iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017096

Ensembl Protein ID

Bra016657.1-P

UniProt Accession

M4DJH9; M4DJH9_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra016657	Bra016657.1	Bra016657.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.50e-29	101.0	373	405
UBD/Beta-Prp	1.40e-75	255.3	336	583

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 5    svtclaf.sd.tllvsGsdDgtikvWDlrtgvl 35
           +v+c+ + sd  +l++G+dD+++kvW++ +g +
   Q: 373  DVNCVTYsSDsQFLATGADDNKVKVWNVASGAC 405
           79******999*****************99866 PP

UBD/Beta-Prp

   S: 18   fspdksllatgsrd.gtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsG 112
           f   +++l+ g++  g + vw++++++++ + +gh   v++v++s+d+++l+tg++D+ +kvw++ +g c++t+++h++ v++l+f++++++l+s+
   Q: 336  FNGRGNWLTFGCAKlGQLLVWEWRSESYILKQQGHYFDVNCVTYSSDSQFLATGADDNKVKVWNVASGACFITFTEHTNAVTALHFMADNHSLLSA 431
           5667899999997658999***************************************************************************** PP
   S: 113  shdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrt.vrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklw 207
           s d t+r wd + ++ +++  +++ +   +++ +p+g+++ +G+lD++ + +W+ ktg++ + l g h+ +v+ l f++  + l+s s d+tv+lw
   Q: 432  SLDGTVRAWDFRRYKNYKTYTTPTPRQFVSLTADPSGDVVCAGTLDSFeIFVWSKKTGQIKDILNG-HEAPVHGLMFSPLTQILASSSWDNTVRLW 526
           *******************999999999******************965****************9.***************************** PP
   S: 208  dlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktlqlhn 264
           ++ +++  ++   h+  v+ v f p+++ l+s++ Dg+i +Wd+  g l+ t+++++
   Q: 527  NVFASKGTVETFQHNHDVLTVTFRPDGKQLASCTLDGQIHFWDTVDGVLMYTIEGRR 583
           ***8888888999*******************************9999999998877 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MNYRFQNLLG APYRGGNAVI TQNTQLISPV GNRVSVTDLS KHHSITLPVN TSSNICRLAA 60
SPDGTFLIAV DENNRCLFIN VPRRAVLHRM RFDGKVGALK FSPDGKFFAV GVGKLVEIWE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAACTACC GCTTCCAAAA CCTACTCGGC GCGCCCTACA GAGGCGGAAA CGCAGTCATA 60
ACCCAAAACA CTCAGCTCAT CTCCCCCGTC GGCAACCGCG TCTCCGTCAC CGACCTCAGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR027145--PWP2
IPR007148--SSU_processome_Utp12
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04003--Utp12
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001932	Ailuropoda melanoleuca	40.14	0.00e+00	694.00
IUUC-Apl-003219	Anas platyrhynchos	41.01	0.00e+00	709.00
IUUC-Aca-004950	Anolis carolinensis	42.28	0.00e+00	719.00
IUUC-Aly-006213	Arabidopsis lyrata	88.62	0.00e+00	1591.00
IUUC-Ath-006593	Arabidopsis thaliana	88.00	0.00e+00	1577.00
IUUC-Ago-007916	Ashbya gossypii	40.66	0.00e+00	669.00
IUUC-Acl-008225	Aspergillus clavatus	43.27	0.00e+00	734.00
IUUC-Afl-008390	Aspergillus flavus	43.39	0.00e+00	746.00
IUUC-Afu-009039	Aspergillus fumigatus	43.85	0.00e+00	736.00
IUUC-Ani-009228	Aspergillus nidulans	40.31	0.00e+00	629.00
IUUC-Ang-009663	Aspergillus niger	42.51	0.00e+00	705.00
IUUC-Aor-009923	Aspergillus oryzae	43.39	0.00e+00	746.00
IUUC-Ate-010264	Aspergillus terreus	43.72	0.00e+00	743.00
IUUC-Ame-010790	Astyanax mexicanus	35.15	2.00e-67	249.00
IUUC-Bgr-012066	Blumeria graminis	41.89	0.00e+00	713.00
IUUC-Bta-012399	Bos taurus	41.35	0.00e+00	696.00
IUUC-Bci-013757	Botrytis cinerea	42.79	0.00e+00	699.00
IUUC-Bdi-015028	Brachypodium distachyon	66.33	0.00e+00	1151.00
IUUC-Bol-016521	Brassica oleracea	97.73	0.00e+00	1716.00
IUUC-Cel-018690	Caenorhabditis elegans	32.30	6.00e-139	488.00
IUUC-Cja-019229	Callithrix jacchus	41.59	0.00e+00	714.00
IUUC-Cfa-020504	Canis familiaris	40.61	0.00e+00	697.00
IUUC-Cpo-021574	Cavia porcellus	42.13	0.00e+00	729.00
IUUC-Csa-023436	Chlorocebus sabaeus	42.04	0.00e+00	698.00
IUUC-Cin-025397	Ciona intestinalis	40.41	5.00e-159	554.00
IUUC-Csv-026194	Ciona savignyi	43.69	4.00e-136	478.00
IUUC-Cgl-026684	Colletotrichum gloeosporioides	40.72	0.00e+00	664.00
IUUC-Cne-027031	Cryptococcus neoformans	42.37	0.00e+00	739.00
IUUC-Cme-027276	Cyanidioschyzon merolae	31.33	4.00e-106	379.00
IUUC-Dre-027514	Danio rerio	40.59	0.00e+00	691.00
IUUC-Dno-029191	Dasypus novemcinctus	41.28	5.00e-179	620.00
IUUC-Dor-030149	Dipodomys ordii	41.62	0.00e+00	714.00
IUUC-Dse-031260	Dothistroma septosporum	45.61	6.00e-148	517.00
IUUC-Dme-032043	Drosophila melanogaster	37.61	7.00e-172	597.00
IUUC-Ete-033102	Echinops telfairi	44.37	5.00e-148	518.00
IUUC-Eca-033223	Equus caballus	41.56	0.00e+00	713.00
IUUC-Fca-035795	Felis catus	38.80	0.00e+00	651.00
IUUC-Fal-036830	Ficedula albicollis	41.01	0.00e+00	692.00
IUUC-Fox-037835	Fusarium oxysporum	40.83	0.00e+00	673.00
IUUC-Fso-038324	Fusarium solani	41.12	0.00e+00	681.00
IUUC-Gmo-039355	Gadus morhua	39.96	0.00e+00	684.00
IUUC-Ggr-039840	Gaeumannomyces graminis	40.11	0.00e+00	631.00
IUUC-Gga-040907	Gallus gallus	46.64	1.00e-150	526.00
IUUC-Gac-042624	Gasterosteus aculeatus	40.27	0.00e+00	681.00
IUUC-Gma-043034	Glycine max	70.86	0.00e+00	1335.00
IUUC-Hsa-046327	Homo sapiens	42.04	0.00e+00	719.00
IUUC-Hvu-047416	Hordeum vulgare	67.01	0.00e+00	1170.00
IUUC-Itr-049083	Ictidomys tridecemlineatus	42.94	0.00e+00	730.00
IUUC-Kpa-049150	Komagataella pastoris	40.34	0.00e+00	634.00
IUUC-Lch-049460	Latimeria chalumnae	40.14	4.00e-176	611.00
IUUC-Lpe-050840	Leersia perrieri	66.52	0.00e+00	1170.00
IUUC-Loc-052733	Lepisosteus oculatus	40.07	0.00e+00	691.00
IUUC-Lma-053277	Leptosphaeria maculans	42.16	0.00e+00	706.00
IUUC-Laf-054294	Loxodonta africana	41.60	0.00e+00	690.00
IUUC-Mcc-054624	Macaca mulatta	42.04	0.00e+00	718.00
IUUC-Meu-056665	Macropus eugenii	36.44	5.00e-125	441.00
IUUC-Mor-057288	Magnaporthe oryzae	41.03	0.00e+00	671.00
IUUC-Mpo-057594	Magnaporthe poae	39.89	0.00e+00	632.00
IUUC-Mla-058846	Melampsora laricipopulina	42.83	0.00e+00	723.00
IUUC-Mga-059207	Meleagris gallopavo	36.10	2.00e-174	606.00
IUUC-Mmr-061264	Microcebus murinus	42.15	0.00e+00	691.00
IUUC-Mdo-062327	Monodelphis domestica	40.94	0.00e+00	707.00
IUUC-Mmu-063542	Mus musculus	41.12	0.00e+00	692.00
IUUC-Mac-065142	Musa acuminata	66.89	0.00e+00	1205.00
IUUC-Mpu-066098	Mustela putorius furo	40.83	2.00e-177	615.00
IUUC-Mlu-067056	Myotis lucifugus	37.93	2.00e-169	589.00
IUUC-Nfi-068323	Neosartorya fischeri	43.60	0.00e+00	739.00
IUUC-Ncr-068925	Neurospora crassa	40.56	0.00e+00	697.00
IUUC-Nle-068970	Nomascus leucogenys	42.05	0.00e+00	718.00
IUUC-Ont-071252	Oreochromis niloticus	40.45	0.00e+00	687.00
IUUC-Oan-072737	Ornithorhynchus anatinus	39.98	0.00e+00	682.00
IUUC-Obr-076617	Oryza brachyantha	66.14	0.00e+00	1184.00
IUUC-Oin-079813	Oryza indica	66.70	0.00e+00	1188.00
IUUC-Olo-080265	Oryza longistaminata	66.14	0.00e+00	1191.00
IUUC-Opu-084005	Oryza punctata	67.00	0.00e+00	1200.00
IUUC-Ola-086822	Oryzias latipes	40.70	0.00e+00	684.00
IUUC-Oga-088887	Otolemur garnettii	41.26	0.00e+00	699.00
IUUC-Oar-090110	Ovis aries	40.99	0.00e+00	664.00
IUUC-Pan-092808	Papio anubis	42.08	0.00e+00	728.00
IUUC-Psi-093954	Pelodiscus sinensis	40.81	0.00e+00	712.00
IUUC-Pno-094922	Phaeosphaeria nodorum	42.99	0.00e+00	723.00
IUUC-Pfo-097175	Poecilia formosa	41.18	0.00e+00	708.00
IUUC-Pab-098155	Pongo abelii	42.18	0.00e+00	719.00
IUUC-Pop-099635	Populus trichocarpa	74.33	0.00e+00	1345.00
IUUC-Pca-100947	Procavia capensis	40.16	0.00e+00	664.00
IUUC-Ppe-101552	Prunus persica	74.35	0.00e+00	1387.00
IUUC-Pva-102744	Pteropus vampyrus	38.20	8.00e-172	597.00
IUUC-Pgr-103389	Puccinia graminis	42.68	0.00e+00	697.00
IUUC-Pte-104079	Pyrenophora teres	43.21	0.00e+00	720.00
IUUC-Pyt-104656	Pyrenophora triticirepentis	43.21	0.00e+00	719.00
IUUC-Rno-105502	Rattus norvegicus	40.91	0.00e+00	709.00
IUUC-Sce-106390	Saccharomyces cerevisiae	40.85	0.00e+00	690.00
IUUC-Sha-107264	Sarcophilus harrisii	40.79	1.00e-91	329.00
IUUC-Sja-107674	Schizosaccharomyces japonicus	40.23	0.00e+00	681.00
IUUC-Spo-108348	Schizosaccharomyces pombe	42.14	0.00e+00	702.00
IUUC-Smo-108982	Selaginella moellendorffii	57.45	0.00e+00	1030.00
IUUC-Sit-110304	Setaria italica	66.89	0.00e+00	1222.00
IUUC-Sly-111620	Solanum lycopersicum	76.43	0.00e+00	925.00
IUUC-Sbi-114702	Sorghum bicolor	66.74	0.00e+00	1200.00
IUUC-Sre-115129	Sporisorium reilianum	42.86	0.00e+00	696.00
IUUC-Ssc-115931	Sus scrofa	42.97	2.00e-94	338.00
IUUC-Tgu-116787	Taeniopygia guttata	40.81	0.00e+00	694.00
IUUC-Tru-118218	Takifugu rubripes	40.52	0.00e+00	697.00
IUUC-Tsy-119401	Tarsius syrichta	44.49	1.00e-120	427.00
IUUC-Tni-120046	Tetraodon nigroviridis	39.60	0.00e+00	657.00
IUUC-Tca-121685	Theobroma cacao	73.84	0.00e+00	1379.00
IUUC-Tre-122154	Trichoderma reesei	42.04	0.00e+00	709.00
IUUC-Tvi-122451	Trichoderma virens	41.53	0.00e+00	701.00
IUUC-Tae-125397	Triticum aestivum	74.07	0.00e+00	719.00
IUUC-Tur-126650	Triticum urartu	67.68	0.00e+00	1088.00
IUUC-Tme-127005	Tuber melanosporum	43.37	0.00e+00	717.00
IUUC-Tbe-128102	Tupaia belangeri	41.01	2.00e-119	423.00
IUUC-Ttr-128259	Tursiops truncatus	41.82	0.00e+00	691.00
IUUC-Uma-129511	Ustilago maydis	43.19	0.00e+00	706.00
IUUC-Vda-129833	Verticillium dahliae	38.57	1.00e-174	606.00
IUUC-Vvi-131572	Vitis vinifera	69.09	0.00e+00	1266.00
IUUC-Xtr-131776	Xenopus tropicalis	34.78	4.00e-63	235.00
IUUC-Xma-133887	Xiphophorus maculatus	40.07	0.00e+00	685.00
IUUC-Yli-134427	Yarrowia lipolytica	40.67	0.00e+00	689.00
IUUC-Zma-135980	Zea mays	66.63	0.00e+00	1159.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence