iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mla-058937

Ensembl Protein ID

EGG07968

UniProt Accession

F4RI95; F4RI95_MELLP

Genbank Protein ID

EGG07968.1

Protein Name

Coatomer subunit beta'

Genbank Nucleotide ID

GL883102

Gene Name

MELLADRAFT_47966

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MELLADRAFT_47966	EGG07968	EGG07968

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.80e-32	109.1	182	222
UBD/Beta-Prp	1.20e-69	234.4	13	296

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf...sd.tllvsGsdDgtikvWDlrtgvllks 38
           H+ +v+ +++    d +++v+ +dD  ik+WD+++  ++++
   Q: 182  HEKGVNYVEYyhgGDkPYMVTTGDDRLIKIWDYHSKSCIQT 222
           9999****98899778******************9999885 PP

UBD/Beta-Prp

   S: 10   ksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklv 110
           +++++ v+f+p +++l++g ++g++ vw ++tg ll+s+   e +v++ kf+ +++++v gs+D +++v++++t++ v+ +++h d++++l+++p++ +++
   Q: 13   SERVKTVDFHPTEPWLLSGLYSGKVLVWHTETGALLKSFTPTEVPVRCAKFIARKNWFVCGSDDFHLRVFNYNTSERVSGFEAHPDYIRCLAVHPTQPFVL 113
           678899*********************************************************************************************** PP
   S: 111  sGshdrtirvwdletgqcleetlsghdgvvncvvvhpdg.nllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsng..kelvsgsldgtvklwd 208
           +Gs+d ti++wd+e+ ++  ++++gh + ++ ++++p++ n ++s++lDrtv++W+l +++   tl   h++ v+ +++ + g  +++v+ ++d+ +k+wd
   Q: 114  TGSDDMTIKLWDWEKSWKCIQVFEGHAHYIMNLAFNPKDsNTFASSCLDRTVKVWSLGSQTANFTLDA-HEKGVNYVEYYHGGdkPYMVTTGDDRLIKIWD 213
           ***************998877*********************************************98.*********9988888**************** PP
   S: 209  lqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktlqlhnssvisvavlsfgdnvlvlgsedskvni 291
           +++++c++tl+gh++nv+   f+p   +++sgs+Dg+++iW   +  l +tl++  ++ ++v+++s ++n l lg ++++v i
   Q: 214  YHSKSCIQTLEGHQSNVSYAIFHPSLPIIISGSEDGTVKIWHASTYRLENTLNYGLERAWCVTYHSKKGNDLGLGFDEGSVVI 296
           **********************************************************************9977766666655 PP

Organism

Melampsora laricipopulina

Functional Description
(View)

The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.

Protein Sequence
(Fasta)

MLLEVHRKLL ARSERVKTVD FHPTEPWLLS GLYSGKVLVW HTETGALLKS FTPTEVPVRC 60
AKFIARKNWF VCGSDDFHLR VFNYNTSERV SGFEAHPDYI RCLAVHPTQP FVLTGSDDMT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACTAGCCAAC CAATACCACC AAATGAAATC AACTTACTAA AACTACTTCA ACATCCTCAA 60
CACTATTCAA GAAACCATCA TCAGTATCAT CATCAACACA ACACTATGCT CTTAGAAGTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0968--Cytoplasmic vesicle
KW-0931--ER-Golgi transport
KW-0333--Golgi apparatus
KW-0472--Membrane
KW-0653--Protein transport
KW-1185--Reference proteome
KW-0813--Transport
KW-0853--WD repeat

Interpro

IPR006692--Coatomer_WD-assoc_reg
IPR016453--COPB2
IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04053--Coatomer_WDAD
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0030126--C:COPI vesicle coat
GO:0005829--C:cytosol
GO:0000139--C:Golgi membrane
GO:0005634--C:nucleus
GO:0005198--F:structural molecule activity
GO:0006888--P:ER to Golgi vesicle-mediated transport
GO:0006886--P:intracellular protein transport
GO:0032511--P:late endosome to vacuole transport via multivesicular body sorting pathway
GO:0006890--P:retrograde vesicle-mediated transport, Golgi to ER

KEGG

mlr:MELLADRAFT_47966

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000654	Aegilops tauschii	44.38	0.00e+00	725.00
IUUC-Aml-002154	Ailuropoda melanoleuca	53.32	0.00e+00	930.00
IUUC-Atr-003090	Amborella trichopoda	51.82	0.00e+00	883.00
IUUC-Apl-003976	Anas platyrhynchos	54.34	0.00e+00	933.00
IUUC-Aca-004301	Anolis carolinensis	54.21	0.00e+00	936.00
IUUC-Aly-005643	Arabidopsis lyrata	53.92	0.00e+00	889.00
IUUC-Ath-007630	Arabidopsis thaliana	54.02	0.00e+00	897.00
IUUC-Ago-007914	Ashbya gossypii	49.69	0.00e+00	809.00
IUUC-Acl-008237	Aspergillus clavatus	56.54	0.00e+00	970.00
IUUC-Afl-008535	Aspergillus flavus	56.82	0.00e+00	935.00
IUUC-Afu-008845	Aspergillus fumigatus	57.34	0.00e+00	966.00
IUUC-Ani-009135	Aspergillus nidulans	56.44	0.00e+00	944.00
IUUC-Ang-009654	Aspergillus niger	60.49	0.00e+00	860.00
IUUC-Aor-009939	Aspergillus oryzae	57.41	0.00e+00	989.00
IUUC-Ate-010355	Aspergillus terreus	56.16	0.00e+00	948.00
IUUC-Ame-010922	Astyanax mexicanus	47.99	0.00e+00	790.00
IUUC-Bgr-012249	Blumeria graminis	57.00	0.00e+00	956.00
IUUC-Bta-013579	Bos taurus	54.04	0.00e+00	842.00
IUUC-Bci-013866	Botrytis cinerea	58.12	0.00e+00	947.00
IUUC-Bdi-015046	Brachypodium distachyon	52.48	0.00e+00	900.00
IUUC-Bol-015466	Brassica oleracea	53.15	0.00e+00	888.00
IUUC-Bra-016617	Brassica rapa	53.04	0.00e+00	883.00
IUUC-Cel-018387	Caenorhabditis elegans	48.69	0.00e+00	843.00
IUUC-Cja-019145	Callithrix jacchus	53.32	0.00e+00	931.00
IUUC-Cfa-020564	Canis familiaris	53.96	0.00e+00	930.00
IUUC-Cpo-022201	Cavia porcellus	53.56	0.00e+00	932.00
IUUC-Cre-022938	Chlamydomonas reinhardtii	52.37	0.00e+00	848.00
IUUC-Csa-023383	Chlorocebus sabaeus	57.32	0.00e+00	716.00
IUUC-Cho-024454	Choloepus hoffmanni	50.47	0.00e+00	791.00
IUUC-Cin-025681	Ciona intestinalis	51.19	0.00e+00	855.00
IUUC-Csv-026012	Ciona savignyi	51.60	0.00e+00	849.00
IUUC-Cgl-026649	Colletotrichum gloeosporioides	52.91	0.00e+00	850.00
IUUC-Cne-026986	Cryptococcus neoformans	60.87	0.00e+00	1055.00
IUUC-Cme-027219	Cyanidioschyzon merolae	42.80	0.00e+00	748.00
IUUC-Dre-027846	Danio rerio	53.71	0.00e+00	926.00
IUUC-Dor-030462	Dipodomys ordii	51.88	0.00e+00	731.00
IUUC-Dse-031268	Dothistroma septosporum	57.21	0.00e+00	971.00
IUUC-Dme-031791	Drosophila melanogaster	50.88	0.00e+00	845.00
IUUC-Ete-033166	Echinops telfairi	51.08	4.00e-171	593.00
IUUC-Eca-034180	Equus caballus	52.76	0.00e+00	895.00
IUUC-Eeu-035086	Erinaceus europaeus	42.22	5.00e-96	343.00
IUUC-Fca-036265	Felis catus	53.32	0.00e+00	929.00
IUUC-Fal-037202	Ficedula albicollis	53.65	0.00e+00	889.00
IUUC-Fox-037711	Fusarium oxysporum	56.51	0.00e+00	887.00
IUUC-Fso-038268	Fusarium solani	56.10	0.00e+00	895.00
IUUC-Gmo-039046	Gadus morhua	53.33	0.00e+00	919.00
IUUC-Ggr-039863	Gaeumannomyces graminis	56.38	0.00e+00	918.00
IUUC-Gga-041112	Gallus gallus	53.81	0.00e+00	936.00
IUUC-Gac-041733	Gasterosteus aculeatus	52.70	0.00e+00	892.00
IUUC-Gma-044333	Glycine max	53.58	0.00e+00	905.00
IUUC-Ggo-044984	Gorilla gorilla	54.09	0.00e+00	933.00
IUUC-Hsa-046698	Homo sapiens	54.09	0.00e+00	933.00
IUUC-Hvu-047669	Hordeum vulgare	59.04	2.00e-136	476.00
IUUC-Itr-048212	Ictidomys tridecemlineatus	53.32	0.00e+00	929.00
IUUC-Kpa-049265	Komagataella pastoris	50.68	0.00e+00	877.00
IUUC-Lch-050473	Latimeria chalumnae	54.09	0.00e+00	933.00
IUUC-Lpe-050975	Leersia perrieri	53.88	0.00e+00	894.00
IUUC-Loc-052675	Lepisosteus oculatus	53.84	0.00e+00	930.00
IUUC-Lma-053218	Leptosphaeria maculans	55.01	0.00e+00	929.00
IUUC-Laf-053757	Loxodonta africana	53.95	0.00e+00	926.00
IUUC-Mcc-054859	Macaca mulatta	54.09	0.00e+00	932.00
IUUC-Meu-056174	Macropus eugenii	44.67	1.00e-82	299.00
IUUC-Mor-057264	Magnaporthe oryzae	58.07	0.00e+00	912.00
IUUC-Mpo-057538	Magnaporthe poae	56.01	0.00e+00	930.00
IUUC-Mtr-058310	Medicago truncatula	53.58	0.00e+00	910.00
IUUC-Mga-059875	Meleagris gallopavo	53.55	0.00e+00	930.00
IUUC-Mvi-060240	Microbotryum violaceum	69.94	0.00e+00	1177.00
IUUC-Mmr-061261	Microcebus murinus	53.96	0.00e+00	931.00
IUUC-Mdo-062076	Monodelphis domestica	54.21	0.00e+00	933.00
IUUC-Mmu-063324	Mus musculus	54.09	0.00e+00	934.00
IUUC-Mac-064636	Musa acuminata	52.52	0.00e+00	884.00
IUUC-Mpu-065961	Mustela putorius furo	53.32	0.00e+00	929.00
IUUC-Mlu-067059	Myotis lucifugus	53.84	0.00e+00	901.00
IUUC-Nfi-068277	Neosartorya fischeri	57.45	0.00e+00	960.00
IUUC-Ncr-068659	Neurospora crassa	56.37	0.00e+00	956.00
IUUC-Nle-069034	Nomascus leucogenys	54.09	0.00e+00	932.00
IUUC-Opr-070334	Ochotona princeps	54.40	0.00e+00	868.00
IUUC-Ont-071563	Oreochromis niloticus	53.21	0.00e+00	918.00
IUUC-Oan-073416	Ornithorhynchus anatinus	53.91	0.00e+00	890.00
IUUC-Ocu-074522	Oryctolagus cuniculus	53.96	0.00e+00	927.00
IUUC-Oba-075760	Oryza barthii	51.60	0.00e+00	862.00
IUUC-Obr-076201	Oryza brachyantha	53.47	0.00e+00	898.00
IUUC-Ogl-077450	Oryza glaberrima	52.47	0.00e+00	888.00
IUUC-Ogu-078994	Oryza glumaepatula	51.60	0.00e+00	861.00
IUUC-Oin-079856	Oryza indica	53.50	0.00e+00	894.00
IUUC-Olo-080731	Oryza longistaminata	52.11	0.00e+00	850.00
IUUC-Ome-081554	Oryza meridionalis	49.88	0.00e+00	822.00
IUUC-Oni-082324	Oryza nivara	51.60	0.00e+00	862.00
IUUC-Opu-083400	Oryza punctata	52.42	0.00e+00	885.00
IUUC-Oru-085196	Oryza rufipogon	52.62	0.00e+00	875.00
IUUC-Osa-086026	Oryza sativa	52.59	0.00e+00	891.00
IUUC-Ola-087245	Oryzias latipes	52.96	0.00e+00	917.00
IUUC-Olu-087655	Ostreococcus lucimarinus	53.11	0.00e+00	891.00
IUUC-Oga-088163	Otolemur garnettii	52.08	0.00e+00	887.00
IUUC-Oar-089842	Ovis aries	53.32	0.00e+00	931.00
IUUC-Ptr-090501	Pan troglodytes	53.44	0.00e+00	933.00
IUUC-Pan-092011	Papio anubis	54.09	0.00e+00	933.00
IUUC-Psi-093308	Pelodiscus sinensis	54.09	0.00e+00	932.00
IUUC-Pma-094695	Petromyzon marinus	50.51	0.00e+00	832.00
IUUC-Pno-094785	Phaeosphaeria nodorum	61.79	5.00e-107	379.00
IUUC-Ppa-095911	Physcomitrella patens	52.42	0.00e+00	894.00
IUUC-Pfo-096587	Poecilia formosa	53.33	0.00e+00	920.00
IUUC-Pab-097926	Pongo abelii	52.14	0.00e+00	868.00
IUUC-Pop-099634	Populus trichocarpa	53.33	0.00e+00	900.00
IUUC-Pca-100965	Procavia capensis	52.58	0.00e+00	896.00
IUUC-Ppe-101470	Prunus persica	54.07	0.00e+00	910.00
IUUC-Pva-102451	Pteropus vampyrus	51.43	0.00e+00	728.00
IUUC-Pgr-103453	Puccinia graminis	77.54	0.00e+00	1301.00
IUUC-Ptt-103868	Puccinia triticina	75.76	0.00e+00	1294.00
IUUC-Pte-104274	Pyrenophora teres	55.82	0.00e+00	954.00
IUUC-Pyt-104794	Pyrenophora triticirepentis	55.23	0.00e+00	907.00
IUUC-Rno-105979	Rattus norvegicus	46.19	0.00e+00	688.00
IUUC-Sce-106269	Saccharomyces cerevisiae	49.38	0.00e+00	810.00
IUUC-Sha-106905	Sarcophilus harrisii	54.21	0.00e+00	933.00
IUUC-Sja-107838	Schizosaccharomyces japonicus	49.87	0.00e+00	852.00
IUUC-Spo-108299	Schizosaccharomyces pombe	49.87	0.00e+00	859.00
IUUC-Smo-108695	Selaginella moellendorffii	51.30	0.00e+00	872.00
IUUC-Sit-110692	Setaria italica	53.35	0.00e+00	890.00
IUUC-Sly-111775	Solanum lycopersicum	52.92	0.00e+00	890.00
IUUC-Stu-112906	Solanum tuberosum	52.51	0.00e+00	810.00
IUUC-Sar-113472	Sorex araneus	50.89	0.00e+00	664.00
IUUC-Sbi-113886	Sorghum bicolor	53.85	0.00e+00	898.00
IUUC-Sre-115040	Sporisorium reilianum	63.78	0.00e+00	1096.00
IUUC-Ssc-115593	Sus scrofa	53.19	0.00e+00	929.00
IUUC-Tgu-117239	Taeniopygia guttata	54.09	0.00e+00	931.00
IUUC-Tru-118025	Takifugu rubripes	53.14	0.00e+00	915.00
IUUC-Tsy-118824	Tarsius syrichta	50.80	0.00e+00	672.00
IUUC-Tni-120142	Tetraodon nigroviridis	53.08	0.00e+00	910.00
IUUC-Tca-121613	Theobroma cacao	53.95	0.00e+00	909.00
IUUC-Tre-122072	Trichoderma reesei	56.88	0.00e+00	949.00
IUUC-Tvi-122546	Trichoderma virens	55.64	0.00e+00	942.00
IUUC-Tae-125385	Triticum aestivum	52.48	0.00e+00	891.00
IUUC-Tur-126283	Triticum urartu	46.22	0.00e+00	749.00
IUUC-Tme-127041	Tuber melanosporum	58.10	0.00e+00	978.00
IUUC-Tbe-127770	Tupaia belangeri	53.68	0.00e+00	768.00
IUUC-Ttr-129294	Tursiops truncatus	53.84	0.00e+00	927.00
IUUC-Uma-129351	Ustilago maydis	61.16	0.00e+00	1102.00
IUUC-Vda-129716	Verticillium dahliae	57.74	0.00e+00	984.00
IUUC-Vpa-130037	Vicugna pacos	42.60	4.00e-102	363.00
IUUC-Vvi-131689	Vitis vinifera	54.46	0.00e+00	905.00
IUUC-Xtr-132633	Xenopus tropicalis	54.21	0.00e+00	931.00
IUUC-Xma-133347	Xiphophorus maculatus	53.21	0.00e+00	919.00
IUUC-Yli-134455	Yarrowia lipolytica	50.61	0.00e+00	850.00
IUUC-Zma-135706	Zea mays	53.47	0.00e+00	904.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence