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Basic Information Integrated Annotations
Tag Content
UUCD2 ID IUUC-Mmu-064103
UUCD1 version UUC-MuM-00628
Ensembl Protein ID ENSMUSP00000060613.7
UniProt Accession Q8BHB4; WDR3_MOUSE
Genbank Protein ID BAC34400.1; BAC34414.1; AAH63100.1
Protein Name WD repeat-containing protein 3
Genbank Nucleotide ID AK050738; AK050797; BC063100
Gene Name Wdr3
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSMUSG00000033285.15 ENSMUST00000052120.13 ENSMUSP00000060613.7
ENSMUSG00000033285.15 ENSMUST00000125059.5 ENSMUSP00000135731.1
ENSMUSG00000033285.15 ENSMUST00000197602.1 ENSMUSP00000143010.1
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEOArrayExpressGXD
DNA & RNA Element
AREsitemicroRNATRANSFACRepTar
miRNAMapRAID2
Protein-protein Interaction
IIDiRefIndexPINAHINT
Post-translational Modifications (PTMs)
dbPAFPhosphositePlusdbPTMUniProt
Protein Expression/Proteomics
GPMDB
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 3.00e-41 138.7 588 626
UBD/Beta-Prp 9.80e-97 324.8 36 274
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD
   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           gH+ +v c++  +d  l+++Gs D ++k+W l+ g++ +
   Q: 588  GHKLPVLCMDIsHDgALIATGSADRNVKIWGLDFGDCHR 626
           79999******977799*******************977 PP
   

   UBD/Beta-Prp
   S: 22   ksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklv 110
           ++++a+    + + +wd+++g ++  l+g+++evt+++ spdg  l+ g eD++i++++l +g+  +t++gh++ v+sl++++ g +l+
   Q: 36   GRYVAVPA-CEHVFIWDLRKGEKILILQGNKQEVTCLCPSPDGLHLAVGYEDGAIRIFSLLSGEGNITFNGHKAAVTSLKYDQLGGRLA 123
           55555553.577889****************************9********************************************* PP
   S: 111  sGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgs 199
           sGs+d  + +wd+ +++ l+  l+gh+++v+ + +  + nllv++++D++v++Wdl ++ + +t+ g h   v  l + s+ k+l++g+
   Q: 124  SGSKDTDVIIWDVINESGLY-RLKGHKDAVTQALFLRERNLLVTSGKDTMVKWWDLDNQHCFKTMVG-HRTEVWGLVLVSEEKRLITGA 210
           *******************9.9***************9***************************99.*********9999******** PP
   S: 200  ldgtvklwdlq...........tgecvrtlnghtdnvksvrfs......pnderlvsgssDgsi 246
            d+ ++ wd+            + + ++++ g +d++ s + +      + ++r++s+s+ gsi
   Q: 211  ADSELRAWDIDylqeiddpeepEPKKIKECPGIQDTPESEDSTleaddeKSEDRILSCSKAGSI 274
           **********999999998888777788888888777776666555555666777777777766 PP
   
Organism Mus musculus
Protein Sequence
(Fasta)
MGLTKQYLRY VASAVFGLIG SQKGNIVFVT LRGEKGRYVA VPACEHVFIW DLRKGEKILI 60
LQGNKQEVTC LCPSPDGLHL AVGYEDGAIR IFSLLSGEGN ITFNGHKAAV TSLKYDQLGG 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Mmu-064103|E3,WD_repeat;UBD,Beta-Prp|Mus musculus
Please wait for a moment...
Nucleotide Sequence
(Fasta)
AATCGGACCG GAAGTGGCGG GTCTCGTAGG CAGCGCTGTC TGCTGGAGCC TCGTGGAGAG 60
TGAGGTGAGT GTTGCTGGCT CTTTAGGGAT CGCGGGGCGC GGTTCCCCGC ACAGTGGTGT 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Mmu-064103|E3,WD_repeat;UBD,Beta-Prp|Mus musculus
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-0597--Phosphoprotein
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat
Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR011047--Quinoprotein_ADH-like_supfam
IPR007148--SSU_processome_Utp12
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
Pfam

PF04003--Utp12
PF00400--WD40
PRINTS

PR00320--GPROTEINBRPT
SMART

SM00320--WD40
Gene Ontology

GO:0031965--C:nuclear membrane
GO:0005730--C:nucleolus
GO:0005634--C:nucleus
GO:0034388--C:Pwp2p-containing subcomplex of 90S preribosome
GO:0032040--C:small-subunit processome
GO:0003723--F:RNA binding
GO:0030515--F:snoRNA binding
GO:0000462--P:maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
KEGG mmu:269470
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000784 Aegilops tauschii 37.77 2.00e-151 530.00
IUUC-Aml-001245 Ailuropoda melanoleuca 89.94 0.00e+00 1612.00
IUUC-Atr-002700 Amborella trichopoda 38.20 1.00e-168 587.00
IUUC-Apl-004164 Anas platyrhynchos 77.27 0.00e+00 1067.00
IUUC-Aca-004765 Anolis carolinensis 72.79 0.00e+00 1362.00
IUUC-Aly-006503 Arabidopsis lyrata 40.02 2.00e-177 616.00
IUUC-Ath-006848 Arabidopsis thaliana 39.51 9.00e-180 624.00
IUUC-Ago-007909 Ashbya gossypii 35.01 2.00e-147 516.00
IUUC-Acl-008238 Aspergillus clavatus 39.36 0.00e+00 633.00
IUUC-Afl-008544 Aspergillus flavus 39.39 9.00e-179 620.00
IUUC-Afu-008868 Aspergillus fumigatus 38.96 6.00e-180 624.00
IUUC-Ani-009367 Aspergillus nidulans 39.09 4.00e-175 608.00
IUUC-Ang-009732 Aspergillus niger 39.12 0.00e+00 629.00
IUUC-Aor-010140 Aspergillus oryzae 39.46 2.00e-179 623.00
IUUC-Ate-010572 Aspergillus terreus 39.02 8.00e-179 621.00
IUUC-Ame-010956 Astyanax mexicanus 72.37 0.00e+00 806.00
IUUC-Bgr-012296 Blumeria graminis 37.56 2.00e-174 606.00
IUUC-Bta-012716 Bos taurus 91.10 0.00e+00 1660.00
IUUC-Bci-013699 Botrytis cinerea 37.17 5.00e-164 572.00
IUUC-Bdi-014525 Brachypodium distachyon 37.63 4.00e-161 561.00
IUUC-Bol-015117 Brassica oleracea 39.48 5.00e-175 608.00
IUUC-Bra-016869 Brassica rapa 39.16 2.00e-175 609.00
IUUC-Cel-018570 Caenorhabditis elegans 34.13 3.00e-130 459.00
IUUC-Cja-019425 Callithrix jacchus 89.64 0.00e+00 1607.00
IUUC-Cfa-020787 Canis familiaris 89.62 0.00e+00 1620.00
IUUC-Cpo-021729 Cavia porcellus 91.47 0.00e+00 1159.00
IUUC-Cre-022678 Chlamydomonas reinhardtii 42.64 1.00e-106 380.00
IUUC-Csa-024098 Chlorocebus sabaeus 90.89 0.00e+00 1626.00
IUUC-Cho-024495 Choloepus hoffmanni 76.04 0.00e+00 903.00
IUUC-Cin-025245 Ciona intestinalis 49.23 3.00e-170 591.00
IUUC-Cgl-026708 Colletotrichum gloeosporioides 38.73 6.00e-168 585.00
IUUC-Cne-026835 Cryptococcus neoformans 45.38 6.00e-125 442.00
IUUC-Cme-027162 Cyanidioschyzon merolae 29.49 3.00e-41 164.00
IUUC-Dre-027874 Danio rerio 69.52 0.00e+00 1274.00
IUUC-Dno-028905 Dasypus novemcinctus 89.30 0.00e+00 1613.00
IUUC-Dor-030383 Dipodomys ordii 87.00 0.00e+00 806.00
IUUC-Dse-031297 Dothistroma septosporum 36.81 2.00e-165 576.00
IUUC-Dme-031956 Drosophila melanogaster 42.66 0.00e+00 676.00
IUUC-Ete-032608 Echinops telfairi 81.03 0.00e+00 894.00
IUUC-Eca-034181 Equus caballus 89.94 0.00e+00 1592.00
IUUC-Eeu-034495 Erinaceus europaeus 89.47 0.00e+00 1543.00
IUUC-Fca-035994 Felis catus 90.25 0.00e+00 1514.00
IUUC-Fal-036611 Ficedula albicollis 75.90 0.00e+00 1322.00
IUUC-Fox-037807 Fusarium oxysporum 37.62 1.00e-169 590.00
IUUC-Fso-038090 Fusarium solani 37.62 3.00e-166 579.00
IUUC-Gmo-039018 Gadus morhua 63.50 0.00e+00 693.00
IUUC-Ggr-039748 Gaeumannomyces graminis 37.84 2.00e-171 596.00
IUUC-Gga-040707 Gallus gallus 76.33 0.00e+00 1346.00
IUUC-Gac-042334 Gasterosteus aculeatus 63.54 0.00e+00 685.00
IUUC-Gma-043860 Glycine max 38.16 2.00e-169 589.00
IUUC-Ggo-045334 Gorilla gorilla 89.32 0.00e+00 1585.00
IUUC-Hsa-046996 Homo sapiens 90.89 0.00e+00 1588.00
IUUC-Hvu-047381 Hordeum vulgare 34.50 7.00e-88 318.00
IUUC-Itr-047938 Ictidomys tridecemlineatus 90.47 0.00e+00 1603.00
IUUC-Kpa-049185 Komagataella pastoris 34.73 2.00e-151 530.00
IUUC-Lch-050098 Latimeria chalumnae 66.81 0.00e+00 1130.00
IUUC-Lpe-050710 Leersia perrieri 37.16 2.00e-166 580.00
IUUC-Loc-052745 Lepisosteus oculatus 68.64 0.00e+00 1191.00
IUUC-Lma-053104 Leptosphaeria maculans 38.73 4.00e-176 613.00
IUUC-Laf-054395 Loxodonta africana 88.77 0.00e+00 1580.00
IUUC-Mcc-055077 Macaca mulatta 90.89 0.00e+00 1620.00
IUUC-Meu-056418 Macropus eugenii 79.53 0.00e+00 723.00
IUUC-Mor-057031 Magnaporthe oryzae 37.87 3.00e-156 546.00
IUUC-Mpo-057420 Magnaporthe poae 37.61 3.00e-168 585.00
IUUC-Mtr-057838 Medicago truncatula 38.23 0.00e+00 628.00
IUUC-Mla-058854 Melampsora laricipopulina 37.21 1.00e-156 547.00
IUUC-Mga-060120 Meleagris gallopavo 72.19 0.00e+00 1241.00
IUUC-Mvi-060407 Microbotryum violaceum 45.62 4.00e-137 482.00
IUUC-Mmr-060635 Microcebus murinus 89.19 0.00e+00 1590.00
IUUC-Mdo-063023 Monodelphis domestica 84.31 0.00e+00 1547.00
IUUC-Mac-065569 Musa acuminata 38.67 1.00e-170 593.00
IUUC-Mpu-066462 Mustela putorius furo 89.94 0.00e+00 1624.00
IUUC-Mlu-067894 Myotis lucifugus 89.83 0.00e+00 1627.00
IUUC-Nfi-068321 Neosartorya fischeri 39.05 6.00e-179 621.00
IUUC-Ncr-068661 Neurospora crassa 37.75 2.00e-167 583.00
IUUC-Nle-069409 Nomascus leucogenys 90.36 0.00e+00 1590.00
IUUC-Opr-070445 Ochotona princeps 86.48 0.00e+00 985.00
IUUC-Ont-072339 Oreochromis niloticus 69.16 0.00e+00 1235.00
IUUC-Oan-073688 Ornithorhynchus anatinus 75.92 0.00e+00 1349.00
IUUC-Ocu-074227 Oryctolagus cuniculus 90.57 0.00e+00 1643.00
IUUC-Oba-075635 Oryza barthii 36.53 4.00e-157 548.00
IUUC-Obr-076897 Oryza brachyantha 37.85 4.00e-169 588.00
IUUC-Ogl-077555 Oryza glaberrima 36.42 9.00e-157 547.00
IUUC-Ogu-078724 Oryza glumaepatula 36.53 5.00e-158 551.00
IUUC-Oin-080030 Oryza indica 36.53 4.00e-157 548.00
IUUC-Olo-080687 Oryza longistaminata 34.68 8.00e-146 511.00
IUUC-Ome-081867 Oryza meridionalis 36.95 3.00e-159 556.00
IUUC-Oni-082559 Oryza nivara 36.53 4.00e-157 548.00
IUUC-Opu-083332 Oryza punctata 38.12 2.00e-147 516.00
IUUC-Oru-084455 Oryza rufipogon 36.53 4.00e-157 549.00
IUUC-Osa-085793 Oryza sativa 36.53 4.00e-157 549.00
IUUC-Ola-087395 Oryzias latipes 68.25 0.00e+00 1144.00
IUUC-Olu-087768 Ostreococcus lucimarinus 37.25 5.00e-155 541.00
IUUC-Oga-088574 Otolemur garnettii 90.04 0.00e+00 1625.00
IUUC-Oar-089453 Ovis aries 89.32 0.00e+00 1647.00
IUUC-Ptr-090694 Pan troglodytes 90.68 0.00e+00 1583.00
IUUC-Pan-092420 Papio anubis 90.59 0.00e+00 1613.00
IUUC-Psi-093683 Pelodiscus sinensis 80.66 0.00e+00 1464.00
IUUC-Pma-094197 Petromyzon marinus 56.58 8.00e-72 263.00
IUUC-Pno-094783 Phaeosphaeria nodorum 38.22 8.00e-174 604.00
IUUC-Ppa-095208 Physcomitrella patens 39.57 4.00e-172 598.00
IUUC-Pfo-096299 Poecilia formosa 68.36 0.00e+00 1238.00
IUUC-Pab-098706 Pongo abelii 90.88 0.00e+00 1597.00
IUUC-Pop-099275 Populus trichocarpa 38.47 5.00e-172 598.00
IUUC-Pca-100796 Procavia capensis 75.00 0.00e+00 1201.00
IUUC-Ppe-101861 Prunus persica 40.23 1.00e-179 623.00
IUUC-Pva-103241 Pteropus vampyrus 83.77 0.00e+00 1441.00
IUUC-Pgr-103432 Puccinia graminis 36.14 8.00e-151 528.00
IUUC-Ptt-103742 Puccinia triticina 39.18 1.00e-100 361.00
IUUC-Pte-104069 Pyrenophora teres 38.09 3.00e-165 576.00
IUUC-Pyt-104650 Pyrenophora triticirepentis 37.98 5.00e-173 602.00
IUUC-Rno-105219 Rattus norvegicus 96.07 0.00e+00 1694.00
IUUC-Sce-106271 Saccharomyces cerevisiae 36.02 3.00e-158 552.00
IUUC-Sha-107550 Sarcophilus harrisii 84.40 0.00e+00 1541.00
IUUC-Sja-107664 Schizosaccharomyces japonicus 38.32 2.00e-163 570.00
IUUC-Spo-108239 Schizosaccharomyces pombe 38.36 2.00e-171 596.00
IUUC-Ssl-108626 Sclerotinia sclerotiorum 38.24 2.00e-170 592.00
IUUC-Smo-109477 Selaginella moellendorffii 38.85 2.00e-169 590.00
IUUC-Sit-110000 Setaria italica 38.44 7.00e-159 554.00
IUUC-Sly-111595 Solanum lycopersicum 38.62 4.00e-177 615.00
IUUC-Stu-112516 Solanum tuberosum 38.92 2.00e-177 616.00
IUUC-Sar-113195 Sorex araneus 80.83 0.00e+00 1282.00
IUUC-Sbi-114465 Sorghum bicolor 36.81 1.00e-165 577.00
IUUC-Sre-115006 Sporisorium reilianum 34.83 4.00e-149 522.00
IUUC-Ssc-115929 Sus scrofa 89.09 0.00e+00 1576.00
IUUC-Tgu-117282 Taeniopygia guttata 76.11 0.00e+00 1322.00
IUUC-Tru-118406 Takifugu rubripes 68.11 0.00e+00 1189.00
IUUC-Tsy-119170 Tarsius syrichta 88.36 0.00e+00 1604.00
IUUC-Tni-119721 Tetraodon nigroviridis 66.88 0.00e+00 1162.00
IUUC-Tca-121761 Theobroma cacao 39.32 0.00e+00 628.00
IUUC-Tre-121908 Trichoderma reesei 36.42 7.00e-164 571.00
IUUC-Tvi-122547 Trichoderma virens 37.27 5.00e-168 585.00
IUUC-Tae-125496 Triticum aestivum 38.53 1.00e-163 570.00
IUUC-Tur-126811 Triticum urartu 40.05 1.00e-163 570.00
IUUC-Tme-126987 Tuber melanosporum 39.04 1.00e-178 620.00
IUUC-Tbe-127315 Tupaia belangeri 91.00 0.00e+00 856.00
IUUC-Ttr-129165 Tursiops truncatus 80.72 0.00e+00 1383.00
IUUC-Uma-129651 Ustilago maydis 35.29 2.00e-150 527.00
IUUC-Vda-129973 Verticillium dahliae 38.36 1.00e-162 567.00
IUUC-Vpa-130163 Vicugna pacos 78.10 0.00e+00 684.00
IUUC-Vvi-131402 Vitis vinifera 37.29 1.00e-175 610.00
IUUC-Xtr-132296 Xenopus tropicalis 72.71 0.00e+00 1306.00
IUUC-Xma-133028 Xiphophorus maculatus 68.43 0.00e+00 1241.00
IUUC-Yli-134484 Yarrowia lipolytica 38.16 8.00e-155 541.00
IUUC-Zma-135938 Zea mays 34.96 3.00e-148 519.00
Created Date 25-Jun-2017

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