iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Cfa-021019

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAEX03013096

Gene Name

TRIM13

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSCAFG00000004308.3	ENSCAFT00000006908.3	ENSCAFP00000006395.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.80e-08	35.1	58	106

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkw....pglknssskefrCPlCr 46
           C+iC++ f+d p+vlpC H f+++Cl+ +    +  +      f+CP+Cr
   Q: 58   CPICCSLFDD-PRVLPCSHNFCKKCLEGIlegtVRNSLWRASPFKCPTCR 106
           ********99.**************9666666666666799999*****8 PP

Organism

Canis familiaris

Protein Sequence
(Fasta)

MPNVLCSSFA VASPDYPPPA RGRPHRPDCC VLGTVARPHT CSQGTEDVME LLEEDLTCPI 60
CCSLFDDPRV LPCSHNFCKK CLEGILEGTV RNSLWRASPF KCPTCRKETS ATGVNSLQVN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTGGCGGGGA GCGCGGTGGC CGCGGCGGAG GGGGCTGCCT TTTGCGGGTC CCGCGGCCCC 60
GAGGCGGAGG TCGGGGGCAG TGCCGCGGCG GGGGGGGCGG GTGCTGCGCC GCGGGCCGCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR027370--Znf-RING_LisH
IPR000315--Znf_B-box
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS50119--ZF_BBOX
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00643--zf-B_box
PF13445--zf-RING_UBOX

SMART

SM00336--BBOX
SM00184--RING

Gene Ontology

GO:0005789--C:endoplasmic reticulum membrane
GO:0016021--C:integral component of membrane
GO:0097038--C:perinuclear endoplasmic reticulum
GO:0004871--F:signal transducer activity
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding
GO:0045087--P:innate immune response
GO:1902187--P:negative regulation of viral release from host cell
GO:0032897--P:negative regulation of viral transcription
GO:0010942--P:positive regulation of cell death
GO:0043123--P:positive regulation of I-kappaB kinase/NF-kappaB signaling
GO:0016239--P:positive regulation of macroautophagy
GO:0051092--P:positive regulation of NF-kappaB transcription factor activity
GO:0051865--P:protein autoubiquitination
GO:0010332--P:response to gamma radiation
GO:0030433--P:ubiquitin-dependent ERAD pathway

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002269	Ailuropoda melanoleuca	96.82	0.00e+00	764.00
IUUC-Apl-004168	Anas platyrhynchos	75.98	1.00e-180	625.00
IUUC-Aca-004395	Anolis carolinensis	70.34	5.00e-165	573.00
IUUC-Ame-011325	Astyanax mexicanus	46.75	1.00e-67	250.00
IUUC-Bta-012613	Bos taurus	92.38	0.00e+00	729.00
IUUC-Cja-018856	Callithrix jacchus	92.67	0.00e+00	766.00
IUUC-Cpo-021845	Cavia porcellus	91.40	0.00e+00	719.00
IUUC-Csa-023380	Chlorocebus sabaeus	92.38	0.00e+00	732.00
IUUC-Cho-024733	Choloepus hoffmanni	84.16	3.00e-90	325.00
IUUC-Dre-028675	Danio rerio	48.79	1.00e-108	386.00
IUUC-Dno-030018	Dasypus novemcinctus	91.18	0.00e+00	720.00
IUUC-Dor-030599	Dipodomys ordii	89.14	2.00e-124	437.00
IUUC-Ete-033134	Echinops telfairi	88.29	0.00e+00	723.00
IUUC-Eca-033931	Equus caballus	95.11	0.00e+00	740.00
IUUC-Eeu-034903	Erinaceus europaeus	92.67	0.00e+00	731.00
IUUC-Fca-035642	Felis catus	95.58	0.00e+00	738.00
IUUC-Fal-037108	Ficedula albicollis	76.47	0.00e+00	627.00
IUUC-Gga-040903	Gallus gallus	74.75	4.00e-174	603.00
IUUC-Ggo-044635	Gorilla gorilla	92.42	0.00e+00	739.00
IUUC-Hsa-046345	Homo sapiens	92.18	0.00e+00	737.00
IUUC-Itr-048220	Ictidomys tridecemlineatus	91.22	0.00e+00	706.00
IUUC-Lch-050599	Latimeria chalumnae	59.80	1.00e-136	479.00
IUUC-Loc-052378	Lepisosteus oculatus	63.40	6.00e-117	413.00
IUUC-Laf-053332	Loxodonta africana	92.16	0.00e+00	724.00
IUUC-Mcc-054705	Macaca mulatta	91.69	0.00e+00	734.00
IUUC-Meu-056825	Macropus eugenii	84.39	0.00e+00	697.00
IUUC-Mga-059528	Meleagris gallopavo	74.26	4.00e-178	617.00
IUUC-Mmr-060688	Microcebus murinus	94.13	0.00e+00	738.00
IUUC-Mdo-061882	Monodelphis domestica	83.94	0.00e+00	704.00
IUUC-Mmu-064352	Mus musculus	87.96	0.00e+00	726.00
IUUC-Mpu-066712	Mustela putorius furo	97.10	0.00e+00	703.00
IUUC-Mlu-068093	Myotis lucifugus	92.38	0.00e+00	726.00
IUUC-Nle-069310	Nomascus leucogenys	92.38	0.00e+00	733.00
IUUC-Ont-071759	Oreochromis niloticus	58.96	7.00e-110	390.00
IUUC-Oan-073673	Ornithorhynchus anatinus	79.05	0.00e+00	678.00
IUUC-Ocu-074192	Oryctolagus cuniculus	94.62	0.00e+00	741.00
IUUC-Ola-087424	Oryzias latipes	58.06	2.00e-108	385.00
IUUC-Olu-087666	Ostreococcus lucimarinus	35.42	2.00e-10	60.10
IUUC-Oga-088808	Otolemur garnettii	94.35	0.00e+00	739.00
IUUC-Oar-089553	Ovis aries	92.42	0.00e+00	731.00
IUUC-Ptr-090518	Pan troglodytes	91.93	0.00e+00	734.00
IUUC-Pan-092781	Papio anubis	91.44	0.00e+00	732.00
IUUC-Psi-093914	Pelodiscus sinensis	75.06	1.00e-177	615.00
IUUC-Pfo-096346	Poecilia formosa	57.05	2.00e-107	382.00
IUUC-Pca-100914	Procavia capensis	90.00	0.00e+00	736.00
IUUC-Pva-102728	Pteropus vampyrus	93.40	0.00e+00	733.00
IUUC-Rno-105922	Rattus norvegicus	87.71	0.00e+00	669.00
IUUC-Sha-107124	Sarcophilus harrisii	84.60	0.00e+00	708.00
IUUC-Sja-107830	Schizosaccharomyces japonicus	36.05	4.00e-07	49.30
IUUC-Sar-113607	Sorex araneus	89.98	0.00e+00	696.00
IUUC-Ssc-116355	Sus scrofa	94.35	0.00e+00	741.00
IUUC-Tgu-116476	Taeniopygia guttata	76.23	3.00e-180	624.00
IUUC-Tru-118737	Takifugu rubripes	59.93	2.00e-112	399.00
IUUC-Tsy-118908	Tarsius syrichta	94.87	0.00e+00	745.00
IUUC-Tbe-127258	Tupaia belangeri	96.09	0.00e+00	750.00
IUUC-Vpa-130138	Vicugna pacos	93.89	0.00e+00	743.00
IUUC-Xtr-132100	Xenopus tropicalis	58.09	4.00e-132	464.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence