iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Cpo-022190

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAKN02053099

Gene Name

ERCC8

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSCPOG00000004642.3	ENSCPOT00000004691.2	ENSCPOP00000004183.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.40e-29	100.1	184	218

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf...sdtllvsGsdDgtikvWDlrt 32
           gH  ++ ++++    d +l+++s D  +k+WD+r+
   Q: 184  GHRQEILAVSWsprYDYILATASADSRVKLWDVRR 218
           8**********96543678*************986 PP

Organism

Cavia porcellus

Protein Sequence
(Fasta)

MLGFLSARQA GLEDPLRLRR AEATRRVLGL ELNKDRDVER IHDSGVNTLD IEPVEGRYML 60
SGGSDGAIGL YDLENSSRQP YYTCKAVCSI GRSHPDVHKY SVETVQWYPH DTGMFTSSSF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCTGGGCT TTTTGTCCGC GCGACAAGCG GGTTTGGAGG ACCCTCTTCG CCTCCGGAGA 60
GCGGAGGCCA CGCGAAGGTA CAGAAATTTT GCCTTTTCCA CTTGCAAGTT TATTAAAATC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0031464--C:Cul4A-RING E3 ubiquitin ligase complex
GO:0016363--C:nuclear matrix
GO:0000109--C:nucleotide-excision repair complex
GO:0004842--F:ubiquitin-protein transferase activity
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0051865--P:protein autoubiquitination
GO:0000209--P:protein polyubiquitination
GO:0006979--P:response to oxidative stress
GO:0009411--P:response to UV
GO:0010165--P:response to X-ray
GO:0006283--P:transcription-coupled nucleotide-excision repair

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001170	Aegilops tauschii	30.41	2.00e-36	147.00
IUUC-Aml-002201	Ailuropoda melanoleuca	93.43	0.00e+00	781.00
IUUC-Atr-002784	Amborella trichopoda	36.17	2.00e-40	160.00
IUUC-Apl-003202	Anas platyrhynchos	80.00	0.00e+00	650.00
IUUC-Aca-004708	Anolis carolinensis	81.32	8.00e-178	615.00
IUUC-Aly-006144	Arabidopsis lyrata	33.58	3.00e-65	242.00
IUUC-Ath-006673	Arabidopsis thaliana	39.71	2.00e-45	176.00
IUUC-Acl-008195	Aspergillus clavatus	39.03	2.00e-43	170.00
IUUC-Afl-008406	Aspergillus flavus	37.15	8.00e-40	157.00
IUUC-Afu-008759	Aspergillus fumigatus	36.80	5.00e-41	162.00
IUUC-Ani-009380	Aspergillus nidulans	36.09	8.00e-42	164.00
IUUC-Ang-009820	Aspergillus niger	37.15	4.00e-40	158.00
IUUC-Aor-010092	Aspergillus oryzae	37.78	6.00e-45	174.00
IUUC-Ate-010491	Aspergillus terreus	37.37	5.00e-46	178.00
IUUC-Bta-012825	Bos taurus	93.45	0.00e+00	776.00
IUUC-Bci-013856	Botrytis cinerea	32.87	4.00e-54	205.00
IUUC-Bdi-014899	Brachypodium distachyon	30.94	1.00e-53	204.00
IUUC-Bol-015337	Brassica oleracea	37.50	5.00e-44	172.00
IUUC-Bra-018089	Brassica rapa	32.33	1.00e-65	243.00
IUUC-Cja-018725	Callithrix jacchus	93.94	0.00e+00	787.00
IUUC-Cfa-021162	Canis familiaris	92.68	0.00e+00	777.00
IUUC-Cre-022960	Chlamydomonas reinhardtii	35.91	9.00e-40	157.00
IUUC-Csa-023610	Chlorocebus sabaeus	94.44	0.00e+00	792.00
IUUC-Cho-024689	Choloepus hoffmanni	91.35	0.00e+00	711.00
IUUC-Cin-025324	Ciona intestinalis	39.22	6.00e-81	294.00
IUUC-Csv-026059	Ciona savignyi	38.12	3.00e-73	268.00
IUUC-Cgl-026384	Colletotrichum gloeosporioides	34.18	5.00e-40	158.00
IUUC-Cme-027182	Cyanidioschyzon merolae	28.05	3.00e-13	70.10
IUUC-Dre-028696	Danio rerio	71.50	2.00e-175	608.00
IUUC-Dno-029102	Dasypus novemcinctus	92.93	0.00e+00	781.00
IUUC-Dor-030361	Dipodomys ordii	76.01	1.00e-177	615.00
IUUC-Dse-031167	Dothistroma septosporum	29.69	5.00e-44	172.00
IUUC-Ete-032856	Echinops telfairi	74.49	5.00e-177	613.00
IUUC-Eca-033611	Equus caballus	93.79	0.00e+00	674.00
IUUC-Eeu-034583	Erinaceus europaeus	70.71	3.00e-160	557.00
IUUC-Fca-036481	Felis catus	92.68	0.00e+00	777.00
IUUC-Fal-037327	Ficedula albicollis	78.53	4.00e-165	573.00
IUUC-Fox-037684	Fusarium oxysporum	31.06	1.00e-44	173.00
IUUC-Fso-038306	Fusarium solani	32.05	6.00e-56	211.00
IUUC-Gmo-039043	Gadus morhua	68.86	1.00e-164	572.00
IUUC-Ggr-039783	Gaeumannomyces graminis	29.25	8.00e-39	154.00
IUUC-Gga-041085	Gallus gallus	84.48	0.00e+00	632.00
IUUC-Gac-042328	Gasterosteus aculeatus	67.66	7.00e-159	553.00
IUUC-Gma-043004	Glycine max	33.02	2.00e-56	213.00
IUUC-Ggo-045627	Gorilla gorilla	85.82	0.00e+00	709.00
IUUC-Hsa-046028	Homo sapiens	94.44	0.00e+00	792.00
IUUC-Hvu-047678	Hordeum vulgare	32.91	1.00e-35	143.00
IUUC-Itr-048648	Ictidomys tridecemlineatus	93.43	0.00e+00	786.00
IUUC-Kpa-049386	Komagataella pastoris	30.38	2.00e-43	169.00
IUUC-Lch-050590	Latimeria chalumnae	79.60	1.00e-161	561.00
IUUC-Lpe-051725	Leersia perrieri	32.49	2.00e-36	146.00
IUUC-Loc-051788	Lepisosteus oculatus	75.00	0.00e+00	626.00
IUUC-Lma-053082	Leptosphaeria maculans	33.58	9.00e-56	211.00
IUUC-Laf-053809	Loxodonta africana	92.95	0.00e+00	780.00
IUUC-Mcc-054998	Macaca mulatta	93.95	2.00e-160	557.00
IUUC-Meu-055929	Macropus eugenii	78.14	0.00e+00	637.00
IUUC-Mor-057003	Magnaporthe oryzae	34.23	1.00e-48	187.00
IUUC-Mtr-057921	Medicago truncatula	30.51	9.00e-54	204.00
IUUC-Mga-059449	Meleagris gallopavo	66.18	2.00e-126	445.00
IUUC-Mmr-061609	Microcebus murinus	91.30	0.00e+00	734.00
IUUC-Mdo-062564	Monodelphis domestica	86.15	0.00e+00	724.00
IUUC-Mmu-063904	Mus musculus	89.17	0.00e+00	750.00
IUUC-Mac-064716	Musa acuminata	30.24	2.00e-50	193.00
IUUC-Mpu-066617	Mustela putorius furo	92.68	0.00e+00	778.00
IUUC-Mlu-067054	Myotis lucifugus	91.16	0.00e+00	764.00
IUUC-Nfi-068467	Neosartorya fischeri	37.30	3.00e-35	142.00
IUUC-Nle-069731	Nomascus leucogenys	94.44	0.00e+00	792.00
IUUC-Opr-070297	Ochotona princeps	68.62	3.00e-87	315.00
IUUC-Ont-072558	Oreochromis niloticus	71.07	4.00e-165	573.00
IUUC-Oan-072864	Ornithorhynchus anatinus	87.72	4.00e-27	112.00
IUUC-Ocu-074415	Oryctolagus cuniculus	93.69	0.00e+00	787.00
IUUC-Oba-075735	Oryza barthii	39.47	2.00e-40	160.00
IUUC-Obr-076387	Oryza brachyantha	38.86	2.00e-45	176.00
IUUC-Ogl-077924	Oryza glaberrima	40.48	1.00e-17	83.20
IUUC-Ogu-078186	Oryza glumaepatula	34.37	7.00e-63	234.00
IUUC-Oin-079389	Oryza indica	34.56	1.00e-47	183.00
IUUC-Olo-080916	Oryza longistaminata	28.92	2.00e-16	78.60
IUUC-Ome-081471	Oryza meridionalis	40.00	9.00e-41	160.00
IUUC-Oni-082449	Oryza nivara	39.18	2.00e-40	160.00
IUUC-Opu-083210	Oryza punctata	40.00	4.00e-43	169.00
IUUC-Oru-085159	Oryza rufipogon	40.53	2.00e-43	169.00
IUUC-Osa-085926	Oryza sativa	41.22	2.00e-33	135.00
IUUC-Ola-087084	Oryzias latipes	68.10	2.00e-167	581.00
IUUC-Olu-087853	Ostreococcus lucimarinus	28.80	3.00e-39	155.00
IUUC-Oga-089008	Otolemur garnettii	91.98	0.00e+00	768.00
IUUC-Oar-089259	Ovis aries	92.95	0.00e+00	773.00
IUUC-Ptr-091112	Pan troglodytes	93.64	0.00e+00	781.00
IUUC-Pan-092303	Papio anubis	94.53	7.00e-72	261.00
IUUC-Psi-093050	Pelodiscus sinensis	82.91	0.00e+00	696.00
IUUC-Pma-094259	Petromyzon marinus	58.17	7.00e-132	463.00
IUUC-Pno-094798	Phaeosphaeria nodorum	32.07	5.00e-53	201.00
IUUC-Ppa-095477	Physcomitrella patens	38.56	1.00e-47	184.00
IUUC-Pfo-096855	Poecilia formosa	67.41	1.00e-163	568.00
IUUC-Pab-098096	Pongo abelii	93.94	0.00e+00	787.00
IUUC-Pop-098800	Populus trichocarpa	36.40	8.00e-46	177.00
IUUC-Pca-100187	Procavia capensis	95.15	4.00e-116	411.00
IUUC-Ppe-101759	Prunus persica	36.68	2.00e-44	173.00
IUUC-Pva-102438	Pteropus vampyrus	78.54	4.00e-92	331.00
IUUC-Pte-104197	Pyrenophora teres	33.62	2.00e-50	193.00
IUUC-Pyt-104421	Pyrenophora triticirepentis	35.31	2.00e-51	196.00
IUUC-Rno-106087	Rattus norvegicus	89.17	0.00e+00	752.00
IUUC-Sce-106276	Saccharomyces cerevisiae	26.29	1.00e-12	67.80
IUUC-Sha-106831	Sarcophilus harrisii	82.66	0.00e+00	687.00
IUUC-Sja-107681	Schizosaccharomyces japonicus	32.54	6.00e-55	207.00
IUUC-Spo-108294	Schizosaccharomyces pombe	34.60	7.00e-64	237.00
IUUC-Ssl-108613	Sclerotinia sclerotiorum	33.24	2.00e-53	202.00
IUUC-Smo-109008	Selaginella moellendorffii	39.90	3.00e-75	275.00
IUUC-Sit-110300	Setaria italica	30.60	9.00e-53	201.00
IUUC-Sly-111441	Solanum lycopersicum	31.85	9.00e-51	194.00
IUUC-Stu-111995	Solanum tuberosum	29.91	6.00e-47	181.00
IUUC-Sar-113196	Sorex araneus	81.75	1.00e-127	449.00
IUUC-Sbi-113790	Sorghum bicolor	40.53	2.00e-42	166.00
IUUC-Ssc-115609	Sus scrofa	92.93	0.00e+00	783.00
IUUC-Tgu-116927	Taeniopygia guttata	79.95	0.00e+00	662.00
IUUC-Tru-118164	Takifugu rubripes	69.33	6.00e-172	596.00
IUUC-Tsy-119151	Tarsius syrichta	87.88	0.00e+00	728.00
IUUC-Tni-120896	Tetraodon nigroviridis	68.75	2.00e-162	564.00
IUUC-Tca-121592	Theobroma cacao	37.33	6.00e-45	175.00
IUUC-Tre-122023	Trichoderma reesei	35.58	3.00e-50	192.00
IUUC-Tvi-122507	Trichoderma virens	35.10	5.00e-51	195.00
IUUC-Tae-125614	Triticum aestivum	39.29	6.00e-43	167.00
IUUC-Tur-126092	Triticum urartu	30.62	2.00e-34	139.00
IUUC-Tbe-127422	Tupaia belangeri	70.81	3.00e-151	527.00
IUUC-Ttr-129097	Tursiops truncatus	90.91	0.00e+00	763.00
IUUC-Vda-130014	Verticillium dahliae	36.71	1.00e-51	197.00
IUUC-Vpa-130782	Vicugna pacos	92.70	0.00e+00	776.00
IUUC-Vvi-131494	Vitis vinifera	35.34	2.00e-44	173.00
IUUC-Xtr-132165	Xenopus tropicalis	77.84	0.00e+00	629.00
IUUC-Xma-133205	Xiphophorus maculatus	68.08	4.00e-167	580.00
IUUC-Yli-134614	Yarrowia lipolytica	33.33	1.00e-60	226.00
IUUC-Zma-135861	Zea mays	31.78	3.00e-47	182.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence