iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-100021

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

KE702967

Gene Name

POPTRDRAFT_939276; POPTR_0258s00210g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0258s00210	POPTR_0258s00210.1	POPTR_0258s00210.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	5.40e-06	27.9	23	72

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkw....pglknssskefrCPlCr 46
           C+iCl +f ++ ++  C H f+ +C+ +w      +k+    + +CPlC+
   Q: 23   CPICLAPFLQESYLDTCFHKFCYKCILQWtkvvSSQKSRRPSSVKCPLCK 72
           ********77799999*************7765333434555557****7 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MDQQDSNSNK ENQSCSSSDS NPCPICLAPF LQESYLDTCF HKFCYKCILQ WTKVVSSQKS 60
RRPSSVKCPL CKTDNFSLIY GYDGSSFQRH YVNQGFEDSS FFSKAHKYRL QCYYTEPGCI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATTACAGGAA CCAACTAAAA AAATAAGATT CATATTTGCT TCAGTTGAAG GCAGCCATTG 60
AAGCATGAAT TAGGACACAA AAACCCAACA AATCCATGAA GTTGAATTGA AAAAATGGAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR018957--Znf_C3HC4_RING-type
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00097--zf-C3HC4

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

KEGG

pop:POPTR_0258s00210g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000940	Aegilops tauschii	49.30	4.00e-59	220.00
IUUC-Apl-003666	Anas platyrhynchos	43.10	7.00e-10	59.30
IUUC-Ath-007299	Arabidopsis thaliana	55.60	4.00e-83	300.00
IUUC-Bol-015307	Brassica oleracea	57.59	1.00e-86	311.00
IUUC-Bra-017073	Brassica rapa	47.33	5.00e-61	226.00
IUUC-Hvu-047532	Hordeum vulgare	40.22	3.00e-33	134.00
IUUC-Lpe-051274	Leersia perrieri	46.81	3.00e-57	214.00
IUUC-Obr-076084	Oryza brachyantha	51.58	1.00e-64	238.00
IUUC-Olo-080517	Oryza longistaminata	46.60	1.00e-53	202.00
IUUC-Opu-083698	Oryza punctata	49.56	3.00e-64	238.00
IUUC-Osa-085962	Oryza sativa	44.22	4.00e-33	133.00
IUUC-Sre-115218	Sporisorium reilianum	47.37	2.00e-04	40.40
IUUC-Tca-121484	Theobroma cacao	61.80	3.00e-92	330.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence