• HOME
  • BROWSE
  • SEARCH
  • LINK
  • DOWNLOAD
  • USER GUIDE
  • Protein
  • Gene
  • Annotation
  • Classification
  • Domain Profile
  • Function
  • Protein Sequence
  • Nucleotide Sequence
  • Keyword
  • GO
  • Orthology
  • TOP

Tag Content
iUUCD ID IUUC-Lch-050483
Ensembl Protein ID ENSLACP00000013785.1
UniProt Accession H3AVW4; H3AVW4_LATCH
Genbank Protein ID ENSLACP00000013785
Protein Name Uncharacterized protein
Genbank Nucleotide ID AFYH01013857
Gene Name KDM5B
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSLACG00000012136.2 ENSLACT00000013882.1 ENSLACP00000013785.1
ENSLACG00000012136.2 ENSLACT00000025315.1 ENSLACP00000023149.1
Status Unreviewed
Classification
Family E-Value Score Start End
E3 activity/RING/PHD 1.80e-20 73.1 433 479
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 activity/RING/PHD
   S: 3    vClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCr 52
            ClvCg+g +++  l+ C+ C++ +H  Cl ++   ++p+ + w CpkC 
   Q: 433  TCLVCGSGNDED-RLLLCDGCDDSYHIFCLIPP-LHDVPKGD-WRCPKCL 479
           5********988.6*******************.*******7.******5 PP
   
Organism Latimeria chalumnae
Protein Sequence
(Fasta)
MAAARGELVL EDGRNSRAVL CQRCGSKVLS AGSALLATKQ LFLPSMKKSS ALSSGGSGVD 60
GEELQEHWLV DDMFTFENVG FTKDVGNIKY LICADCEVGP IGWHCLEDKK SFYVALDRVK 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Lch-050483|E3,PHD|Latimeria chalumnae
Please wait for a moment...
Nucleotide Sequence
(Fasta)
ATGGCGGCGG CCAGAGGAGA GCTGGTGCTG GAGGACGGCA GGAACAGTCG GGCGGTGTTG 60
TGTCAGCGCT GCGGTTCCAA GGTGCTGTCA GCTGGCTCCG CGCTTCTTGC TACCAAACAG 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Lch-050483|E3,PHD|Latimeria chalumnae
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger
Interpro

IPR001606--ARID_dom
IPR003347--JmjC_dom
IPR003349--JmjN
IPR013637--Lys_sp_deMease-like_dom
IPR007515--Mss4
IPR011057--Mss4-like
IPR011323--Mss4/transl-control_tumor
IPR019786--Zinc_finger_PHD-type_CS
IPR004198--Znf_C5HC2
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD
PROSITE

PS51011--ARID
PS51184--JMJC
PS51183--JMJN
PS51796--MSS4
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2
Pfam

PF01388--ARID
PF02373--JmjC
PF02375--JmjN
PF04421--Mss4
PF00628--PHD
PF08429--PLU-1
PF02928--zf-C5HC2
SMART

SM00501--BRIGHT
SM00558--JmjC
SM00545--JmjN
SM00249--PHD
Gene Ontology

GO:0005634--C:nucleus
GO:0003677--F:DNA binding
GO:0005085--F:guanyl-nucleotide exchange factor activity
GO:0016706--F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors
GO:0008270--F:zinc ion binding
GO:0007264--P:small GTPase mediated signal transduction
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Aml-001963 Ailuropoda melanoleuca 66.09 0.00e+00 1930.00
IUUC-Apl-003770 Anas platyrhynchos 70.20 0.00e+00 1814.00
IUUC-Aca-004867 Anolis carolinensis 64.22 0.00e+00 1961.00
IUUC-Ame-010620 Astyanax mexicanus 58.29 0.00e+00 1756.00
IUUC-Bta-012733 Bos taurus 67.28 0.00e+00 1802.00
IUUC-Cja-019050 Callithrix jacchus 66.50 0.00e+00 2015.00
IUUC-Cfa-021015 Canis familiaris 66.33 0.00e+00 1929.00
IUUC-Cpo-022340 Cavia porcellus 65.18 0.00e+00 1902.00
IUUC-Csa-023441 Chlorocebus sabaeus 67.87 0.00e+00 1910.00
IUUC-Cho-024823 Choloepus hoffmanni 75.20 0.00e+00 1337.00
IUUC-Dre-027707 Danio rerio 56.60 0.00e+00 1638.00
IUUC-Dno-028978 Dasypus novemcinctus 68.05 0.00e+00 1915.00
IUUC-Dor-030854 Dipodomys ordii 78.62 0.00e+00 932.00
IUUC-Ete-032760 Echinops telfairi 66.15 0.00e+00 1328.00
IUUC-Eca-034370 Equus caballus 67.27 0.00e+00 1785.00
IUUC-Eeu-035012 Erinaceus europaeus 57.33 0.00e+00 1352.00
IUUC-Fca-035494 Felis catus 66.11 0.00e+00 1919.00
IUUC-Fal-037631 Ficedula albicollis 66.18 0.00e+00 1838.00
IUUC-Gmo-039522 Gadus morhua 54.18 0.00e+00 1536.00
IUUC-Gga-040802 Gallus gallus 67.75 0.00e+00 1930.00
IUUC-Gac-041461 Gasterosteus aculeatus 57.51 0.00e+00 1698.00
IUUC-Ggo-044856 Gorilla gorilla 54.09 0.00e+00 1347.00
IUUC-Hsa-045888 Homo sapiens 66.11 0.00e+00 1910.00
IUUC-Itr-048297 Ictidomys tridecemlineatus 68.03 0.00e+00 1895.00
IUUC-Loc-052550 Lepisosteus oculatus 66.31 0.00e+00 1936.00
IUUC-Laf-053761 Loxodonta africana 66.22 0.00e+00 1806.00
IUUC-Mcc-055505 Macaca mulatta 66.18 0.00e+00 1914.00
IUUC-Meu-056467 Macropus eugenii 75.17 0.00e+00 920.00
IUUC-Mga-059358 Meleagris gallopavo 66.67 0.00e+00 1843.00
IUUC-Mmr-060863 Microcebus murinus 67.69 0.00e+00 1885.00
IUUC-Mdo-061957 Monodelphis domestica 66.77 0.00e+00 2048.00
IUUC-Mmu-063944 Mus musculus 66.36 0.00e+00 1961.00
IUUC-Mpu-066719 Mustela putorius furo 66.27 0.00e+00 1991.00
IUUC-Mlu-067366 Myotis lucifugus 62.96 0.00e+00 1865.00
IUUC-Nle-069256 Nomascus leucogenys 65.20 0.00e+00 1872.00
IUUC-Opr-071002 Ochotona princeps 47.27 0.00e+00 1193.00
IUUC-Ont-071701 Oreochromis niloticus 58.69 0.00e+00 1737.00
IUUC-Oan-073568 Ornithorhynchus anatinus 69.16 0.00e+00 1937.00
IUUC-Ocu-073961 Oryctolagus cuniculus 66.25 0.00e+00 1970.00
IUUC-Ogl-077213 Oryza glaberrima 41.77 9.00e-14 69.70
IUUC-Oin-079273 Oryza indica 41.77 1.00e-13 69.30
IUUC-Olo-080985 Oryza longistaminata 43.06 8.00e-14 70.10
IUUC-Osa-085832 Oryza sativa 41.77 8.00e-14 70.10
IUUC-Ola-086448 Oryzias latipes 55.89 0.00e+00 1620.00
IUUC-Oga-088501 Otolemur garnettii 62.89 0.00e+00 1506.00
IUUC-Oar-090162 Ovis aries 67.07 0.00e+00 1791.00
IUUC-Ptr-090816 Pan troglodytes 66.25 0.00e+00 1916.00
IUUC-Pan-092764 Papio anubis 67.87 0.00e+00 1911.00
IUUC-Psi-093918 Pelodiscus sinensis 62.99 0.00e+00 1712.00
IUUC-Ppa-095839 Physcomitrella patens 57.89 2.00e-16 82.80
IUUC-Pfo-096777 Poecilia formosa 57.82 0.00e+00 1712.00
IUUC-Pab-097854 Pongo abelii 67.86 0.00e+00 1627.00
IUUC-Pca-100241 Procavia capensis 62.48 0.00e+00 1222.00
IUUC-Pva-103035 Pteropus vampyrus 66.20 0.00e+00 1415.00
IUUC-Rno-105574 Rattus norvegicus 65.65 0.00e+00 1915.00
IUUC-Sar-113477 Sorex araneus 66.14 0.00e+00 1772.00
IUUC-Sbi-114173 Sorghum bicolor 60.47 1.00e-11 63.50
IUUC-Ssc-116132 Sus scrofa 70.20 0.00e+00 1835.00
IUUC-Tgu-117452 Taeniopygia guttata 64.69 0.00e+00 1907.00
IUUC-Tru-117561 Takifugu rubripes 55.82 0.00e+00 1618.00
IUUC-Tsy-119271 Tarsius syrichta 70.57 0.00e+00 1415.00
IUUC-Tni-119650 Tetraodon nigroviridis 57.74 0.00e+00 1695.00
IUUC-Tbe-127890 Tupaia belangeri 56.90 0.00e+00 981.00
IUUC-Ttr-128546 Tursiops truncatus 66.39 0.00e+00 1505.00
IUUC-Vpa-130432 Vicugna pacos 65.53 0.00e+00 1138.00
IUUC-Vvi-131071 Vitis vinifera 46.77 1.00e-82 301.00
IUUC-Xtr-132008 Xenopus tropicalis 61.85 0.00e+00 1826.00
Created Date 25-Jun-2017

https://dev.news.makassarkota.go.id/public/pgsoft-demo/ https://jdih.sumbawabaratkab.go.id/lato/pg-soft-demo/ https://dev.news.makassarkota.go.id/public/slot-gacor/ http://pbb.tanahbumbukab.go.id/-/slot-gacor/ slot gacor https://siakad.unipra.ac.id/sass/slot-gacor-x500/ http://kpm.dinus.ac.id/assets/images/berita/slot/
Copyright © 2004-2017.The CUCKOO Workgroup. All Rights Reserved