iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sbi-114680

Ensembl Protein ID

Sb03g040430.1

UniProt Accession

A0A1B6Q739; A0A1B6Q739_SORBI

Genbank Protein ID

KXG33730.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000762

Gene Name

SORBI_003G362600

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb03g040430	Sb03g040430.1	Sb03g040430.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.80e-08	33.6	924	950

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 9    laf....sdtllvsGsdDgtikvWDlr 31
           +++    + +++++G++Dgt+ +W+++
   Q: 924  VDWsptpPHDMILAGCHDGTVALWNFS 950
           78998754499**************76 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MAAAPPGAGE DIKDGVEVCV FDESADGFLR TVRAISELVD KEPEPDFPEA EVERLSSSIT 60
FLREWRHFSY EPKSVTFTSG TESTSSRDDM HSVTLPQFSS ASVPQYLAVS AHPPGSSYHK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCCGCGG CACCGCCGGG AGCCGGAGAA GATATTAAAG ACGGCGTTGA GGTGTGCGTG 60
TTCGATGAGT CAGCAGATGG GTTCTTGAGA ACTGTGCGCG CCATCTCGGA GCTCGTCGAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR017956--AT_hook_DNA-bd_motif
IPR000637--HMGI/Y_DNA-bd_CS
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00354--HMGI_Y
PS00678--WD_REPEATS_1

PRINTS

PR00929--ATHOOK

SMART

SM00384--AT_hook
SM00320--WD40

Gene Ontology

GO:0003677--F:DNA binding
GO:0006355--P:regulation of transcription, DNA-templated

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000091	Aegilops tauschii	46.72	0.00e+00	940.00
IUUC-Aml-001488	Ailuropoda melanoleuca	33.07	2.00e-13	70.50
IUUC-Apl-003185	Anas platyrhynchos	27.31	2.00e-17	83.20
IUUC-Aca-005245	Anolis carolinensis	26.47	3.00e-14	73.60
IUUC-Ath-006785	Arabidopsis thaliana	50.75	1.00e-99	357.00
IUUC-Ame-010654	Astyanax mexicanus	30.57	9.00e-14	71.60
IUUC-Bta-012551	Bos taurus	33.07	4.00e-13	69.70
IUUC-Bdi-014228	Brachypodium distachyon	48.33	0.00e+00	793.00
IUUC-Bol-015619	Brassica oleracea	44.78	1.00e-120	426.00
IUUC-Bra-017566	Brassica rapa	45.98	1.00e-119	422.00
IUUC-Cja-019727	Callithrix jacchus	33.07	4.00e-13	69.70
IUUC-Cfa-020469	Canis familiaris	33.07	3.00e-13	70.10
IUUC-Cpo-021854	Cavia porcellus	32.28	2.00e-12	67.40
IUUC-Csa-023726	Chlorocebus sabaeus	33.07	2.00e-13	70.50
IUUC-Cho-024296	Choloepus hoffmanni	27.04	1.00e-13	71.20
IUUC-Dre-028735	Danio rerio	29.22	9.00e-17	81.60
IUUC-Dno-028895	Dasypus novemcinctus	33.07	3.00e-13	70.10
IUUC-Dor-030617	Dipodomys ordii	27.07	8.00e-15	75.10
IUUC-Eca-033420	Equus caballus	32.58	2.00e-13	70.90
IUUC-Eeu-035060	Erinaceus europaeus	31.43	3.00e-06	46.60
IUUC-Fca-035603	Felis catus	33.07	3.00e-13	70.10
IUUC-Fal-037637	Ficedula albicollis	29.39	1.00e-17	84.00
IUUC-Gga-040991	Gallus gallus	27.27	2.00e-17	84.30
IUUC-Ggo-045595	Gorilla gorilla	33.07	2.00e-13	70.50
IUUC-Hsa-046196	Homo sapiens	33.07	2.00e-13	70.50
IUUC-Hvu-047758	Hordeum vulgare	50.90	0.00e+00	793.00
IUUC-Itr-048222	Ictidomys tridecemlineatus	33.07	2.00e-13	70.90
IUUC-Lch-050384	Latimeria chalumnae	28.35	1.00e-11	64.70
IUUC-Lpe-050995	Leersia perrieri	46.14	0.00e+00	632.00
IUUC-Loc-052778	Lepisosteus oculatus	27.51	6.00e-19	89.00
IUUC-Laf-054474	Loxodonta africana	33.07	4.00e-13	69.70
IUUC-Mcc-055795	Macaca mulatta	33.07	2.00e-13	70.50
IUUC-Mga-059757	Meleagris gallopavo	34.02	2.00e-11	61.20
IUUC-Mmr-061702	Microcebus murinus	33.07	3.00e-13	69.70
IUUC-Mdo-063012	Monodelphis domestica	27.60	1.00e-13	71.20
IUUC-Mmu-063858	Mus musculus	32.28	7.00e-13	68.90
IUUC-Mpu-066147	Mustela putorius furo	31.78	9.00e-08	52.00
IUUC-Mlu-067530	Myotis lucifugus	33.07	3.00e-12	66.60
IUUC-Nle-069278	Nomascus leucogenys	33.07	3.00e-13	70.10
IUUC-Opr-070222	Ochotona princeps	33.07	4.00e-13	69.70
IUUC-Ont-071367	Oreochromis niloticus	26.72	3.00e-15	76.60
IUUC-Oan-073357	Ornithorhynchus anatinus	35.77	5.00e-13	68.20
IUUC-Ocu-074887	Oryctolagus cuniculus	33.33	4.00e-13	69.70
IUUC-Obr-076376	Oryza brachyantha	43.18	0.00e+00	655.00
IUUC-Ogl-077258	Oryza glaberrima	51.34	0.00e+00	769.00
IUUC-Ogu-078002	Oryza glumaepatula	52.70	5.00e-162	563.00
IUUC-Oin-079689	Oryza indica	47.67	0.00e+00	768.00
IUUC-Olo-080486	Oryza longistaminata	43.69	3.00e-131	461.00
IUUC-Oni-082369	Oryza nivara	47.54	0.00e+00	763.00
IUUC-Opu-083230	Oryza punctata	51.83	0.00e+00	805.00
IUUC-Osa-085403	Oryza sativa	48.60	0.00e+00	672.00
IUUC-Ola-087512	Oryzias latipes	33.65	2.00e-10	58.90
IUUC-Oga-088051	Otolemur garnettii	33.86	1.00e-13	71.60
IUUC-Oar-090076	Ovis aries	33.07	4.00e-13	69.70
IUUC-Ptr-091503	Pan troglodytes	33.07	3.00e-13	70.10
IUUC-Pan-092123	Papio anubis	33.07	2.00e-13	70.50
IUUC-Psi-094020	Pelodiscus sinensis	29.56	4.00e-16	79.30
IUUC-Ppa-095644	Physcomitrella patens	39.84	2.00e-55	209.00
IUUC-Pfo-097023	Poecilia formosa	28.21	9.00e-13	68.60
IUUC-Pab-097532	Pongo abelii	33.07	2.00e-13	70.50
IUUC-Pop-099342	Populus trichocarpa	42.34	1.00e-117	416.00
IUUC-Pca-100255	Procavia capensis	33.07	2.00e-13	70.90
IUUC-Ppe-101268	Prunus persica	52.98	1.00e-105	377.00
IUUC-Pva-102403	Pteropus vampyrus	33.07	3.00e-13	69.70
IUUC-Rno-105329	Rattus norvegicus	32.28	6.00e-13	68.90
IUUC-Sha-106857	Sarcophilus harrisii	36.59	1.00e-13	71.60
IUUC-Sit-110532	Setaria italica	68.64	0.00e+00	1261.00
IUUC-Sly-110922	Solanum lycopersicum	44.04	1.00e-111	396.00
IUUC-Sar-113690	Sorex araneus	30.91	2.00e-07	50.40
IUUC-Tgu-117058	Taeniopygia guttata	33.33	8.00e-12	63.50
IUUC-Tru-118675	Takifugu rubripes	25.38	3.00e-19	89.70
IUUC-Tsy-119606	Tarsius syrichta	30.71	9.00e-09	55.10
IUUC-Tni-120125	Tetraodon nigroviridis	30.89	9.00e-10	57.00
IUUC-Tae-125532	Triticum aestivum	47.48	0.00e+00	1023.00
IUUC-Tur-126862	Triticum urartu	45.64	0.00e+00	914.00
IUUC-Tbe-127727	Tupaia belangeri	32.28	6.00e-13	68.90
IUUC-Ttr-128425	Tursiops truncatus	34.15	4.00e-13	68.90
IUUC-Vpa-130050	Vicugna pacos	33.07	2.00e-13	70.50
IUUC-Vvi-131706	Vitis vinifera	52.34	2.00e-110	393.00
IUUC-Xtr-132178	Xenopus tropicalis	26.98	3.00e-13	69.70

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence