iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Psi-093525

Ensembl Protein ID

ENSPSIP00000013002.1

UniProt Accession

K7FY92; K7FY92_PELSI

Genbank Protein ID

ENSPSIP00000013002

Protein Name

WD repeat-containing protein 35

Genbank Nucleotide ID

AGCU01192689

Gene Name

WDR35

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPSIG00000011703.1	ENSPSIT00000013065.1	ENSPSIP00000013002.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.50e-06	28.4	17	48

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 6    vtclaf.sd.tllvsGsdDgtikvWDlrtgvl 35
            +c+++  + +++++G+ Dg +kv  l t+++
   Q: 17   LRCISWnKEqGFIACGGEDGLLKVLKLETQTD 48
           69****85579**************9999876 PP

Organism

Pelodiscus sinensis

Protein Sequence
(Fasta)

MFIYLSKKIA IPGNVRLRCI SWNKEQGFIA CGGEDGLLKV LKLETQTDEA KLKGLAAPSN 60
LSMNQTLEGH SGSVQVVTWN EQYQKLTTSD QNGLIIVWML YKGAWYEEMI NNRNKSVVRS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTGGCTCATC GCTGCGGAGC CAGGCCCCCA CCGTGGGGCA AAACCCGGAA GTCGCGGCTC 60
CGCCCCGGAA GTGAAGCTGT TGGATTCCGG GGCAGGCTGA GTCCGGCGTC GGTTGCCAAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0966--Cell projection
KW-0969--Cilium
KW-0970--Cilium biogenesis/degradation
KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0206--Cytoskeleton
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR016024--ARM-type_fold
IPR011990--TPR-like_helical_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom
IPR017233--WDR35

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005930--C:axoneme
GO:0005813--C:centrosome
GO:0036064--C:ciliary basal body
GO:0005737--C:cytoplasm
GO:0030991--C:intraciliary transport particle A
GO:0060271--P:cilium assembly
GO:0035721--P:intraciliary retrograde transport

KEGG

pss:102460732

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Apl-004049	Anas platyrhynchos	88.66	0.00e+00	2207.00
IUUC-Cin-025165	Ciona intestinalis	69.67	1.00e-136	478.00
IUUC-Dno-029699	Dasypus novemcinctus	93.72	0.00e+00	793.00
IUUC-Dme-032005	Drosophila melanogaster	48.57	0.00e+00	1082.00
IUUC-Gmo-038607	Gadus morhua	77.26	0.00e+00	1919.00
IUUC-Gac-041560	Gasterosteus aculeatus	78.87	0.00e+00	1956.00
IUUC-Lch-050449	Latimeria chalumnae	86.11	0.00e+00	2130.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence