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Basic Information Integrated Annotations
Tag Content
iUUCD ID IUUC-Mmu-063652
Ensembl Protein ID ENSMUSP00000078426.8
UniProt Accession H7BX49; H7BX49_MOUSE
Genbank Protein ID ENSMUSP00000078426
Protein Name WD repeat-containing protein 90
Genbank Nucleotide ID AC159277
Gene Name Wdr90
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSMUSG00000073434.11 ENSMUST00000079461.14 ENSMUSP00000078426.8
ENSMUSG00000073434.11 ENSMUST00000176923.7 ENSMUSP00000135420.1
ENSMUSG00000073434.11 ENSMUST00000176678.1 ENSMUSP00000135506.1
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEOArrayExpressGXD
DNA & RNA Element
AREsitemicroRNATRANSFACRAID2
Protein Expression/Proteomics
GPMDB
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 3.00e-35 119.8 779 812
UBD/Beta-Prp 2.90e-83 280.6 1445 1748
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD
   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtg 33
           H ++v +l+  ++ + +++ s D+t+++WDl t 
   Q: 779  HMAPVLALSTePNrGQMATVSLDHTVRIWDLATL 812
           6667777776888899**************9876 PP
   

   UBD/Beta-Prp
   S: 13   itcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvw......dls........tgk 85
           +t++++   ++ll  gs +g + vwd+ tg ++   + +++e+  + +s +   l++gs+ + +++w      +          +++
   Q: 1445 LTSLCY-GASPLLYCGSSSGQVCVWDTGTGHCFLAWEADDGEIGVLLCSGS--RLISGSNTKRLRLWavgvvpE-LrrkgssarSSS 1527
           677777.88999*************************************99..7*************6666552.056666655777 PP
   S: 86   cvhtlk.ghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkl 171
            ++  +   +  v+s sf+   d  v+G+   ti    + +g+  + + sgh+  vn vv++p ++ +++++ D+ vr+W+l++++l
   Q: 1528 VFMERElTLDGAVVSASFDSGMDMGVVGTTAGTIWYISWTEGTSTR-LISGHRTKVNEVVFSPGESHCATCGEDGSVRVWSLASMEL 1613
           7777767789999999999977*************97888888888.99**************99********************** PP
   S: 172  lrtltgghtdsvyslsfdsng......kelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlr 252
           + +++   ++s  +l++++ +      +++v+g  dgt+++++++++ +  +++ h++  + ++fs +++ ++sg +Dg + i    
   Q: 1614 VIQFQV-LNQSCLCLAWTPPScelpeqQQVVAGYSDGTLRVFSISRTAMELKMHPHRTALTAIAFSTDGQTILSGDKDGLVAISHPC 1699
           ****98.*********99988999999********************************************************9999 PP
   S: 253  sgdllktlqlhn.ssvisvav.......lsfgdnvlvlgse.dskvniw 292
           +g + ++l+ h+   +++++        l++++ +l l+++ d++v iw
   Q: 1700 TGMTFRVLSDHRgAPISAIQStskeygdLGVEGVELWLAASgDQRVSIW 1748
           ***********9744555555334445666666655555545*****99 PP
   
Organism Mus musculus
Protein Sequence
(Fasta)
MAGGSGARET RCRQGSRPGS PGSEVPAASV TGPRAEARPA GGGGGSRRAA PDRCSGGVPS 60
AAWQHPFLNV FRHFRVDEWK RSSKEGDVAV VTDKVLKSAV YRIRGSVSAS NYIQLPRTST 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Mmu-063652|E3,WD_repeat;UBD,Beta-Prp|Mus musculus
Please wait for a moment...
Nucleotide Sequence
(Fasta)
AGACAGCGTC AGCTGAGGCG GGAAGCGCGA GCTGTAGCGC CATGGCCGGA GGTAGCGGCG 60
CGCGCGAGAC GCGCTGTCGT CAGGGCTCGC GTCCCGGGAG TCCCGGGTCC GAGGTCCCCG 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Mmu-063652|E3,WD_repeat;UBD,Beta-Prp|Mus musculus
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat
Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR007714--CFA20/WDR90/C3orf67
IPR011047--Quinoprotein_ADH-like_supfam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
IPR030466--WDR90
PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
Pfam

PF05018--DUF667
PF00400--WD40
SMART

SM00320--WD40
KEGG mmu:106618
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Aml-001801 Ailuropoda melanoleuca 68.29 0.00e+00 2396.00
IUUC-Apl-003387 Anas platyrhynchos 56.82 0.00e+00 1814.00
IUUC-Aca-005235 Anolis carolinensis 52.63 0.00e+00 1649.00
IUUC-Ame-011595 Astyanax mexicanus 46.41 0.00e+00 1651.00
IUUC-Bta-012328 Bos taurus 66.92 0.00e+00 2283.00
IUUC-Cja-019058 Callithrix jacchus 65.87 0.00e+00 1193.00
IUUC-Cfa-020934 Canis familiaris 66.43 0.00e+00 2246.00
IUUC-Cpo-022025 Cavia porcellus 69.86 0.00e+00 2478.00
IUUC-Cre-022928 Chlamydomonas reinhardtii 32.71 1.00e-61 233.00
IUUC-Csa-023022 Chlorocebus sabaeus 67.93 0.00e+00 2362.00
IUUC-Cin-025133 Ciona intestinalis 36.18 0.00e+00 1193.00
IUUC-Csv-025816 Ciona savignyi 35.51 0.00e+00 1070.00
IUUC-Dre-028823 Danio rerio 46.61 0.00e+00 1638.00
IUUC-Dno-029211 Dasypus novemcinctus 68.39 0.00e+00 930.00
IUUC-Dor-030211 Dipodomys ordii 71.01 0.00e+00 2155.00
IUUC-Ete-032363 Echinops telfairi 56.69 0.00e+00 903.00
IUUC-Eca-034296 Equus caballus 69.00 0.00e+00 2316.00
IUUC-Eeu-035226 Erinaceus europaeus 54.48 0.00e+00 827.00
IUUC-Fca-035384 Felis catus 69.49 0.00e+00 2425.00
IUUC-Fal-037660 Ficedula albicollis 54.52 0.00e+00 1791.00
IUUC-Gga-040666 Gallus gallus 57.60 0.00e+00 1367.00
IUUC-Gac-041358 Gasterosteus aculeatus 47.78 0.00e+00 1591.00
IUUC-Ggo-045121 Gorilla gorilla 68.00 0.00e+00 2348.00
IUUC-Hsa-046289 Homo sapiens 68.76 0.00e+00 2323.00
IUUC-Itr-048485 Ictidomys tridecemlineatus 72.69 0.00e+00 2440.00
IUUC-Lch-050009 Latimeria chalumnae 48.70 0.00e+00 1680.00
IUUC-Loc-052629 Lepisosteus oculatus 46.05 0.00e+00 847.00
IUUC-Mcc-055834 Macaca mulatta 64.55 0.00e+00 1255.00
IUUC-Meu-056162 Macropus eugenii 60.09 0.00e+00 813.00
IUUC-Mga-060167 Meleagris gallopavo 55.77 0.00e+00 1709.00
IUUC-Mmr-060761 Microcebus murinus 77.70 3.00e-144 504.00
IUUC-Mdo-061886 Monodelphis domestica 57.98 0.00e+00 2161.00
IUUC-Mlu-068141 Myotis lucifugus 67.25 0.00e+00 2359.00
IUUC-Nle-069133 Nomascus leucogenys 64.60 0.00e+00 1474.00
IUUC-Ont-072496 Oreochromis niloticus 47.50 0.00e+00 1685.00
IUUC-Oan-072833 Ornithorhynchus anatinus 53.93 0.00e+00 1756.00
IUUC-Ola-086564 Oryzias latipes 46.55 0.00e+00 1627.00
IUUC-Oga-088919 Otolemur garnettii 66.52 0.00e+00 2318.00
IUUC-Oar-089946 Ovis aries 64.27 0.00e+00 1165.00
IUUC-Ptr-090755 Pan troglodytes 68.61 0.00e+00 1958.00
IUUC-Pan-092054 Papio anubis 68.69 0.00e+00 2359.00
IUUC-Psi-093467 Pelodiscus sinensis 57.08 0.00e+00 2013.00
IUUC-Pma-094553 Petromyzon marinus 46.41 0.00e+00 1472.00
IUUC-Pfo-096849 Poecilia formosa 46.55 0.00e+00 1500.00
IUUC-Pab-098320 Pongo abelii 67.63 0.00e+00 2084.00
IUUC-Pca-100172 Procavia capensis 59.61 0.00e+00 1177.00
IUUC-Pva-102772 Pteropus vampyrus 66.79 0.00e+00 1286.00
IUUC-Rno-105046 Rattus norvegicus 90.17 0.00e+00 3345.00
IUUC-Sha-107094 Sarcophilus harrisii 61.02 0.00e+00 1864.00
IUUC-Ssc-116257 Sus scrofa 64.14 0.00e+00 2148.00
IUUC-Tgu-117323 Taeniopygia guttata 55.27 0.00e+00 1549.00
IUUC-Tru-118717 Takifugu rubripes 47.48 0.00e+00 1303.00
IUUC-Tni-120108 Tetraodon nigroviridis 44.98 0.00e+00 897.00
IUUC-Ttr-128378 Tursiops truncatus 77.50 0.00e+00 1015.00
IUUC-Xtr-131760 Xenopus tropicalis 49.55 0.00e+00 1701.00
Created Date 25-Jun-2017

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