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Basic Information Integrated Annotations
Tag Content
iUUCD ID IUUC-Rno-105379
Ensembl Protein ID ENSRNOP00000075039.1
UniProt Accession A0A0G2K9L2; A0A0G2K9L2_RAT
Genbank Protein ID ENSRNOP00000075039
Protein Name Target of myb1-like 2 membrane-trafficking protein
Genbank Nucleotide ID AC116201
Gene Name Tom1l2
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSRNOG00000003590.7 ENSRNOT00000083093.1 ENSRNOP00000075039.1
ENSRNOG00000003590.7 ENSRNOT00000067866.1 ENSRNOP00000061635.1
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEOArrayExpress
DNA & RNA Element
RAID2
Post-translational Modifications (PTMs)
dbPAF
Protein Expression/Proteomics
GPMDB
Status Unreviewed
Classification
Family E-Value Score Start End
UBD/Alpha-Helix/GAT 3.00e-27 95.6 216 306
UBD/Alpha-Helix/VHS 5.40e-47 159.5 20 152
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   UBD/Alpha-Helix/GAT
   S: 36   dkaekikkliseleevksnvkllnemlselspegeepednellqelyetckaarpkllklieeeedndellaellkanDelnqvlnkyk 124
           +++e+i +l+sel+ v++n+k+++eml+e++p++e+++d ellqel++tc+a+++++++li++ ++n+e+++ell++nD+ln+v+++y+
   Q: 216  ANSEQIARLRSELDIVRGNTKVMSEMLTEMVPGQEDSSDLELLQELNRTCRAMQHRIVELISR-VSNEEVTEELLHVNDDLNNVFLRYE 303
           689************************************************************.************************* PP
   S: 125  qlk 127
           +++
   Q: 304  RFE 306
           997 PP
   

   UBD/Alpha-Helix/VHS
   S: 1    atselvtsedwelileicdliqetkegakdalralrkri.nnknphvalraLtlLdscvsnCgkkfhvevaskdllee..lrell.kne 85
           at+ +++sedw+l++eicd+i+et+eg+kda+ral+kr+ +n+n  ++++aLt+L++cv+nCg++fh++va++d++++  +r +  kn+
   Q: 20   ATDGSLQSEDWTLNMEICDIINETEEGPKDAIRALKKRLsGNRNYREVMLALTVLETCVKNCGHRFHLLVANRDFIDSvlVRIISpKNN 108
           68999**********************************99*************************************877888899** PP
   S: 86   nepkvieKlkalivsWadelknepalslivaliktlkeeGlefp 129
           +++ v +K++ali++Wad+++++p+l+++v+++++lk++G+efp
   Q: 109  PPTIVQDKVLALIQAWADAFRSSPDLTGVVHIYEELKRKGIEFP 152
           *******************************************8 PP
   
Organism Rattus norvegicus
Protein Sequence
(Fasta)
MEFLLGNPFS TPVGQCLEKA TDGSLQSEDW TLNMEICDII NETEEGPKDA IRALKKRLSG 60
NRNYREVMLA LTVLETCVKN CGHRFHLLVA NRDFIDSVLV RIISPKNNPP TIVQDKVLAL 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Rno-105379|UBD,GAT;UBD,VHS|Rattus norvegicus
Please wait for a moment...
Nucleotide Sequence
(Fasta)
GCGGGGGCAA GTGTCAGTCA GGGCAGAGCG CAGCGCGGGC AGCGGAGACC CGTGGCACAC 60
AGGCGTCCGG GCTGGAACGA GGCCCGCCGA GATGGAGTTC CTGCTGGGGA ATCCGTTCAG 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Rno-105379|UBD,GAT;UBD,VHS|Rattus norvegicus
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0653--Protein transport
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0813--Transport
Interpro

IPR008942--ENTH_VHS
IPR004152--GAT_dom
IPR014645--TOM1
IPR027429--TOM1L2
IPR002014--VHS_dom
PROSITE

PS50909--GAT
PS50179--VHS
Pfam

PF03127--GAT
PF00790--VHS
SMART

SM00288--VHS
Gene Ontology

GO:0070062--C:extracellular exosome
GO:0005622--C:intracellular
GO:0006886--P:intracellular protein transport
GO:0045839--P:negative regulation of mitotic nuclear division
GO:0007165--P:signal transduction
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000135 Aegilops tauschii 29.77 2.00e-26 114.00
IUUC-Aml-002171 Ailuropoda melanoleuca 89.16 0.00e+00 826.00
IUUC-Atr-003138 Amborella trichopoda 31.85 5.00e-28 119.00
IUUC-Apl-003931 Anas platyrhynchos 83.78 0.00e+00 773.00
IUUC-Aca-004547 Anolis carolinensis 65.30 5.00e-161 560.00
IUUC-Aly-005656 Arabidopsis lyrata 33.55 8.00e-37 148.00
IUUC-Ath-007359 Arabidopsis thaliana 32.14 3.00e-36 147.00
IUUC-Aor-010219 Aspergillus oryzae 24.42 4.00e-20 92.80
IUUC-Ame-011059 Astyanax mexicanus 65.75 0.00e+00 652.00
IUUC-Bta-012995 Bos taurus 81.50 0.00e+00 772.00
IUUC-Bdi-015001 Brachypodium distachyon 32.41 2.00e-32 134.00
IUUC-Bol-015832 Brassica oleracea 33.33 1.00e-36 147.00
IUUC-Bra-017805 Brassica rapa 33.23 7.00e-37 148.00
IUUC-Cel-018158 Caenorhabditis elegans 49.41 2.00e-88 319.00
IUUC-Cja-019153 Callithrix jacchus 90.00 0.00e+00 816.00
IUUC-Cfa-020935 Canis familiaris 92.83 0.00e+00 897.00
IUUC-Cpo-021763 Cavia porcellus 86.17 0.00e+00 828.00
IUUC-Cre-022771 Chlamydomonas reinhardtii 34.36 5.00e-16 77.80
IUUC-Csa-023899 Chlorocebus sabaeus 92.72 0.00e+00 908.00
IUUC-Cin-025779 Ciona intestinalis 43.87 2.00e-71 262.00
IUUC-Dre-028784 Danio rerio 66.48 0.00e+00 701.00
IUUC-Dno-029588 Dasypus novemcinctus 92.80 0.00e+00 840.00
IUUC-Dor-030371 Dipodomys ordii 73.11 0.00e+00 632.00
IUUC-Dme-032144 Drosophila melanogaster 42.32 3.00e-100 358.00
IUUC-Eca-033664 Equus caballus 89.82 0.00e+00 819.00
IUUC-Eeu-035062 Erinaceus europaeus 68.56 0.00e+00 647.00
IUUC-Fca-036096 Felis catus 89.43 0.00e+00 865.00
IUUC-Fal-036951 Ficedula albicollis 87.19 0.00e+00 829.00
IUUC-Gmo-038942 Gadus morhua 60.73 6.00e-170 590.00
IUUC-Gga-040378 Gallus gallus 85.61 0.00e+00 791.00
IUUC-Gac-042242 Gasterosteus aculeatus 68.20 0.00e+00 705.00
IUUC-Gma-043428 Glycine max 32.12 2.00e-34 140.00
IUUC-Ggo-045180 Gorilla gorilla 91.67 0.00e+00 870.00
IUUC-Hsa-045697 Homo sapiens 91.67 0.00e+00 870.00
IUUC-Hvu-047560 Hordeum vulgare 30.24 9.00e-31 127.00
IUUC-Itr-048308 Ictidomys tridecemlineatus 82.87 0.00e+00 806.00
IUUC-Lch-049647 Latimeria chalumnae 77.97 0.00e+00 738.00
IUUC-Lpe-051451 Leersia perrieri 33.22 6.00e-32 132.00
IUUC-Loc-052081 Lepisosteus oculatus 76.70 0.00e+00 795.00
IUUC-Laf-053664 Loxodonta africana 76.98 0.00e+00 726.00
IUUC-Mcc-055637 Macaca mulatta 92.91 0.00e+00 910.00
IUUC-Meu-056014 Macropus eugenii 73.11 0.00e+00 687.00
IUUC-Mtr-058035 Medicago truncatula 29.97 2.00e-32 134.00
IUUC-Mga-060056 Meleagris gallopavo 78.52 0.00e+00 671.00
IUUC-Mvi-060415 Microbotryum violaceum 27.04 2.00e-15 77.80
IUUC-Mmr-060929 Microcebus murinus 86.36 0.00e+00 796.00
IUUC-Mdo-061814 Monodelphis domestica 83.52 0.00e+00 852.00
IUUC-Mmu-063996 Mus musculus 94.32 0.00e+00 912.00
IUUC-Mpu-065820 Mustela putorius furo 87.93 0.00e+00 813.00
IUUC-Nle-069131 Nomascus leucogenys 90.91 0.00e+00 797.00
IUUC-Opr-070780 Ochotona princeps 80.94 0.00e+00 705.00
IUUC-Ont-072357 Oreochromis niloticus 71.97 0.00e+00 708.00
IUUC-Oan-072790 Ornithorhynchus anatinus 82.00 7.00e-170 589.00
IUUC-Ocu-074458 Oryctolagus cuniculus 90.81 0.00e+00 763.00
IUUC-Oba-075564 Oryza barthii 31.25 4.00e-33 135.00
IUUC-Obr-076278 Oryza brachyantha 32.08 3.00e-34 140.00
IUUC-Ogl-077758 Oryza glaberrima 31.25 4.00e-33 136.00
IUUC-Ogu-078839 Oryza glumaepatula 31.25 3.00e-33 136.00
IUUC-Oin-079919 Oryza indica 31.25 4.00e-33 135.00
IUUC-Olo-080861 Oryza longistaminata 29.18 6.00e-32 132.00
IUUC-Ome-081795 Oryza meridionalis 32.54 1.00e-32 135.00
IUUC-Oni-082876 Oryza nivara 30.36 1.00e-32 135.00
IUUC-Opu-083285 Oryza punctata 34.14 5.00e-34 139.00
IUUC-Oru-084640 Oryza rufipogon 31.25 4.00e-33 136.00
IUUC-Osa-085855 Oryza sativa 31.25 4.00e-33 135.00
IUUC-Ola-087001 Oryzias latipes 66.79 0.00e+00 641.00
IUUC-Olu-087840 Ostreococcus lucimarinus 34.11 1.00e-15 77.80
IUUC-Oga-088302 Otolemur garnettii 89.39 0.00e+00 835.00
IUUC-Ptr-091081 Pan troglodytes 91.29 0.00e+00 862.00
IUUC-Pan-092566 Papio anubis 92.91 0.00e+00 910.00
IUUC-Psi-093744 Pelodiscus sinensis 85.23 0.00e+00 786.00
IUUC-Pma-094514 Petromyzon marinus 64.36 2.00e-125 442.00
IUUC-Ppa-095533 Physcomitrella patens 32.30 9.00e-33 135.00
IUUC-Pfo-096489 Poecilia formosa 68.08 0.00e+00 670.00
IUUC-Pab-098769 Pongo abelii 93.06 0.00e+00 875.00
IUUC-Pop-099695 Populus trichocarpa 30.28 2.00e-32 134.00
IUUC-Ppe-101305 Prunus persica 31.91 2.00e-36 147.00
IUUC-Pva-102889 Pteropus vampyrus 78.22 0.00e+00 707.00
IUUC-Sce-106195 Saccharomyces cerevisiae 25.91 1.00e-17 84.70
IUUC-Smo-109609 Selaginella moellendorffii 35.06 2.00e-19 90.10
IUUC-Sit-109878 Setaria italica 31.51 4.00e-33 136.00
IUUC-Sly-111100 Solanum lycopersicum 32.90 2.00e-35 144.00
IUUC-Stu-112728 Solanum tuberosum 31.50 5.00e-13 68.60
IUUC-Sbi-114813 Sorghum bicolor 33.23 3.00e-35 143.00
IUUC-Tgu-116705 Taeniopygia guttata 84.93 0.00e+00 754.00
IUUC-Tru-117717 Takifugu rubripes 67.34 0.00e+00 660.00
IUUC-Tsy-119063 Tarsius syrichta 80.04 0.00e+00 646.00
IUUC-Tni-120694 Tetraodon nigroviridis 56.67 1.00e-141 496.00
IUUC-Tca-121503 Theobroma cacao 32.89 7.00e-34 138.00
IUUC-Tae-124026 Triticum aestivum 32.76 4.00e-29 122.00
IUUC-Tur-126378 Triticum urartu 27.92 1.00e-27 117.00
IUUC-Tbe-128123 Tupaia belangeri 80.25 2.00e-173 601.00
IUUC-Vvi-131122 Vitis vinifera 31.16 1.00e-33 138.00
IUUC-Xtr-132682 Xenopus tropicalis 78.15 0.00e+00 785.00
IUUC-Xma-134041 Xiphophorus maculatus 69.80 0.00e+00 678.00
Created Date 25-Jun-2017

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