316	363
ULD/UDP/UBQ/UBQ_PIM	5.20e-14	52.9	1	76

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 4    ClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCrs 53
           C+vCg +++ +k  + C++C+ +fH  Cl+++  ++ p++e+w+Cp+Cr+
   Q: 316  CHVCGIKQDPDK-QLLCDECDMAFHTYCLNPP-LTTIPDDEDWYCPDCRN 363
           *********997.566****************.***************85 PP

ULD/UDP/UBQ/UBQ_PIM

   S: 1    mkltvktlkgke.fel.evseddtveelKekiakesgvppeqqkLIyaGkiLkDdttLselgikdgsvvhlvvkks 74
           m+++v+t++gke  ++ ++s+ ++v el+ kia+ ++v+pe+q+L y Gk+++D  t+ ++++  +++v l+v+++
   Q: 1    MWIQVRTMDGKEtHRVdSLSKLTKVDELRVKIAELFNVEPERQRLFYRGKQMEDGHTIFDYNVGLNDIVQLLVRQA 76
           89**********76677899999*************************************************9985 PP

Organism

Danio rerio

Protein Sequence
(Fasta)

MWIQVRTMDG KETHRVDSLS KLTKVDELRV KIAELFNVEP ERQRLFYRGK QMEDGHTIFD 60
YNVGLNDIVQ LLVRQAVAAT VLPKDKEAEL SDSDSGCGSA QSESDKGSTH GESDVQSAGA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TCGCGGCAGG ACTGAACTCT AACAAAAGTG CAGCGTTTTC ACACTTTCAT CACATTCACT 60
GAATCAAAAT CACCTCTTCT GTTCCCGAGA AGAAGATAAC AGGTAAAGAG CTGATTTTAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-0539--Nucleus
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR015947--PUA-like_domain
IPR014722--Rib_L2_dom2
IPR003105--SRA_YDG
IPR021991--TTD_dom
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom
IPR019786--Zinc_finger_PHD-type_CS
IPR018957--Znf_C3HC4_RING-type
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS50053--UBIQUITIN_2
PS51015--YDG
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00628--PHD
PF02182--SAD_SRA
PF12148--TTD
PF00240--ubiquitin
PF00097--zf-C3HC4

SMART

SM00249--PHD
SM00184--RING
SM00466--SRA
SM00213--UBQ

Gene Ontology

GO:0005634--C:nucleus
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000242	Aegilops tauschii	51.03	2.00e-42	167.00
IUUC-Aml-001285	Ailuropoda melanoleuca	67.12	0.00e+00	1041.00
IUUC-Atr-002603	Amborella trichopoda	50.00	3.00e-43	170.00
IUUC-Apl-003819	Anas platyrhynchos	73.79	0.00e+00	1070.00
IUUC-Aca-005287	Anolis carolinensis	58.40	0.00e+00	957.00
IUUC-Aly-006467	Arabidopsis lyrata	33.82	2.00e-47	183.00
IUUC-Ath-006667	Arabidopsis thaliana	35.07	6.00e-49	189.00
IUUC-Ame-011845	Astyanax mexicanus	87.33	0.00e+00	1306.00
IUUC-Bta-012600	Bos taurus	66.54	0.00e+00	1031.00
IUUC-Bci-013703	Botrytis cinerea	30.54	9.00e-11	61.60
IUUC-Bdi-014586	Brachypodium distachyon	34.69	3.00e-46	180.00
IUUC-Bol-015519	Brassica oleracea	34.56	2.00e-48	187.00
IUUC-Bra-017110	Brassica rapa	34.80	8.00e-49	188.00
IUUC-Cja-018864	Callithrix jacchus	66.50	0.00e+00	1051.00
IUUC-Cfa-020558	Canis familiaris	68.66	0.00e+00	1046.00
IUUC-Cpo-022125	Cavia porcellus	67.09	0.00e+00	1049.00
IUUC-Cre-022645	Chlamydomonas reinhardtii	35.61	5.00e-21	96.70
IUUC-Csa-023649	Chlorocebus sabaeus	63.06	0.00e+00	996.00
IUUC-Cho-024857	Choloepus hoffmanni	52.80	1.00e-159	556.00
IUUC-Cin-025454	Ciona intestinalis	54.12	0.00e+00	784.00
IUUC-Cgl-026498	Colletotrichum gloeosporioides	31.03	2.00e-10	60.80
IUUC-Cne-026942	Cryptococcus neoformans	45.24	1.00e-28	119.00
IUUC-Dno-029950	Dasypus novemcinctus	53.89	0.00e+00	856.00
IUUC-Dor-031084	Dipodomys ordii	66.71	0.00e+00	1046.00
IUUC-Ete-032375	Echinops telfairi	45.74	4.00e-69	256.00
IUUC-Eca-033266	Equus caballus	67.87	0.00e+00	1030.00
IUUC-Eeu-035077	Erinaceus europaeus	76.49	8.00e-133	466.00
IUUC-Fca-035685	Felis catus	60.34	8.00e-115	408.00
IUUC-Fal-037550	Ficedula albicollis	70.20	0.00e+00	993.00
IUUC-Gmo-039452	Gadus morhua	80.46	0.00e+00	1246.00
IUUC-Ggr-039874	Gaeumannomyces graminis	26.52	3.00e-09	57.00
IUUC-Gga-040484	Gallus gallus	73.58	0.00e+00	1158.00
IUUC-Gac-042196	Gasterosteus aculeatus	80.61	0.00e+00	1268.00
IUUC-Gma-042831	Glycine max	33.25	2.00e-45	177.00
IUUC-Ggo-045414	Gorilla gorilla	66.54	0.00e+00	1061.00
IUUC-Hsa-046236	Homo sapiens	66.54	0.00e+00	1060.00
IUUC-Hvu-047471	Hordeum vulgare	35.47	6.00e-45	175.00
IUUC-Itr-047867	Ictidomys tridecemlineatus	66.12	0.00e+00	1030.00
IUUC-Lch-050162	Latimeria chalumnae	71.79	0.00e+00	1091.00
IUUC-Lpe-050756	Leersia perrieri	34.85	8.00e-44	172.00
IUUC-Loc-051806	Lepisosteus oculatus	83.74	0.00e+00	1318.00
IUUC-Lma-052953	Leptosphaeria maculans	31.15	3.00e-10	60.50
IUUC-Laf-053671	Loxodonta africana	65.14	0.00e+00	1063.00
IUUC-Mcc-055513	Macaca mulatta	66.25	0.00e+00	1061.00
IUUC-Meu-056189	Macropus eugenii	48.27	1.00e-102	367.00
IUUC-Mtr-058805	Medicago truncatula	34.49	5.00e-49	189.00
IUUC-Mla-058836	Melampsora laricipopulina	43.27	5.00e-32	132.00
IUUC-Mga-059759	Meleagris gallopavo	72.10	0.00e+00	1037.00
IUUC-Mvi-060378	Microbotryum violaceum	43.75	3.00e-32	132.00
IUUC-Mmr-060600	Microcebus murinus	61.58	0.00e+00	896.00
IUUC-Mdo-061911	Monodelphis domestica	73.04	0.00e+00	1145.00
IUUC-Mmu-063738	Mus musculus	63.26	0.00e+00	975.00
IUUC-Mac-064697	Musa acuminata	34.73	4.00e-49	189.00
IUUC-Mpu-065696	Mustela putorius furo	67.62	0.00e+00	1035.00
IUUC-Mlu-067538	Myotis lucifugus	62.48	0.00e+00	999.00
IUUC-Nle-069901	Nomascus leucogenys	53.15	0.00e+00	793.00
IUUC-Opr-070813	Ochotona princeps	54.18	1.00e-134	473.00
IUUC-Ont-072292	Oreochromis niloticus	82.78	0.00e+00	1277.00
IUUC-Oan-073109	Ornithorhynchus anatinus	68.12	1.00e-178	619.00
IUUC-Ocu-074748	Oryctolagus cuniculus	52.96	0.00e+00	784.00
IUUC-Oba-075108	Oryza barthii	34.40	1.00e-43	171.00
IUUC-Obr-076572	Oryza brachyantha	34.67	7.00e-44	172.00
IUUC-Ogl-077177	Oryza glaberrima	34.58	1.00e-43	171.00
IUUC-Ogu-078298	Oryza glumaepatula	34.58	2.00e-43	171.00
IUUC-Oin-079911	Oryza indica	34.40	2.00e-43	171.00
IUUC-Olo-080374	Oryza longistaminata	46.63	2.00e-34	140.00
IUUC-Ome-081137	Oryza meridionalis	48.47	3.00e-34	140.00
IUUC-Oni-082620	Oryza nivara	34.40	1.00e-43	171.00
IUUC-Opu-083974	Oryza punctata	33.08	1.00e-43	172.00
IUUC-Oru-084976	Oryza rufipogon	34.58	2.00e-43	170.00
IUUC-Osa-085339	Oryza sativa	34.58	2.00e-43	170.00
IUUC-Ola-086416	Oryzias latipes	79.22	0.00e+00	1231.00
IUUC-Oga-088221	Otolemur garnettii	66.42	0.00e+00	1053.00
IUUC-Oar-089604	Ovis aries	63.14	0.00e+00	949.00
IUUC-Ptr-090559	Pan troglodytes	66.83	0.00e+00	1061.00
IUUC-Pan-092855	Papio anubis	66.25	0.00e+00	1063.00
IUUC-Psi-093033	Pelodiscus sinensis	58.04	0.00e+00	879.00
IUUC-Pma-094339	Petromyzon marinus	67.62	0.00e+00	986.00
IUUC-Ppa-095940	Physcomitrella patens	34.65	1.00e-47	184.00
IUUC-Pfo-096243	Poecilia formosa	79.47	0.00e+00	1231.00
IUUC-Pab-098243	Pongo abelii	66.50	0.00e+00	1048.00
IUUC-Pop-099561	Populus trichocarpa	36.17	3.00e-51	196.00
IUUC-Pca-100503	Procavia capensis	64.30	0.00e+00	981.00
IUUC-Ppe-101961	Prunus persica	35.48	8.00e-50	191.00
IUUC-Pva-102240	Pteropus vampyrus	66.27	0.00e+00	868.00
IUUC-Pgr-103644	Puccinia graminis	48.17	4.00e-33	136.00
IUUC-Ptt-103867	Puccinia triticina	42.78	2.00e-32	134.00
IUUC-Pyt-104740	Pyrenophora triticirepentis	30.43	9.00e-12	65.90
IUUC-Rno-105345	Rattus norvegicus	62.52	0.00e+00	968.00
IUUC-Sha-106618	Sarcophilus harrisii	72.72	0.00e+00	1141.00
IUUC-Smo-109556	Selaginella moellendorffii	37.58	4.00e-40	159.00
IUUC-Sit-110588	Setaria italica	36.66	5.00e-46	179.00
IUUC-Sly-111415	Solanum lycopersicum	33.83	9.00e-51	195.00
IUUC-Stu-112842	Solanum tuberosum	34.08	7.00e-50	192.00
IUUC-Sar-113546	Sorex araneus	50.49	4.00e-81	296.00
IUUC-Sbi-114726	Sorghum bicolor	36.39	5.00e-46	179.00
IUUC-Sre-115182	Sporisorium reilianum	43.27	5.00e-32	132.00
IUUC-Ssc-116081	Sus scrofa	64.98	0.00e+00	1025.00
IUUC-Tgu-116538	Taeniopygia guttata	72.60	0.00e+00	923.00
IUUC-Tru-117599	Takifugu rubripes	79.70	0.00e+00	1210.00
IUUC-Tsy-119249	Tarsius syrichta	52.67	0.00e+00	792.00
IUUC-Tni-119843	Tetraodon nigroviridis	84.17	0.00e+00	1035.00
IUUC-Tca-121781	Theobroma cacao	32.99	3.00e-46	180.00
IUUC-Tae-125473	Triticum aestivum	35.95	4.00e-45	176.00
IUUC-Tme-127149	Tuber melanosporum	46.74	9.00e-28	118.00
IUUC-Tbe-127823	Tupaia belangeri	55.59	0.00e+00	652.00
IUUC-Ttr-128522	Tursiops truncatus	66.21	0.00e+00	1036.00
IUUC-Vda-129727	Verticillium dahliae	29.01	5.00e-08	52.40
IUUC-Vpa-130073	Vicugna pacos	52.98	0.00e+00	850.00
IUUC-Vvi-131413	Vitis vinifera	34.00	3.00e-50	193.00
IUUC-Xtr-132432	Xenopus tropicalis	73.48	0.00e+00	1140.00
IUUC-Xma-133516	Xiphophorus maculatus	80.71	0.00e+00	1259.00
IUUC-Zma-135894	Zea mays	36.29	2.00e-46	181.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence