iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017867

Ensembl Protein ID

Bra002845.1-P

UniProt Accession

M4CF63; M4CF63_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra002845	Bra002845.1	Bra002845.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.20e-30	105.2	63	102
UBD/Beta-Prp	1.40e-44	153.5	113	307

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf...sdtllvsGsdDgtikvWDlrtgvllk 37
           gHtdsv  l++   +++l++++s+D+++++WD r+g++++
   Q: 63   GHTDSVDQLCWdpkHSDLVATASGDKSVRLWDARSGKCTQ 102
           8***********763399********************98 PP

UBD/Beta-Prp

   S: 58   vkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirv..wdletgqclee...tlsghdgvvncvvvhpd 148
           +++ pdg  ++ g +D+ + + d++++      ++ +++v  ++++ sgd +  ++   t++v  + le+ q   +   tl+ h++   c++++p+
   Q: 113  ITYRPDGTHIAVGNRDDELTILDVRKFNKSLYKRKFSYEVNEIAWNMSGDLFFLTTGLGTVEVlsYPLEKMQNDLKpvdTLTAHTAGCYCIAIDPK 208
           78999********************9988777777****************************8887777766666788***************** PP
   S: 149  gnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDg 244
           g++++ Gs+D+ v lWd++ + +lrt+t+  +++v+ +sf+++g++++s+s+d  + + ++qtg++v++  + ++ ++sv+  p+ ++l+ +++D+
   Q: 209  GRYFAVGSADSLVSLWDMSDMLCLRTFTK-LDSPVRTISFNHSGEYIASASEDLFIDIANVQTGRTVHQIPC-RAAMNSVEWNPKYNLLAYAGDDK 302
           ****************************9.**********************************97776665.7899******************* PP
   S: 245  siriW 249
           s + +
   Q: 303  SAKYY 307
           98766 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MEETIPFKNL HSREYQGHKK KVHSVAWNSN GTKLASGSVD QTARVWTIEP HGHSKVKDLE 60
LKGHTDSVDQ LCWDPKHSDL VATASGDKSV RLWDARSGKC TQQAELSGEN INITYRPDGT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAGGAGA CTATTCCTTT CAAGAATCTT CATAGCAGAG AGTATCAAGG TCACAAGAAG 60
AAGGTCTTCT TCTATTTTTT TGTTAAATCT TCATCTATTT TTTTTTTTGT AATTAAAAAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0000347--C:THO complex
GO:0010267--P:production of ta-siRNAs involved in RNA interference

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000099	Aegilops tauschii	75.00	7.00e-136	476.00
IUUC-Aml-001264	Ailuropoda melanoleuca	50.16	4.00e-89	321.00
IUUC-Atr-003050	Amborella trichopoda	82.66	7.00e-160	555.00
IUUC-Apl-003426	Anas platyrhynchos	44.40	3.00e-63	234.00
IUUC-Aca-004931	Anolis carolinensis	48.00	4.00e-61	227.00
IUUC-Aly-006237	Arabidopsis lyrata	90.37	1.00e-173	602.00
IUUC-Ath-007581	Arabidopsis thaliana	90.06	6.00e-173	599.00
IUUC-Acl-008253	Aspergillus clavatus	30.35	3.00e-40	158.00
IUUC-Afl-008519	Aspergillus flavus	33.78	3.00e-43	168.00
IUUC-Afu-008886	Aspergillus fumigatus	29.09	7.00e-35	141.00
IUUC-Ani-009275	Aspergillus nidulans	30.63	2.00e-40	159.00
IUUC-Ang-009862	Aspergillus niger	33.33	4.00e-42	164.00
IUUC-Ate-010247	Aspergillus terreus	30.38	1.00e-39	156.00
IUUC-Ame-010828	Astyanax mexicanus	50.00	2.00e-89	322.00
IUUC-Bgr-012163	Blumeria graminis	32.93	1.00e-34	139.00
IUUC-Bta-013514	Bos taurus	43.69	2.00e-74	272.00
IUUC-Bci-013639	Botrytis cinerea	31.41	6.00e-44	171.00
IUUC-Bdi-015049	Brachypodium distachyon	74.53	6.00e-141	493.00
IUUC-Bol-015401	Brassica oleracea	99.69	0.00e+00	672.00
IUUC-Cel-018699	Caenorhabditis elegans	30.07	8.00e-32	130.00
IUUC-Cja-019591	Callithrix jacchus	50.16	3.00e-89	321.00
IUUC-Cfa-020692	Canis familiaris	50.16	3.00e-89	321.00
IUUC-Cpo-022135	Cavia porcellus	44.23	4.00e-69	254.00
IUUC-Cre-022572	Chlamydomonas reinhardtii	35.14	3.00e-50	191.00
IUUC-Csa-023408	Chlorocebus sabaeus	50.16	4.00e-89	320.00
IUUC-Cho-024340	Choloepus hoffmanni	49.76	7.00e-55	206.00
IUUC-Cin-025418	Ciona intestinalis	52.27	7.00e-39	152.00
IUUC-Csv-026130	Ciona savignyi	53.70	1.00e-96	345.00
IUUC-Cgl-026744	Colletotrichum gloeosporioides	32.48	3.00e-45	175.00
IUUC-Cne-026775	Cryptococcus neoformans	39.50	1.00e-22	101.00
IUUC-Dre-028634	Danio rerio	50.00	2.00e-89	321.00
IUUC-Dno-029449	Dasypus novemcinctus	50.16	3.00e-89	321.00
IUUC-Dor-030301	Dipodomys ordii	54.32	2.00e-49	189.00
IUUC-Dse-031341	Dothistroma septosporum	28.67	2.00e-34	139.00
IUUC-Dme-031674	Drosophila melanogaster	49.69	3.00e-82	298.00
IUUC-Ete-033136	Echinops telfairi	50.16	8.00e-89	320.00
IUUC-Eca-034432	Equus caballus	45.83	4.00e-80	291.00
IUUC-Fca-035694	Felis catus	50.16	3.00e-89	321.00
IUUC-Fal-037328	Ficedula albicollis	50.00	7.00e-90	323.00
IUUC-Fox-037894	Fusarium oxysporum	33.23	4.00e-48	184.00
IUUC-Fso-038266	Fusarium solani	31.44	2.00e-43	169.00
IUUC-Gmo-039617	Gadus morhua	50.32	2.00e-89	322.00
IUUC-Ggr-039819	Gaeumannomyces graminis	31.41	1.00e-38	153.00
IUUC-Gga-041164	Gallus gallus	50.00	1.00e-89	322.00
IUUC-Gac-042407	Gasterosteus aculeatus	50.00	4.00e-91	327.00
IUUC-Gma-043663	Glycine max	82.87	9.00e-162	561.00
IUUC-Ggo-044989	Gorilla gorilla	50.16	4.00e-89	320.00
IUUC-Hsa-046784	Homo sapiens	50.16	5.00e-89	320.00
IUUC-Hvu-047633	Hordeum vulgare	72.32	8.00e-94	335.00
IUUC-Itr-048184	Ictidomys tridecemlineatus	35.58	1.00e-48	186.00
IUUC-Kpa-049182	Komagataella pastoris	22.18	9.00e-14	70.50
IUUC-Lch-049894	Latimeria chalumnae	50.00	3.00e-90	324.00
IUUC-Lpe-051061	Leersia perrieri	67.30	4.00e-120	423.00
IUUC-Loc-052424	Lepisosteus oculatus	50.00	3.00e-91	328.00
IUUC-Lma-053127	Leptosphaeria maculans	31.41	6.00e-45	175.00
IUUC-Laf-053396	Loxodonta africana	50.49	1.00e-89	322.00
IUUC-Mcc-055517	Macaca mulatta	50.16	5.00e-89	320.00
IUUC-Meu-056034	Macropus eugenii	50.16	2.00e-89	321.00
IUUC-Mor-057011	Magnaporthe oryzae	30.37	2.00e-25	108.00
IUUC-Mpo-057490	Magnaporthe poae	31.31	9.00e-39	153.00
IUUC-Mtr-057927	Medicago truncatula	81.00	5.00e-158	549.00
IUUC-Mla-058945	Melampsora laricipopulina	36.82	2.00e-50	191.00
IUUC-Mga-060155	Meleagris gallopavo	52.24	2.00e-73	268.00
IUUC-Mvi-060344	Microbotryum violaceum	31.25	3.00e-43	168.00
IUUC-Mmr-060834	Microcebus murinus	50.16	1.00e-89	322.00
IUUC-Mdo-063073	Monodelphis domestica	51.13	3.00e-83	301.00
IUUC-Mmu-063395	Mus musculus	50.16	3.00e-89	321.00
IUUC-Mac-064579	Musa acuminata	79.38	3.00e-153	533.00
IUUC-Mpu-066688	Mustela putorius furo	53.08	8.00e-80	290.00
IUUC-Mlu-067299	Myotis lucifugus	50.16	3.00e-89	321.00
IUUC-Nfi-068562	Neosartorya fischeri	30.75	5.00e-37	148.00
IUUC-Ncr-068654	Neurospora crassa	32.80	1.00e-40	160.00
IUUC-Nle-069736	Nomascus leucogenys	49.51	9.00e-88	316.00
IUUC-Ont-071763	Oreochromis niloticus	50.00	1.00e-91	329.00
IUUC-Ocu-074909	Oryctolagus cuniculus	50.16	2.00e-89	322.00
IUUC-Oba-075902	Oryza barthii	67.94	3.00e-121	427.00
IUUC-Obr-076613	Oryza brachyantha	74.92	7.00e-140	489.00
IUUC-Ogl-077009	Oryza glaberrima	74.92	4.00e-140	490.00
IUUC-Ogu-078344	Oryza glumaepatula	67.94	3.00e-121	427.00
IUUC-Oin-079773	Oryza indica	74.92	4.00e-140	490.00
IUUC-Olo-080474	Oryza longistaminata	72.55	2.00e-83	300.00
IUUC-Ome-081837	Oryza meridionalis	68.48	2.00e-60	224.00
IUUC-Oni-082263	Oryza nivara	67.94	3.00e-121	427.00
IUUC-Opu-083813	Oryza punctata	75.24	6.00e-141	493.00
IUUC-Oru-084610	Oryza rufipogon	67.94	3.00e-121	427.00
IUUC-Osa-085415	Oryza sativa	74.60	2.00e-139	488.00
IUUC-Ola-086659	Oryzias latipes	50.31	8.00e-92	329.00
IUUC-Olu-087649	Ostreococcus lucimarinus	41.16	2.00e-62	231.00
IUUC-Oga-087923	Otolemur garnettii	49.84	9.00e-89	319.00
IUUC-Oar-089688	Ovis aries	50.16	9.00e-89	319.00
IUUC-Ptr-091628	Pan troglodytes	50.16	5.00e-89	320.00
IUUC-Pan-092586	Papio anubis	49.68	2.00e-87	315.00
IUUC-Psi-093701	Pelodiscus sinensis	51.52	3.00e-59	220.00
IUUC-Pma-094465	Petromyzon marinus	49.68	7.00e-88	317.00
IUUC-Pno-094767	Phaeosphaeria nodorum	31.80	2.00e-42	166.00
IUUC-Ppa-095195	Physcomitrella patens	79.23	8.00e-151	525.00
IUUC-Pfo-097383	Poecilia formosa	50.64	4.00e-91	327.00
IUUC-Pab-098669	Pongo abelii	50.16	4.00e-89	321.00
IUUC-Pop-099409	Populus trichocarpa	82.87	2.00e-162	563.00
IUUC-Pca-100769	Procavia capensis	43.69	1.00e-69	256.00
IUUC-Ppe-101321	Prunus persica	83.54	2.00e-160	558.00
IUUC-Pva-102759	Pteropus vampyrus	50.16	2.00e-89	322.00
IUUC-Pgr-103535	Puccinia graminis	36.94	1.00e-55	209.00
IUUC-Ptt-103820	Puccinia triticina	36.62	2.00e-55	208.00
IUUC-Pte-104271	Pyrenophora teres	31.38	2.00e-39	155.00
IUUC-Pyt-104500	Pyrenophora triticirepentis	32.00	1.00e-35	143.00
IUUC-Rno-106126	Rattus norvegicus	50.16	3.00e-89	321.00
IUUC-Sha-107146	Sarcophilus harrisii	49.19	1.00e-86	312.00
IUUC-Sja-107865	Schizosaccharomyces japonicus	35.71	7.00e-54	203.00
IUUC-Spo-108324	Schizosaccharomyces pombe	38.05	2.00e-54	206.00
IUUC-Smo-108990	Selaginella moellendorffii	75.15	1.00e-147	515.00
IUUC-Sit-110773	Setaria italica	75.16	3.00e-137	480.00
IUUC-Sly-111619	Solanum lycopersicum	83.18	2.00e-162	564.00
IUUC-Stu-112241	Solanum tuberosum	83.18	2.00e-161	561.00
IUUC-Sbi-114842	Sorghum bicolor	74.84	1.00e-136	478.00
IUUC-Sre-115070	Sporisorium reilianum	32.37	2.00e-44	172.00
IUUC-Ssc-115581	Sus scrofa	50.16	3.00e-89	321.00
IUUC-Tgu-117354	Taeniopygia guttata	50.67	8.00e-87	313.00
IUUC-Tru-117745	Takifugu rubripes	49.22	4.00e-89	320.00
IUUC-Tni-120050	Tetraodon nigroviridis	48.91	1.00e-87	315.00
IUUC-Tca-121279	Theobroma cacao	85.36	4.00e-165	573.00
IUUC-Tre-121952	Trichoderma reesei	34.89	7.00e-51	193.00
IUUC-Tvi-122581	Trichoderma virens	34.56	8.00e-50	190.00
IUUC-Tae-125697	Triticum aestivum	73.60	2.00e-139	488.00
IUUC-Tur-126279	Triticum urartu	71.79	4.00e-134	470.00
IUUC-Tme-127000	Tuber melanosporum	32.97	3.00e-44	171.00
IUUC-Ttr-128405	Tursiops truncatus	50.57	3.00e-78	284.00
IUUC-Uma-129547	Ustilago maydis	33.33	3.00e-47	181.00
IUUC-Vda-129689	Verticillium dahliae	31.65	6.00e-38	150.00
IUUC-Vvi-131345	Vitis vinifera	85.36	3.00e-166	577.00
IUUC-Xtr-132136	Xenopus tropicalis	49.20	2.00e-87	315.00
IUUC-Xma-133767	Xiphophorus maculatus	50.00	4.00e-91	327.00
IUUC-Yli-134522	Yarrowia lipolytica	28.15	1.00e-32	133.00
IUUC-Zma-135816	Zea mays	73.57	2.00e-134	471.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence