iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSRNOG00000057813.1	ENSRNOT00000085424.1	ENSRNOP00000072658.1
ENSRNOG00000057813.1	ENSRNOT00000090342.1	ENSRNOP00000070902.1
ENSRNOG00000057813.1	ENSRNOT00000091528.1	ENSRNOP00000069468.1

Annotation

Protein Expression/Proteomics

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	7.00e-09	36.1	112	143

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 3    tdsvtclaf.sdtllvsGsdDgtikvWDlrtg 33
           t+ vtcl++  + ++v G   g++++ +++t+
   Q: 112  TSAVTCLQWpAEYIIVFGLAEGKVRLANTKTN 143
           78899****54377888999999998776665 PP

Organism

Rattus norvegicus

Protein Sequence
(Fasta)

MQLKHLRTLL SPQDGAAKVT CMAWSQNNAK FAVCTVDRVV LLYDEHGERR DKFSTKPADM 60
KYGRKSYMVK GMAFSPDSTK IAIGQTDNII YVYKIGEDWG DKKVICNKFI QTSAVTCLQW 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCCGATGCTT GGCGGGTTGT CCAGGTAACC GTGGGAGTTG TCTCGGTCAG CGAGCATCCG 60
AGACCGGTGT GCGTCATGCA GTTGAAGCAC CTGAGGACCC TGCTGAGCCC TCAGGTGAGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

Pfam

PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001775	Ailuropoda melanoleuca	92.73	0.00e+00	978.00
IUUC-Apl-004180	Anas platyrhynchos	78.78	0.00e+00	848.00
IUUC-Bta-012784	Bos taurus	92.53	0.00e+00	950.00
IUUC-Cfa-020359	Canis familiaris	92.16	0.00e+00	974.00
IUUC-Cho-024397	Choloepus hoffmanni	93.88	0.00e+00	647.00
IUUC-Cin-025243	Ciona intestinalis	69.67	0.00e+00	714.00
IUUC-Csv-025964	Ciona savignyi	71.68	0.00e+00	786.00
IUUC-Dno-029782	Dasypus novemcinctus	92.73	0.00e+00	976.00
IUUC-Eca-033288	Equus caballus	93.32	0.00e+00	986.00
IUUC-Fca-036387	Felis catus	92.73	0.00e+00	979.00
IUUC-Hsa-046333	Homo sapiens	90.40	0.00e+00	972.00
IUUC-Loc-052126	Lepisosteus oculatus	72.82	0.00e+00	770.00
IUUC-Laf-054242	Loxodonta africana	92.73	0.00e+00	981.00
IUUC-Mcc-055460	Macaca mulatta	85.36	0.00e+00	833.00
IUUC-Meu-056864	Macropus eugenii	90.37	0.00e+00	956.00
IUUC-Mmr-060951	Microcebus murinus	90.77	0.00e+00	951.00
IUUC-Mdo-062290	Monodelphis domestica	91.16	0.00e+00	964.00
IUUC-Mlu-067149	Myotis lucifugus	90.77	0.00e+00	957.00
IUUC-Nle-069497	Nomascus leucogenys	89.22	0.00e+00	952.00
IUUC-Opr-070642	Ochotona princeps	91.94	0.00e+00	964.00
IUUC-Ocu-074484	Oryctolagus cuniculus	92.93	0.00e+00	985.00
IUUC-Ola-086935	Oryzias latipes	67.25	0.00e+00	712.00
IUUC-Ptr-090769	Pan troglodytes	90.78	0.00e+00	967.00
IUUC-Psi-093021	Pelodiscus sinensis	83.86	0.00e+00	884.00
IUUC-Pva-102604	Pteropus vampyrus	92.34	0.00e+00	966.00
IUUC-Tgu-116577	Taeniopygia guttata	80.04	0.00e+00	874.00
IUUC-Tru-117611	Takifugu rubripes	70.33	0.00e+00	761.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence