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Basic Information Integrated Annotations
Tag Content
iUUCD ID IUUC-Cel-018690
Ensembl Protein ID F55F8.3
UniProt Accession P91341; PWP2_CAEEL
Genbank Protein ID CCD71885.1
Protein Name Periodic tryptophan protein 2 homolog
Genbank Nucleotide ID FO081477
Gene Name F55F8.3
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
WBGene00018891 F55F8.3 F55F8.3
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
microRNARAID2
Protein-protein Interaction
IID
Post-translational Modifications (PTMs)
dbPAFdbPTMPhospho.ELM
Protein Expression/Proteomics
GPMDB
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 1.90e-21 75.6 486 514
UBD/Beta-Prp 3.30e-50 171.2 267 464
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD
   S: 1    gHtdsvtclafsdtllvsGsdDgtikvWD 29
           gH++ +++++ +++++vsGs+D tik+W 
   Q: 486  GHESAISSIDIHGNHIVSGSWDRTIKMWT 514
           8**********559**************6 PP
   

   UBD/Beta-Prp
   S: 46   rslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshd.rtirv..wdletgqcleetlsghdgvvncv 143
           +s sg++  vta +f+++++il+t+ + ++i + ++ ++  vh l+  e ++ +++++ +gd+l++G    +t+++  w++++++ +   ++ h+  ++++
   Q: 267  SSGSGKSVDVTAARFHKETNILATAFNNGVIVLHEIPSFALVHNLRVSEMRIQTVAWNLTGDWLAIGCGKgSTAQLvvWEWQSESYVM-KQQAHSLRITTA 366
           333777777**********************************************************66514444467*********9.9*********** PP
   S: 144  vvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnght.dnvksvrfspnderlvsgs 241
           +++pdg+l+++G+ D++v++W++++ ++  t+ + ht+ v+ ++++++g+ ++s+sldgtv+  dl++ +  rtl + + ++   +++++ +++++ g+
   Q: 367  EYSPDGSLMATGAEDGKVKIWNSRSSFCTVTFDE-HTSGVTAVKWTQSGRAILSASLDGTVRAHDLKRYRNFRTLVCPEpTQLATLAVDKAGDLVIAGA 464
           ********************************99.*********************************999***9997746666777777777777766 PP
   
Organism Caenorhabditis elegans
Protein Sequence
(Fasta)
MDTNFKLSNC IGTVYRDGQV AFSKDGYSVI SPIGNKLSIF DLRNNTSKTL DIDCNYNIKR 60
LSISPSGYHL LASDERGVVH FVHLLSEFKI YTFRSNKPIG SLQWSPDATR VAICRENDLQ 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Cel-018690|E3,WD_repeat;UBD,Beta-Prp|Caenorhabditis elegans
Please wait for a moment...
Nucleotide Sequence
(Fasta)
ATATTTTAGT TTTCATTATT TCTTCCATTT TCAGCTTGTT TCATTGAAGT CTTGCCATTC 60
ACTATGGACA CTAATTTCAA GGTAATTATT TGAAGCGTTA ATTATTCAAT TAATATTCCA 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Cel-018690|E3,WD_repeat;UBD,Beta-Prp|Caenorhabditis elegans
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat
Interpro

IPR027145--PWP2
IPR011044--Quino_amine_DH_bsu
IPR007148--SSU_processome_Utp12
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
Pfam

PF04003--Utp12
PF00400--WD40
SMART

SM00320--WD40
Gene Ontology

GO:0034388--C:Pwp2p-containing subcomplex of 90S preribosome
GO:0032040--C:small-subunit processome
GO:0030515--F:snoRNA binding
GO:0000462--P:maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000028--P:ribosomal small subunit assembly
KEGG cel:CELE_F55F8.3
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Aml-001932 Ailuropoda melanoleuca 37.98 0.00e+00 645.00
IUUC-Atr-003033 Amborella trichopoda 29.69 3.00e-119 421.00
IUUC-Apl-003219 Anas platyrhynchos 39.82 0.00e+00 666.00
IUUC-Aca-004950 Anolis carolinensis 39.35 0.00e+00 652.00
IUUC-Aly-006213 Arabidopsis lyrata 31.56 4.00e-130 457.00
IUUC-Ath-006593 Arabidopsis thaliana 31.54 2.00e-129 455.00
IUUC-Ago-007916 Ashbya gossypii 33.84 3.00e-146 511.00
IUUC-Acl-008225 Aspergillus clavatus 36.79 7.00e-163 566.00
IUUC-Afl-008390 Aspergillus flavus 35.55 5.00e-155 540.00
IUUC-Afu-009039 Aspergillus fumigatus 36.59 8.00e-161 559.00
IUUC-Ani-009228 Aspergillus nidulans 33.71 7.00e-134 470.00
IUUC-Ang-009663 Aspergillus niger 36.57 2.00e-153 535.00
IUUC-Aor-009923 Aspergillus oryzae 35.55 5.00e-155 540.00
IUUC-Ate-010264 Aspergillus terreus 35.44 2.00e-155 541.00
IUUC-Ame-010790 Astyanax mexicanus 37.91 3.00e-77 280.00
IUUC-Bgr-012066 Blumeria graminis 34.40 6.00e-148 516.00
IUUC-Bta-012399 Bos taurus 38.32 7.00e-180 623.00
IUUC-Bci-013757 Botrytis cinerea 34.25 7.00e-147 513.00
IUUC-Bdi-015028 Brachypodium distachyon 32.96 2.00e-130 459.00
IUUC-Bol-016521 Brassica oleracea 32.41 8.00e-129 453.00
IUUC-Bra-017096 Brassica rapa 31.21 4.00e-129 454.00
IUUC-Cja-019229 Callithrix jacchus 38.44 0.00e+00 649.00
IUUC-Cfa-020504 Canis familiaris 37.81 0.00e+00 632.00
IUUC-Cpo-021574 Cavia porcellus 37.70 0.00e+00 649.00
IUUC-Cre-022756 Chlamydomonas reinhardtii 38.13 1.00e-111 396.00
IUUC-Csa-023436 Chlorocebus sabaeus 38.02 0.00e+00 630.00
IUUC-Cin-025397 Ciona intestinalis 38.89 5.00e-158 550.00
IUUC-Csv-026194 Ciona savignyi 41.67 5.00e-125 441.00
IUUC-Cgl-026684 Colletotrichum gloeosporioides 34.74 7.00e-148 516.00
IUUC-Cne-027031 Cryptococcus neoformans 35.67 2.00e-159 555.00
IUUC-Cme-027276 Cyanidioschyzon merolae 26.45 6.00e-78 284.00
IUUC-Dre-027514 Danio rerio 38.87 0.00e+00 633.00
IUUC-Dno-029191 Dasypus novemcinctus 37.92 3.00e-160 557.00
IUUC-Dor-030149 Dipodomys ordii 38.17 0.00e+00 649.00
IUUC-Dse-031260 Dothistroma septosporum 38.60 6.00e-118 416.00
IUUC-Dme-032043 Drosophila melanogaster 35.73 3.00e-170 590.00
IUUC-Ete-033102 Echinops telfairi 41.21 2.00e-132 465.00
IUUC-Eca-033223 Equus caballus 38.21 0.00e+00 652.00
IUUC-Fca-035795 Felis catus 36.88 2.00e-173 601.00
IUUC-Fal-036830 Ficedula albicollis 38.65 0.00e+00 653.00
IUUC-Fox-037835 Fusarium oxysporum 34.06 5.00e-145 507.00
IUUC-Fso-038324 Fusarium solani 34.62 5.00e-142 497.00
IUUC-Gmo-039355 Gadus morhua 37.77 4.00e-180 624.00
IUUC-Ggr-039840 Gaeumannomyces graminis 34.09 7.00e-135 473.00
IUUC-Gga-040907 Gallus gallus 42.99 5.00e-130 456.00
IUUC-Gac-042624 Gasterosteus aculeatus 38.76 0.00e+00 631.00
IUUC-Gma-043034 Glycine max 32.75 5.00e-142 497.00
IUUC-Hsa-046145 Homo sapiens 38.13 0.00e+00 651.00
IUUC-Hvu-047416 Hordeum vulgare 32.63 2.00e-129 455.00
IUUC-Itr-049083 Ictidomys tridecemlineatus 38.80 0.00e+00 645.00
IUUC-Kpa-049150 Komagataella pastoris 33.79 4.00e-143 501.00
IUUC-Lch-049460 Latimeria chalumnae 35.18 1.00e-151 528.00
IUUC-Lpe-050840 Leersia perrieri 31.73 1.00e-128 452.00
IUUC-Loc-052733 Lepisosteus oculatus 38.18 0.00e+00 633.00
IUUC-Lma-053277 Leptosphaeria maculans 34.63 1.00e-150 525.00
IUUC-Laf-054294 Loxodonta africana 39.59 0.00e+00 632.00
IUUC-Mcc-054624 Macaca mulatta 38.13 0.00e+00 652.00
IUUC-Meu-056665 Macropus eugenii 34.62 1.00e-117 416.00
IUUC-Mor-057288 Magnaporthe oryzae 33.41 2.00e-142 498.00
IUUC-Mpo-057594 Magnaporthe poae 33.64 2.00e-135 475.00
IUUC-Mtr-058700 Medicago truncatula 34.05 5.00e-147 513.00
IUUC-Mla-058846 Melampsora laricipopulina 34.71 5.00e-143 500.00
IUUC-Mga-059207 Meleagris gallopavo 35.63 2.00e-159 555.00
IUUC-Mvi-060327 Microbotryum violaceum 35.09 1.00e-153 535.00
IUUC-Mmr-061264 Microcebus murinus 37.93 3.00e-179 620.00
IUUC-Mdo-062327 Monodelphis domestica 38.35 0.00e+00 653.00
IUUC-Mmu-063542 Mus musculus 37.79 0.00e+00 628.00
IUUC-Mac-065142 Musa acuminata 32.79 1.00e-135 476.00
IUUC-Mpu-066098 Mustela putorius furo 38.87 4.00e-163 567.00
IUUC-Mlu-067056 Myotis lucifugus 34.97 8.00e-151 526.00
IUUC-Nfi-068323 Neosartorya fischeri 36.57 1.00e-161 562.00
IUUC-Ncr-068925 Neurospora crassa 34.86 8.00e-158 549.00
IUUC-Nle-068970 Nomascus leucogenys 38.02 0.00e+00 644.00
IUUC-Opr-070966 Ochotona princeps 48.90 2.00e-89 321.00
IUUC-Ont-071252 Oreochromis niloticus 37.92 1.00e-176 612.00
IUUC-Oan-072737 Ornithorhynchus anatinus 37.36 5.00e-177 613.00
IUUC-Oba-075794 Oryza barthii 31.58 5.00e-124 437.00
IUUC-Obr-076617 Oryza brachyantha 32.27 2.00e-131 461.00
IUUC-Ogl-077022 Oryza glaberrima 32.37 3.00e-133 468.00
IUUC-Ogu-078757 Oryza glumaepatula 26.44 3.00e-79 288.00
IUUC-Oin-079813 Oryza indica 32.67 6.00e-135 473.00
IUUC-Olo-080265 Oryza longistaminata 32.38 4.00e-132 464.00
IUUC-Ome-081494 Oryza meridionalis 32.45 1.00e-133 469.00
IUUC-Oni-082639 Oryza nivara 26.33 2.00e-78 286.00
IUUC-Opu-084005 Oryza punctata 32.60 2.00e-132 465.00
IUUC-Oru-084883 Oryza rufipogon 26.44 4.00e-79 288.00
IUUC-Osa-086158 Oryza sativa 32.67 1.00e-133 469.00
IUUC-Ola-086822 Oryzias latipes 38.97 0.00e+00 633.00
IUUC-Olu-087741 Ostreococcus lucimarinus 30.37 2.00e-17 80.50
IUUC-Oga-088887 Otolemur garnettii 38.57 8.00e-180 622.00
IUUC-Oar-090110 Ovis aries 37.89 8.00e-173 599.00
IUUC-Pan-092808 Papio anubis 38.53 0.00e+00 660.00
IUUC-Psi-093954 Pelodiscus sinensis 38.58 0.00e+00 652.00
IUUC-Pno-094922 Phaeosphaeria nodorum 36.12 8.00e-158 549.00
IUUC-Ppa-095678 Physcomitrella patens 33.49 8.00e-126 443.00
IUUC-Pfo-097175 Poecilia formosa 39.09 0.00e+00 652.00
IUUC-Pab-098155 Pongo abelii 37.92 0.00e+00 650.00
IUUC-Pop-099635 Populus trichocarpa 33.33 9.00e-138 483.00
IUUC-Pca-100947 Procavia capensis 36.76 4.00e-169 587.00
IUUC-Ppe-101552 Prunus persica 32.85 2.00e-143 502.00
IUUC-Pva-102744 Pteropus vampyrus 35.91 3.00e-159 554.00
IUUC-Pgr-103389 Puccinia graminis 34.73 5.00e-147 513.00
IUUC-Ptt-103953 Puccinia triticina 30.18 2.00e-103 369.00
IUUC-Pte-104079 Pyrenophora teres 35.21 3.00e-148 518.00
IUUC-Pyt-104656 Pyrenophora triticirepentis 35.21 7.00e-149 520.00
IUUC-Rno-105502 Rattus norvegicus 38.15 0.00e+00 654.00
IUUC-Sce-106390 Saccharomyces cerevisiae 34.10 1.00e-154 539.00
IUUC-Sha-107264 Sarcophilus harrisii 35.64 2.00e-67 248.00
IUUC-Sja-107674 Schizosaccharomyces japonicus 34.02 2.00e-158 551.00
IUUC-Spo-108348 Schizosaccharomyces pombe 33.22 4.00e-155 540.00
IUUC-Smo-108982 Selaginella moellendorffii 33.30 1.00e-140 492.00
IUUC-Sit-110304 Setaria italica 33.00 1.00e-138 486.00
IUUC-Sly-111620 Solanum lycopersicum 37.94 8.00e-113 399.00
IUUC-Stu-112877 Solanum tuberosum 32.74 2.00e-142 498.00
IUUC-Sbi-114702 Sorghum bicolor 32.67 4.00e-137 481.00
IUUC-Sre-115129 Sporisorium reilianum 33.30 5.00e-146 510.00
IUUC-Ssc-115931 Sus scrofa 35.20 5.00e-74 270.00
IUUC-Tgu-116787 Taeniopygia guttata 38.99 0.00e+00 656.00
IUUC-Tru-118218 Takifugu rubripes 39.59 0.00e+00 634.00
IUUC-Tsy-119401 Tarsius syrichta 38.97 8.00e-101 360.00
IUUC-Tni-120046 Tetraodon nigroviridis 38.71 3.00e-173 601.00
IUUC-Tca-121685 Theobroma cacao 32.52 6.00e-145 506.00
IUUC-Tre-122154 Trichoderma reesei 35.27 2.00e-151 528.00
IUUC-Tvi-122451 Trichoderma virens 34.36 6.00e-149 520.00
IUUC-Tae-125397 Triticum aestivum 34.42 6.00e-79 287.00
IUUC-Tur-126650 Triticum urartu 32.17 6.00e-120 423.00
IUUC-Tme-127005 Tuber melanosporum 34.36 4.00e-147 514.00
IUUC-Tbe-128102 Tupaia belangeri 39.51 6.00e-108 384.00
IUUC-Ttr-128259 Tursiops truncatus 39.45 1.00e-180 625.00
IUUC-Uma-129511 Ustilago maydis 33.90 7.00e-144 503.00
IUUC-Vda-129833 Verticillium dahliae 31.91 2.00e-131 461.00
IUUC-Vvi-131572 Vitis vinifera 33.98 2.00e-142 498.00
IUUC-Xtr-131776 Xenopus tropicalis 29.67 1.00e-42 166.00
IUUC-Xma-133887 Xiphophorus maculatus 39.09 2.00e-179 622.00
IUUC-Yli-134427 Yarrowia lipolytica 33.56 4.00e-150 524.00
IUUC-Zma-135980 Zea mays 32.52 5.00e-134 470.00
Created Date 25-Jun-2017

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