iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AT5G62100	AT5G62100.4	AT5G62100.4
AT5G62100	AT5G62100.5	AT5G62100.5
AT5G62100	AT5G62100.1	AT5G62100.1
AT5G62100	AT5G62100.3	AT5G62100.3
AT5G62100	AT5G62100.2	AT5G62100.2

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
TRANSFAC
Protein-protein Interaction
HINT
Protein 3D Structure
PDB	MMDB
Protein Expression/Proteomics

Status

Reviewed

Details

Family	Domain	References (PMIDs)
ULD/UDP/UBQ/UBQ_Other	UBQ_Other	16636050; 25320573

Classification

Family	E-value	Score	Start	End
ULD/UDP/UBQ/UBQ_Other	1.10e-12	48.5	39	109

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UBQ/UBQ_Other

   S: 3    vtvksldgs.eltlkvnpsdtVaeLKekiekklgippeqqrLiykGkiLeddktLady.glkdgstihllek 72
           ++v+   gs ++++++n+++t++eLK+ +++++g++++++++iyk+k+ +d k++ d+ g+kd+s+++l+e+
   Q: 39   IRVRVKYGSvHHEISINSQSTFGELKKILSGATGVHHQDMQIIYKDKE-RDSKMFLDLsGVKDRSKLILIED 109
           68999*******************************************.********************987 PP

Organism

Arabidopsis thaliana

Functional Description
(View)

Co-chaperone that regulates diverse cellular pathways, such as programmed cell death and stress responses.

Protein Sequence
(Fasta)

MMKMSIGTTT SGDGEMELRP GGMVVQKRTD HSSSVPRGIR VRVKYGSVHH EISINSQSTF 60
GELKKILSGA TGVHHQDMQI IYKDKERDSK MFLDLSGVKD RSKLILIEDP ISQEKRLLEL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTTCTTCTTG ATCTTTTTCA GAAATCAACT TCATCTCATC ATTCCTCTGT TTTTTTCTCT 60
CTATCTCTCT TAATAAAGAA AATGATGAAA ATGAGTATCG GAACAACAAC TTCCGGCGAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0002--3D-structure
KW-0025--Alternative splicing
KW-0143--Chaperone
KW-0181--Complete proteome
KW-0597--Phosphoprotein
KW-1185--Reference proteome

Interpro

IPR003103--BAG_domain
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom

PROSITE

PS51035--BAG
PS50053--UBIQUITIN_2

Pfam

PF02179--BAG

SMART

SM00264--BAG

KEGG

ath:AT5G62100

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Apl-003791	Anas platyrhynchos	35.71	4.20e-01	27.70
IUUC-Aly-005862	Arabidopsis lyrata	83.16	1.00e-119	421.00
IUUC-Bol-015166	Brassica oleracea	71.52	2.00e-111	394.00
IUUC-Bra-016943	Brassica rapa	70.13	4.00e-108	383.00
IUUC-Fox-037972	Fusarium oxysporum	24.26	2.20e-01	29.30
IUUC-Psi-093316	Pelodiscus sinensis	25.64	1.10e-01	29.60
IUUC-Pva-102408	Pteropus vampyrus	30.00	6.90e-02	31.20

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence