iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Lch-050020

Ensembl Protein ID

ENSLACP00000002929.1

UniProt Accession

H2ZZV8; H2ZZV8_LATCH

Genbank Protein ID

ENSLACP00000002929

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AFYH01209076

Gene Name

DMXL1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSLACG00000002620.1	ENSLACT00000002954.1	ENSLACP00000002929.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	7.40e-16	57.9	2929	2966

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           H ++v ++a+ ++  ++++Gs  g++kvW+l+t+ ll+
   Q: 2929 HDSPVKAIALdPGeEYFITGSAEGNMKVWSLSTHSLLH 2966
           99*********889******************998876 PP

Organism

Latimeria chalumnae

Protein Sequence
(Fasta)

MNLHQVLTGA VNPGDNCFSV GSIEEQPFTA YASGCDIVIL GSYFERLQII PGAKHGNIQV 60
GCVDCSMQQG KIAASYGNVI CIFEPVRFLN RKNKPPTGLN YQWQKSGQII LQSVTHNLTW 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCCGGCCGAA TTTCATAATT AAGTGGACGG GAGATCGGTA ATCCGTGTTT TATTTATTGT 60
TTCATCTTAG GAGCCGGGTC TCCCTCTTTT TCTGGGCCCT AGACCTGGGG CCTTAATCCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR022033--Rav1p_C
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12234--Rav1p_C
PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001368	Ailuropoda melanoleuca	71.51	0.00e+00	4105.00
IUUC-Atr-002754	Amborella trichopoda	25.61	7.00e-21	95.50
IUUC-Apl-003377	Anas platyrhynchos	69.96	0.00e+00	4007.00
IUUC-Aca-004649	Anolis carolinensis	69.12	0.00e+00	3927.00
IUUC-Aly-006404	Arabidopsis lyrata	29.09	1.00e-33	139.00
IUUC-Ath-006612	Arabidopsis thaliana	29.09	2.00e-31	132.00
IUUC-Ame-010919	Astyanax mexicanus	64.90	0.00e+00	3068.00
IUUC-Bta-013088	Bos taurus	71.52	0.00e+00	4122.00
IUUC-Bdi-014471	Brachypodium distachyon	25.48	2.00e-22	100.00
IUUC-Bol-016375	Brassica oleracea	29.44	8.00e-32	134.00
IUUC-Bra-016630	Brassica rapa	29.19	1.00e-31	133.00
IUUC-Cja-019137	Callithrix jacchus	71.74	0.00e+00	4137.00
IUUC-Cfa-021215	Canis familiaris	71.41	0.00e+00	4123.00
IUUC-Cpo-022333	Cavia porcellus	67.43	0.00e+00	3760.00
IUUC-Csa-023151	Chlorocebus sabaeus	71.89	0.00e+00	4160.00
IUUC-Cho-024613	Choloepus hoffmanni	56.57	0.00e+00	1510.00
IUUC-Dno-029601	Dasypus novemcinctus	68.07	0.00e+00	3872.00
IUUC-Dor-030381	Dipodomys ordii	68.84	0.00e+00	1205.00
IUUC-Dme-031825	Drosophila melanogaster	37.25	0.00e+00	1490.00
IUUC-Ete-032464	Echinops telfairi	64.02	0.00e+00	1947.00
IUUC-Eeu-035011	Erinaceus europaeus	66.11	0.00e+00	1935.00
IUUC-Fca-035735	Felis catus	71.28	0.00e+00	4108.00
IUUC-Fal-037367	Ficedula albicollis	70.27	0.00e+00	3960.00
IUUC-Gmo-038687	Gadus morhua	58.99	0.00e+00	2383.00
IUUC-Gac-041986	Gasterosteus aculeatus	60.42	0.00e+00	3328.00
IUUC-Ggo-044811	Gorilla gorilla	71.59	0.00e+00	4139.00
IUUC-Hsa-045950	Homo sapiens	72.04	0.00e+00	4183.00
IUUC-Hvu-047213	Hordeum vulgare	24.33	2.00e-17	82.40
IUUC-Lpe-051382	Leersia perrieri	32.78	2.00e-40	162.00
IUUC-Loc-052909	Lepisosteus oculatus	71.57	0.00e+00	4146.00
IUUC-Laf-054195	Loxodonta africana	71.16	0.00e+00	4122.00
IUUC-Mcc-055646	Macaca mulatta	72.01	0.00e+00	4169.00
IUUC-Meu-056627	Macropus eugenii	66.70	0.00e+00	1216.00
IUUC-Mmr-060784	Microcebus murinus	70.44	0.00e+00	4019.00
IUUC-Mdo-062914	Monodelphis domestica	71.03	0.00e+00	4172.00
IUUC-Mmu-063808	Mus musculus	69.64	0.00e+00	4000.00
IUUC-Mlu-067458	Myotis lucifugus	69.05	0.00e+00	3976.00
IUUC-Nle-070123	Nomascus leucogenys	70.98	0.00e+00	4098.00
IUUC-Ont-071658	Oreochromis niloticus	60.34	0.00e+00	3398.00
IUUC-Oan-072796	Ornithorhynchus anatinus	63.48	4.00e-69	253.00
IUUC-Ocu-074048	Oryctolagus cuniculus	69.54	0.00e+00	3980.00
IUUC-Obr-076145	Oryza brachyantha	31.56	1.00e-38	156.00
IUUC-Opu-084153	Oryza punctata	32.57	5.00e-40	160.00
IUUC-Oru-084415	Oryza rufipogon	32.57	4.00e-40	161.00
IUUC-Osa-085332	Oryza sativa	24.84	9.00e-25	108.00
IUUC-Ola-086945	Oryzias latipes	59.76	0.00e+00	3322.00
IUUC-Oga-088816	Otolemur garnettii	70.57	0.00e+00	4052.00
IUUC-Oar-089618	Ovis aries	71.52	0.00e+00	4117.00
IUUC-Ptr-090937	Pan troglodytes	72.07	0.00e+00	4178.00
IUUC-Pan-092151	Papio anubis	71.93	0.00e+00	4196.00
IUUC-Psi-093590	Pelodiscus sinensis	71.57	0.00e+00	4125.00
IUUC-Ppa-095505	Physcomitrella patens	28.20	3.00e-42	168.00
IUUC-Pfo-097445	Poecilia formosa	59.43	0.00e+00	3273.00
IUUC-Pab-098237	Pongo abelii	71.16	0.00e+00	4097.00
IUUC-Pop-098812	Populus trichocarpa	31.33	3.00e-30	128.00
IUUC-Pca-101008	Procavia capensis	72.37	0.00e+00	1242.00
IUUC-Pva-102348	Pteropus vampyrus	66.30	0.00e+00	2464.00
IUUC-Rno-105076	Rattus norvegicus	70.39	0.00e+00	4028.00
IUUC-Sha-106860	Sarcophilus harrisii	71.90	0.00e+00	4241.00
IUUC-Smo-109573	Selaginella moellendorffii	26.96	9.00e-19	87.80
IUUC-Sit-109981	Setaria italica	24.77	6.00e-16	80.10
IUUC-Sly-110968	Solanum lycopersicum	32.24	4.00e-37	151.00
IUUC-Sar-113751	Sorex araneus	68.81	0.00e+00	1847.00
IUUC-Ssc-116371	Sus scrofa	71.82	0.00e+00	4155.00
IUUC-Tgu-117108	Taeniopygia guttata	70.17	0.00e+00	4018.00
IUUC-Tru-117628	Takifugu rubripes	59.59	0.00e+00	3344.00
IUUC-Tsy-118837	Tarsius syrichta	65.90	0.00e+00	2453.00
IUUC-Tbe-127953	Tupaia belangeri	71.27	0.00e+00	2236.00
IUUC-Ttr-128991	Tursiops truncatus	70.25	0.00e+00	3488.00
IUUC-Vpa-130309	Vicugna pacos	70.01	0.00e+00	2311.00
IUUC-Xtr-132582	Xenopus tropicalis	67.38	0.00e+00	3906.00
IUUC-Xma-134109	Xiphophorus maculatus	59.59	0.00e+00	3370.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence