iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Lch-050655

Ensembl Protein ID

ENSLACP00000017563.1

UniProt Accession

H3B6P2; H3B6P2_LATCH

Genbank Protein ID

ENSLACP00000017563

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AFYH01096821

Gene Name

WDR12

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSLACG00000015471.1	ENSLACT00000017693.1	ENSLACP00000017563.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.60e-28	97.7	258	287

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclafsd.tllvsGsdDgtikvWD 29
           gH++ v+++ +sd + ++s+s+D+ti+vWD
   Q: 258  GHNEAVSSVLWSDtDEICSASWDHTIRVWD 287
           8**********7779*************** PP

Organism

Latimeria chalumnae

Protein Sequence
(Fasta)

MAHVQARFFT ENKKYAVDDV PFSIPASSEV KDLSNVINKL LEAKSGDRKH VEFDFLVKGQ 60
FLRIALVKYM EMENISTEEV VEIEYIEKIA APQPEECMFH DDWISAVQAT EEWILTGSYD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TGCTTGATTG CAGACACGTG GTGTGTTGCA GAGAGCGGGG AGAAGGGCAC AGGTTTGCGT 60
TTTACTGTTT CAAAACTCAG TATTGACTTT ATTATTATTC CTGCAGCGTA ACAGATAATT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0690--Ribosome biogenesis
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR012972--NLE
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08154--NLE
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005730--C:nucleolus
GO:0042254--P:ribosome biogenesis

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000532	Aegilops tauschii	30.03	2.00e-39	156.00
IUUC-Aml-001997	Ailuropoda melanoleuca	78.88	3.00e-137	481.00
IUUC-Atr-002544	Amborella trichopoda	30.86	3.00e-40	159.00
IUUC-Apl-003981	Anas platyrhynchos	75.93	3.00e-125	441.00
IUUC-Aca-004370	Anolis carolinensis	76.11	9.00e-149	519.00
IUUC-Aly-006455	Arabidopsis lyrata	32.45	1.00e-41	163.00
IUUC-Ath-006669	Arabidopsis thaliana	32.65	3.00e-38	152.00
IUUC-Ago-007864	Ashbya gossypii	30.14	6.00e-30	124.00
IUUC-Acl-008177	Aspergillus clavatus	27.00	4.00e-24	105.00
IUUC-Afl-008617	Aspergillus flavus	27.27	9.00e-26	111.00
IUUC-Afu-008752	Aspergillus fumigatus	26.87	5.00e-25	108.00
IUUC-Ani-009136	Aspergillus nidulans	28.82	4.00e-27	115.00
IUUC-Ang-009701	Aspergillus niger	27.49	5.00e-24	105.00
IUUC-Aor-009884	Aspergillus oryzae	27.27	6.00e-26	112.00
IUUC-Ame-011432	Astyanax mexicanus	74.63	9.00e-145	506.00
IUUC-Bgr-012218	Blumeria graminis	27.81	8.00e-27	114.00
IUUC-Bta-012829	Bos taurus	77.91	4.00e-143	501.00
IUUC-Bci-013953	Botrytis cinerea	28.03	4.00e-29	122.00
IUUC-Bdi-014351	Brachypodium distachyon	31.70	7.00e-43	167.00
IUUC-Bol-016190	Brassica oleracea	34.48	1.00e-41	163.00
IUUC-Bra-018095	Brassica rapa	33.54	1.00e-41	163.00
IUUC-Cel-018569	Caenorhabditis elegans	28.82	4.00e-28	119.00
IUUC-Cja-019468	Callithrix jacchus	77.31	3.00e-137	481.00
IUUC-Cfa-020471	Canis familiaris	77.01	6.00e-142	497.00
IUUC-Cpo-022260	Cavia porcellus	77.31	8.00e-138	483.00
IUUC-Cre-022614	Chlamydomonas reinhardtii	29.01	1.00e-28	120.00
IUUC-Csa-023989	Chlorocebus sabaeus	76.72	4.00e-137	481.00
IUUC-Cho-024426	Choloepus hoffmanni	74.19	6.00e-99	353.00
IUUC-Cin-025789	Ciona intestinalis	37.87	2.00e-63	236.00
IUUC-Cne-027063	Cryptococcus neoformans	24.05	1.00e-15	77.40
IUUC-Dre-027907	Danio rerio	74.93	2.00e-144	504.00
IUUC-Dno-029225	Dasypus novemcinctus	77.01	2.00e-142	498.00
IUUC-Dor-031082	Dipodomys ordii	66.27	3.00e-109	388.00
IUUC-Dse-031308	Dothistroma septosporum	27.94	2.00e-28	120.00
IUUC-Dme-032189	Drosophila melanogaster	39.52	5.00e-67	248.00
IUUC-Ete-032247	Echinops telfairi	70.45	6.00e-126	443.00
IUUC-Eca-034285	Equus caballus	77.61	2.00e-142	498.00
IUUC-Eeu-035322	Erinaceus europaeus	68.96	6.00e-124	437.00
IUUC-Fca-036114	Felis catus	77.01	9.00e-142	496.00
IUUC-Fal-036891	Ficedula albicollis	77.04	4.00e-114	404.00
IUUC-Fox-037965	Fusarium oxysporum	25.63	4.00e-24	105.00
IUUC-Fso-038244	Fusarium solani	26.36	4.00e-24	105.00
IUUC-Gmo-039040	Gadus morhua	73.75	2.00e-143	501.00
IUUC-Ggr-040093	Gaeumannomyces graminis	24.44	7.00e-13	68.60
IUUC-Gga-040610	Gallus gallus	74.34	1.00e-144	506.00
IUUC-Gac-042117	Gasterosteus aculeatus	72.54	6.00e-133	467.00
IUUC-Gma-043146	Glycine max	33.62	3.00e-48	185.00
IUUC-Ggo-045179	Gorilla gorilla	77.91	8.00e-137	479.00
IUUC-Hsa-046114	Homo sapiens	77.61	4.00e-136	477.00
IUUC-Hvu-047331	Hordeum vulgare	31.06	3.00e-36	145.00
IUUC-Itr-048275	Ictidomys tridecemlineatus	76.42	2.00e-141	494.00
IUUC-Kpa-049304	Komagataella pastoris	29.64	6.00e-30	125.00
IUUC-Lpe-051675	Leersia perrieri	31.10	3.00e-40	159.00
IUUC-Loc-052868	Lepisosteus oculatus	75.52	8.00e-145	506.00
IUUC-Lma-053258	Leptosphaeria maculans	26.05	1.00e-24	108.00
IUUC-Laf-053993	Loxodonta africana	77.01	3.00e-142	497.00
IUUC-Mcc-055128	Macaca mulatta	65.07	9.00e-115	406.00
IUUC-Meu-056501	Macropus eugenii	65.78	2.00e-122	432.00
IUUC-Mor-057114	Magnaporthe oryzae	25.21	4.00e-17	82.40
IUUC-Mtr-058367	Medicago truncatula	33.71	3.00e-42	166.00
IUUC-Mla-059107	Melampsora laricipopulina	25.73	3.00e-25	109.00
IUUC-Mga-059745	Meleagris gallopavo	72.86	6.00e-139	486.00
IUUC-Mvi-060362	Microbotryum violaceum	25.68	3.00e-17	83.20
IUUC-Mdo-062257	Monodelphis domestica	74.04	7.00e-145	506.00
IUUC-Mmu-063546	Mus musculus	76.42	1.00e-141	496.00
IUUC-Mac-065540	Musa acuminata	29.86	8.00e-39	154.00
IUUC-Mpu-066284	Mustela putorius furo	77.61	6.00e-143	500.00
IUUC-Mlu-067241	Myotis lucifugus	77.91	1.00e-142	499.00
IUUC-Nfi-068260	Neosartorya fischeri	26.59	3.00e-25	109.00
IUUC-Ncr-068719	Neurospora crassa	26.70	4.00e-21	95.90
IUUC-Nle-068981	Nomascus leucogenys	77.01	3.00e-136	478.00
IUUC-Opr-071218	Ochotona princeps	75.22	1.00e-142	499.00
IUUC-Ont-071646	Oreochromis niloticus	72.27	8.00e-142	496.00
IUUC-Oan-073453	Ornithorhynchus anatinus	77.29	1.00e-153	536.00
IUUC-Ocu-074008	Oryctolagus cuniculus	78.21	1.00e-143	502.00
IUUC-Oba-075712	Oryza barthii	29.68	9.00e-32	130.00
IUUC-Obr-076721	Oryza brachyantha	30.72	9.00e-40	157.00
IUUC-Ogl-077229	Oryza glaberrima	31.10	1.00e-40	160.00
IUUC-Ogu-078977	Oryza glumaepatula	29.97	8.00e-33	134.00
IUUC-Oin-079683	Oryza indica	31.69	6.00e-42	164.00
IUUC-Olo-080291	Oryza longistaminata	29.47	5.00e-29	121.00
IUUC-Ome-081834	Oryza meridionalis	31.69	1.00e-42	167.00
IUUC-Oni-082507	Oryza nivara	30.03	7.00e-38	151.00
IUUC-Opu-083396	Oryza punctata	30.52	3.00e-40	159.00
IUUC-Oru-085220	Oryza rufipogon	30.32	2.00e-37	149.00
IUUC-Osa-085767	Oryza sativa	31.69	6.00e-42	164.00
IUUC-Ola-087420	Oryzias latipes	71.68	1.00e-140	492.00
IUUC-Olu-087740	Ostreococcus lucimarinus	26.38	5.00e-22	98.60
IUUC-Oga-088264	Otolemur garnettii	75.52	6.00e-140	490.00
IUUC-Oar-089335	Ovis aries	77.31	1.00e-141	496.00
IUUC-Ptr-091320	Pan troglodytes	77.61	4.00e-136	477.00
IUUC-Pan-092833	Papio anubis	76.12	1.00e-135	476.00
IUUC-Psi-093504	Pelodiscus sinensis	76.70	5.00e-141	493.00
IUUC-Pma-094189	Petromyzon marinus	66.27	1.00e-128	452.00
IUUC-Pno-094929	Phaeosphaeria nodorum	28.01	2.00e-28	119.00
IUUC-Ppa-095429	Physcomitrella patens	33.43	4.00e-45	175.00
IUUC-Pfo-096337	Poecilia formosa	70.80	7.00e-140	489.00
IUUC-Pab-097571	Pongo abelii	77.31	7.00e-136	476.00
IUUC-Pop-099977	Populus trichocarpa	34.30	4.00e-49	188.00
IUUC-Pca-100394	Procavia capensis	72.00	2.00e-124	439.00
IUUC-Ppe-101848	Prunus persica	34.01	2.00e-45	176.00
IUUC-Pva-102921	Pteropus vampyrus	75.20	8.00e-97	347.00
IUUC-Pgr-103637	Puccinia graminis	25.20	8.00e-26	111.00
IUUC-Ptt-103781	Puccinia triticina	26.37	9.00e-26	111.00
IUUC-Pte-104135	Pyrenophora teres	27.94	4.00e-27	117.00
IUUC-Pyt-104609	Pyrenophora triticirepentis	27.67	8.00e-26	111.00
IUUC-Rno-105114	Rattus norvegicus	76.72	5.00e-142	497.00
IUUC-Sce-106401	Saccharomyces cerevisiae	29.11	2.00e-29	123.00
IUUC-Sha-107122	Sarcophilus harrisii	73.31	8.00e-141	493.00
IUUC-Sja-107766	Schizosaccharomyces japonicus	32.66	4.00e-38	152.00
IUUC-Spo-108134	Schizosaccharomyces pombe	30.46	5.00e-28	118.00
IUUC-Ssl-108398	Sclerotinia sclerotiorum	28.16	3.00e-30	125.00
IUUC-Smo-108720	Selaginella moellendorffii	30.70	2.00e-35	143.00
IUUC-Sit-110311	Setaria italica	32.28	6.00e-40	158.00
IUUC-Sly-111178	Solanum lycopersicum	34.39	2.00e-48	186.00
IUUC-Stu-112778	Solanum tuberosum	35.16	7.00e-48	184.00
IUUC-Sar-113596	Sorex araneus	59.10	3.00e-94	338.00
IUUC-Sbi-114193	Sorghum bicolor	31.19	2.00e-37	149.00
IUUC-Sre-115002	Sporisorium reilianum	28.45	1.00e-15	78.20
IUUC-Ssc-116066	Sus scrofa	77.31	3.00e-142	498.00
IUUC-Tgu-117048	Taeniopygia guttata	74.92	3.00e-123	434.00
IUUC-Tsy-119573	Tarsius syrichta	55.91	3.00e-93	334.00
IUUC-Tni-119820	Tetraodon nigroviridis	71.98	1.00e-140	493.00
IUUC-Tca-121605	Theobroma cacao	33.91	3.00e-46	179.00
IUUC-Tre-121947	Trichoderma reesei	27.46	7.00e-25	108.00
IUUC-Tvi-122481	Trichoderma virens	28.06	1.00e-26	114.00
IUUC-Tae-125861	Triticum aestivum	30.59	1.00e-40	160.00
IUUC-Tur-126586	Triticum urartu	31.06	4.00e-38	151.00
IUUC-Tme-126900	Tuber melanosporum	31.25	2.00e-38	153.00
IUUC-Tbe-127736	Tupaia belangeri	64.76	3.00e-112	398.00
IUUC-Ttr-129041	Tursiops truncatus	64.48	8.00e-117	413.00
IUUC-Uma-129628	Ustilago maydis	27.83	4.00e-11	62.80
IUUC-Vpa-130260	Vicugna pacos	78.51	7.00e-144	503.00
IUUC-Vvi-131009	Vitis vinifera	33.91	7.00e-45	174.00
IUUC-Xtr-132083	Xenopus tropicalis	73.08	2.00e-141	495.00
IUUC-Xma-133094	Xiphophorus maculatus	69.03	2.00e-136	479.00
IUUC-Zma-135509	Zea mays	30.41	3.00e-40	159.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence