iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Xtr-131859

UUCD1 version

UUC-XeT-00973

Ensembl Protein ID

ENSXETP00000003059.3

UniProt Accession

Q6P812; Q6P812_XENTR

Genbank Protein ID

AAH61419.1; CAJ82574.1

Protein Name

SEC13 homolog, nuclear pore and COPII coat complex component; SEC13-like 1 (S. cerevisiae)

Genbank Nucleotide ID

AAMC01055386; CR855621

Gene Name

sec13; MGC76017; sec13l1; TGas091g04.1-001

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSXETG00000001453.3	ENSXETT00000003059.3	ENSXETP00000003059.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.10e-29	99.6	210	242

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf......sdtllvsGsdDgtikvW 28
           H+d+v+++a+      ++ +++s+s Dg +++W
   Q: 210  HSDWVRDVAWapsiglPTSTIASCSQDGRVYIW 242
           ***********999987777************* PP

Organism

Xenopus tropicalis

Protein Sequence
(Fasta)

MVSVINTVDT SHEDMIHDAQ MDYYGTRLAT CSSDRSVKIF DVKNGGQILI ADLRGHEGPV 60
WQVAWAHPMY GNILASCSYD RKVIIWKEEN GTWEKTYEYT GHDSSVNSVC WAPHDLGLVL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CGGACACGGA AGTACGGACA CGGAAGTACG GACGGGTACT GCAGCGCACT ACACCCGGAA 60
GTGATTATTG TTGCAGCCGG AGCAAACGAA GTGCTGTACA CCCGGAAGTT CTGCTGAGCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0070971--C:endoplasmic reticulum exit site
GO:0051216--P:cartilage development
GO:0055123--P:digestive system development
GO:0007029--P:endoplasmic reticulum organization
GO:0070278--P:extracellular matrix constituent secretion
GO:0042462--P:eye photoreceptor cell development
GO:0001889--P:liver development
GO:0036372--P:opsin transport
GO:0010842--P:retina layer formation

KEGG

xtr:394564

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000671	Aegilops tauschii	53.16	2.00e-93	335.00
IUUC-Aml-001832	Ailuropoda melanoleuca	89.13	3.00e-172	597.00
IUUC-Atr-002914	Amborella trichopoda	55.30	1.00e-92	332.00
IUUC-Apl-003992	Anas platyrhynchos	92.11	3.00e-168	583.00
IUUC-Aca-005283	Anolis carolinensis	92.19	3.00e-179	620.00
IUUC-Aly-005654	Arabidopsis lyrata	55.52	4.00e-92	330.00
IUUC-Ath-006816	Arabidopsis thaliana	55.85	6.00e-92	330.00
IUUC-Ago-007827	Ashbya gossypii	49.01	8.00e-81	293.00
IUUC-Acl-008205	Aspergillus clavatus	51.83	4.00e-82	297.00
IUUC-Afl-008748	Aspergillus flavus	51.14	2.00e-84	305.00
IUUC-Afu-008791	Aspergillus fumigatus	51.83	3.00e-82	298.00
IUUC-Ani-009152	Aspergillus nidulans	50.81	1.00e-84	305.00
IUUC-Ang-009765	Aspergillus niger	51.47	4.00e-85	307.00
IUUC-Aor-009927	Aspergillus oryzae	51.00	2.00e-81	295.00
IUUC-Ate-010248	Aspergillus terreus	50.81	1.00e-84	305.00
IUUC-Ame-011478	Astyanax mexicanus	86.88	3.00e-168	583.00
IUUC-Bgr-012276	Blumeria graminis	48.71	6.00e-82	296.00
IUUC-Bta-012700	Bos taurus	89.75	4.00e-172	596.00
IUUC-Bci-013722	Botrytis cinerea	50.17	3.00e-84	304.00
IUUC-Bdi-014818	Brachypodium distachyon	53.51	4.00e-93	334.00
IUUC-Bol-015779	Brassica oleracea	56.23	5.00e-92	330.00
IUUC-Bra-016973	Brassica rapa	56.08	2.00e-92	333.00
IUUC-Cel-018479	Caenorhabditis elegans	43.31	1.00e-70	259.00
IUUC-Cja-019956	Callithrix jacchus	89.58	1.00e-155	541.00
IUUC-Cfa-020752	Canis familiaris	90.06	4.00e-173	600.00
IUUC-Cpo-021871	Cavia porcellus	88.16	2.00e-169	587.00
IUUC-Cre-022797	Chlamydomonas reinhardtii	55.48	2.00e-98	351.00
IUUC-Csa-023393	Chlorocebus sabaeus	89.75	6.00e-173	599.00
IUUC-Cho-024786	Choloepus hoffmanni	71.12	7.00e-124	436.00
IUUC-Cin-025332	Ciona intestinalis	70.03	4.00e-132	463.00
IUUC-Csv-025926	Ciona savignyi	68.40	3.00e-129	454.00
IUUC-Cgl-026413	Colletotrichum gloeosporioides	51.88	1.00e-80	292.00
IUUC-Cne-027054	Cryptococcus neoformans	50.62	4.00e-80	291.00
IUUC-Cme-027165	Cyanidioschyzon merolae	34.38	1.00e-48	187.00
IUUC-Dre-027782	Danio rerio	88.75	2.00e-171	594.00
IUUC-Dno-029628	Dasypus novemcinctus	89.72	1.00e-172	598.00
IUUC-Dor-030650	Dipodomys ordii	74.14	2.00e-135	474.00
IUUC-Dse-031206	Dothistroma septosporum	47.27	1.00e-79	289.00
IUUC-Dme-031854	Drosophila melanogaster	60.60	5.00e-104	370.00
IUUC-Ete-032618	Echinops telfairi	61.99	1.00e-106	379.00
IUUC-Eca-033268	Equus caballus	90.97	3.00e-173	600.00
IUUC-Fca-035918	Felis catus	90.37	1.00e-173	602.00
IUUC-Fal-037551	Ficedula albicollis	91.50	6.00e-157	546.00
IUUC-Fox-037763	Fusarium oxysporum	50.00	1.00e-82	299.00
IUUC-Fso-038341	Fusarium solani	49.51	1.00e-81	295.00
IUUC-Gmo-038638	Gadus morhua	87.15	2.00e-169	588.00
IUUC-Ggr-039865	Gaeumannomyces graminis	50.34	5.00e-81	293.00
IUUC-Gga-040193	Gallus gallus	91.88	2.00e-176	610.00
IUUC-Gma-044311	Glycine max	55.70	6.00e-93	333.00
IUUC-Ggo-045252	Gorilla gorilla	89.75	2.00e-173	601.00
IUUC-Hsa-046565	Homo sapiens	89.44	9.00e-173	598.00
IUUC-Hvu-047835	Hordeum vulgare	53.82	2.00e-94	338.00
IUUC-Itr-048587	Ictidomys tridecemlineatus	89.72	2.00e-171	594.00
IUUC-Kpa-049148	Komagataella pastoris	53.97	3.00e-87	314.00
IUUC-Lch-050421	Latimeria chalumnae	90.00	3.00e-174	603.00
IUUC-Lpe-051187	Leersia perrieri	52.67	1.00e-93	338.00
IUUC-Loc-052167	Lepisosteus oculatus	88.51	1.00e-170	591.00
IUUC-Lma-053250	Leptosphaeria maculans	51.63	9.00e-82	296.00
IUUC-Laf-054304	Loxodonta africana	89.41	3.00e-171	593.00
IUUC-Mcc-055519	Macaca mulatta	89.44	2.00e-172	597.00
IUUC-Meu-056439	Macropus eugenii	90.62	1.00e-174	604.00
IUUC-Mor-057241	Magnaporthe oryzae	51.03	5.00e-81	293.00
IUUC-Mpo-057373	Magnaporthe poae	44.90	5.00e-66	243.00
IUUC-Mtr-058412	Medicago truncatula	55.37	5.00e-92	330.00
IUUC-Mla-058966	Melampsora laricipopulina	48.79	4.00e-86	311.00
IUUC-Mga-060066	Meleagris gallopavo	92.11	3.00e-168	583.00
IUUC-Mvi-060290	Microbotryum violaceum	47.71	4.00e-82	300.00
IUUC-Mmr-060717	Microcebus murinus	89.13	8.00e-172	595.00
IUUC-Mdo-062496	Monodelphis domestica	91.28	1.00e-175	608.00
IUUC-Mmu-063490	Mus musculus	89.75	3.00e-173	600.00
IUUC-Mac-064519	Musa acuminata	53.47	2.00e-90	325.00
IUUC-Mpu-066601	Mustela putorius furo	90.06	4.00e-173	600.00
IUUC-Mlu-067501	Myotis lucifugus	90.03	9.00e-173	598.00
IUUC-Nfi-068360	Neosartorya fischeri	50.75	1.00e-67	249.00
IUUC-Ncr-068928	Neurospora crassa	50.50	3.00e-84	305.00
IUUC-Nle-069028	Nomascus leucogenys	89.44	3.00e-173	600.00
IUUC-Opr-070446	Ochotona princeps	88.89	2.00e-162	564.00
IUUC-Ont-071587	Oreochromis niloticus	87.81	6.00e-170	589.00
IUUC-Oan-073211	Ornithorhynchus anatinus	89.72	2.00e-174	604.00
IUUC-Ocu-074306	Oryctolagus cuniculus	87.27	3.00e-168	583.00
IUUC-Oba-075069	Oryza barthii	52.49	1.00e-92	332.00
IUUC-Obr-076667	Oryza brachyantha	52.82	3.00e-93	334.00
IUUC-Ogl-077208	Oryza glaberrima	52.49	1.00e-92	332.00
IUUC-Ogu-078513	Oryza glumaepatula	52.49	1.00e-92	332.00
IUUC-Oin-079094	Oryza indica	52.49	1.00e-92	332.00
IUUC-Olo-080473	Oryza longistaminata	52.49	1.00e-92	332.00
IUUC-Ome-081643	Oryza meridionalis	52.49	1.00e-92	332.00
IUUC-Oni-082589	Oryza nivara	52.49	1.00e-92	332.00
IUUC-Opu-083677	Oryza punctata	52.49	1.00e-92	332.00
IUUC-Oru-084537	Oryza rufipogon	52.49	1.00e-92	332.00
IUUC-Osa-085449	Oryza sativa	52.49	1.00e-92	332.00
IUUC-Ola-087226	Oryzias latipes	87.50	1.00e-170	591.00
IUUC-Olu-087893	Ostreococcus lucimarinus	52.05	5.00e-79	287.00
IUUC-Oga-088837	Otolemur garnettii	90.06	4.00e-173	600.00
IUUC-Oar-089594	Ovis aries	89.44	7.00e-172	595.00
IUUC-Ptr-091132	Pan troglodytes	90.06	1.00e-173	601.00
IUUC-Psi-093568	Pelodiscus sinensis	91.50	4.00e-169	586.00
IUUC-Pma-094172	Petromyzon marinus	73.08	1.00e-62	231.00
IUUC-Pno-094955	Phaeosphaeria nodorum	50.66	1.00e-80	292.00
IUUC-Ppa-095578	Physcomitrella patens	54.97	4.00e-92	330.00
IUUC-Pfo-096063	Poecilia formosa	88.44	9.00e-172	595.00
IUUC-Pab-098674	Pongo abelii	89.13	4.00e-172	597.00
IUUC-Pop-099402	Populus trichocarpa	55.52	5.00e-93	333.00
IUUC-Pca-100824	Procavia capensis	71.74	9.00e-131	459.00
IUUC-Ppe-101707	Prunus persica	55.37	3.00e-91	328.00
IUUC-Pva-103161	Pteropus vampyrus	86.02	4.00e-165	573.00
IUUC-Pgr-103573	Puccinia graminis	51.55	5.00e-87	313.00
IUUC-Ptt-103700	Puccinia triticina	50.96	4.00e-81	294.00
IUUC-Pte-104267	Pyrenophora teres	50.68	5.00e-77	280.00
IUUC-Pyt-104535	Pyrenophora triticirepentis	50.34	2.00e-71	261.00
IUUC-Rno-104833	Rattus norvegicus	90.06	2.00e-173	600.00
IUUC-Sce-106437	Saccharomyces cerevisiae	49.35	3.00e-74	271.00
IUUC-Sha-106611	Sarcophilus harrisii	90.62	1.00e-174	604.00
IUUC-Sja-107654	Schizosaccharomyces japonicus	48.84	2.00e-80	291.00
IUUC-Spo-108362	Schizosaccharomyces pombe	50.50	5.00e-85	307.00
IUUC-Smo-109674	Selaginella moellendorffii	55.45	4.00e-95	340.00
IUUC-Sit-110132	Setaria italica	52.65	2.00e-93	335.00
IUUC-Sly-111254	Solanum lycopersicum	54.18	3.00e-88	318.00
IUUC-Stu-112195	Solanum tuberosum	53.82	1.00e-88	319.00
IUUC-Sbi-114229	Sorghum bicolor	53.16	3.00e-93	334.00
IUUC-Sre-114898	Sporisorium reilianum	49.57	5.00e-92	330.00
IUUC-Ssc-115995	Sus scrofa	93.38	2.00e-82	297.00
IUUC-Tgu-116793	Taeniopygia guttata	91.85	2.00e-164	571.00
IUUC-Tru-117797	Takifugu rubripes	86.52	7.00e-169	585.00
IUUC-Tsy-118967	Tarsius syrichta	98.18	9.00e-27	114.00
IUUC-Tni-120366	Tetraodon nigroviridis	86.88	6.00e-168	582.00
IUUC-Tca-121068	Theobroma cacao	55.48	4.00e-91	327.00
IUUC-Tre-121899	Trichoderma reesei	49.50	2.00e-81	295.00
IUUC-Tvi-122380	Trichoderma virens	49.67	9.00e-82	296.00
IUUC-Tae-123998	Triticum aestivum	54.85	1.00e-95	342.00
IUUC-Tur-126202	Triticum urartu	54.18	2.00e-94	338.00
IUUC-Tme-127181	Tuber melanosporum	53.57	1.00e-88	319.00
IUUC-Ttr-128448	Tursiops truncatus	78.57	2.00e-145	508.00
IUUC-Uma-129661	Ustilago maydis	49.86	2.00e-92	332.00
IUUC-Vda-129666	Verticillium dahliae	52.22	1.00e-80	292.00
IUUC-Vpa-130318	Vicugna pacos	90.68	1.00e-173	601.00
IUUC-Vvi-130868	Vitis vinifera	54.85	5.00e-92	330.00
IUUC-Xma-133898	Xiphophorus maculatus	88.44	5.00e-172	596.00
IUUC-Yli-134559	Yarrowia lipolytica	52.04	5.00e-82	297.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence