iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
ArrayExpress
DNA & RNA Element
RAID2
Protein-protein Interaction
IID
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.70e-08	33.5	251	282

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlr 31
           H+  +++l++ ++ + l+s++ D  +++W l 
   Q: 251  HARTISALDLaPEvGKLLSAAEDTFVHIWKLN 282
           9999*******999***************985 PP

Organism

Rattus norvegicus

Protein Sequence
(Fasta)

MFRRERSIPL RGSAAALSNN LSVLQLPARD LTHFGVVHGP SAQLLSAAPE GVPLAQRQLH 60
VKEGAGVSPP LITQVHWCVL PFRVLLVLTS HRGIQMYESD GSVMVYWHAL DSGDASSVQA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTCGTCTCTA TGGTGGCGGC GGATTCGGAG GGACTTGAGG ATCGCGGCGT CTGGCAAGGC 60
GCACTTGAGG GTTGGGTGTG GGTTGCAGGT GTGACCTCTG ACCTTGGCGT GGGCCTTCAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

SMART

SM00320--WD40

KEGG

rno:103692166; rno:500226

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002321	Ailuropoda melanoleuca	88.62	2.00e-177	614.00
IUUC-Apl-003720	Anas platyrhynchos	59.65	1.00e-39	154.00
IUUC-Aca-004770	Anolis carolinensis	58.98	4.00e-117	414.00
IUUC-Ame-011411	Astyanax mexicanus	55.56	3.00e-111	394.00
IUUC-Bta-013393	Bos taurus	85.33	3.00e-170	590.00
IUUC-Cja-019556	Callithrix jacchus	88.51	2.00e-137	481.00
IUUC-Cfa-020464	Canis familiaris	88.89	1.00e-176	612.00
IUUC-Cpo-022511	Cavia porcellus	86.83	3.00e-173	600.00
IUUC-Csa-023147	Chlorocebus sabaeus	89.22	1.00e-176	612.00
IUUC-Dno-030065	Dasypus novemcinctus	88.66	6.00e-176	609.00
IUUC-Eca-034322	Equus caballus	89.52	2.00e-178	617.00
IUUC-Fca-036340	Felis catus	90.12	8.00e-179	619.00
IUUC-Fal-036767	Ficedula albicollis	61.22	1.00e-99	356.00
IUUC-Gmo-038580	Gadus morhua	56.29	2.00e-112	398.00
IUUC-Gga-040894	Gallus gallus	60.60	2.00e-118	419.00
IUUC-Ggo-045105	Gorilla gorilla	87.72	3.00e-174	604.00
IUUC-Hsa-046813	Homo sapiens	88.32	4.00e-175	607.00
IUUC-Itr-048544	Ictidomys tridecemlineatus	88.02	2.00e-178	617.00
IUUC-Loc-052885	Lepisosteus oculatus	58.67	8.00e-73	266.00
IUUC-Laf-053771	Loxodonta africana	85.93	1.00e-172	598.00
IUUC-Mcc-055202	Macaca mulatta	89.22	2.00e-176	611.00
IUUC-Meu-056088	Macropus eugenii	76.35	3.00e-153	534.00
IUUC-Mga-059459	Meleagris gallopavo	66.44	8.00e-58	215.00
IUUC-Mmr-061162	Microcebus murinus	89.52	7.00e-179	619.00
IUUC-Mdo-061970	Monodelphis domestica	74.25	3.00e-152	530.00
IUUC-Mmu-063111	Mus musculus	97.31	0.00e+00	641.00
IUUC-Mpu-065776	Mustela putorius furo	86.53	2.00e-172	598.00
IUUC-Nle-069469	Nomascus leucogenys	87.36	3.00e-135	474.00
IUUC-Opr-071220	Ochotona princeps	85.03	6.00e-168	583.00
IUUC-Ont-071856	Oreochromis niloticus	56.16	1.00e-110	392.00
IUUC-Ocu-074448	Oryctolagus cuniculus	85.93	5.00e-170	590.00
IUUC-Ola-087082	Oryzias latipes	57.06	7.00e-112	396.00
IUUC-Oga-088212	Otolemur garnettii	88.62	2.00e-177	614.00
IUUC-Oar-089264	Ovis aries	82.34	7.00e-161	559.00
IUUC-Ptr-090514	Pan troglodytes	88.32	3.00e-175	607.00
IUUC-Pan-092685	Papio anubis	89.22	1.00e-176	611.00
IUUC-Psi-093871	Pelodiscus sinensis	63.64	2.00e-71	261.00
IUUC-Pma-094659	Petromyzon marinus	58.38	4.00e-105	374.00
IUUC-Pfo-096872	Poecilia formosa	55.56	2.00e-109	388.00
IUUC-Pab-098638	Pongo abelii	88.62	5.00e-175	606.00
IUUC-Pca-100980	Procavia capensis	81.00	6.00e-132	462.00
IUUC-Pva-102655	Pteropus vampyrus	86.23	4.00e-173	600.00
IUUC-Sha-107647	Sarcophilus harrisii	78.53	1.00e-152	532.00
IUUC-Sar-113046	Sorex araneus	70.89	5.00e-113	400.00
IUUC-Ssc-115370	Sus scrofa	88.92	1.00e-178	618.00
IUUC-Ttr-129206	Tursiops truncatus	88.92	2.00e-177	614.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence