iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Gga-040907

UUCD1 version

UUC-GaG-00016

Ensembl Protein ID

ENSGALP00000035895.3

UniProt Accession

F1NAV7; F1NAV7_CHICK

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSGALG00000022802.4	ENSGALT00000036684.4	ENSGALP00000035895.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.00e-28	96.6	153	184
UBD/Beta-Prp	1.80e-45	155.8	4	239

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDl 30
           gH++++++l+f +  + l+sGs+D+t+k+WD+
   Q: 153  GHEGPISSLSFnPMkCVLASGSWDKTVKLWDM 184
           8**********988999**************6 PP

UBD/Beta-Prp

   S: 27   tgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshd 115
           tg   g + vw++++++++ + +gh +   ++ +spdg+++vtg+eD+ +kvw+ s++ c++t++ h++ v++++f  sg++++s+s d
   Q: 4    TGL--GQLLVWEWQSESYVLKQQGHFNSMVSLAYSPDGQYIVTGGEDGKVKVWNTSSSFCFVTFTDHSSGVTAVTFTSSGYVILSASLD 90
           555..6778******************************************************************************** PP
   S: 116  rtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrt.vrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgt 203
            t+r +dl+ +  ++++ s++ +  +c++v+++g ++ +Gs D++ + +W++++g+ll+ l+g h++++ slsf++ +  l+sgs d+t
   Q: 91   GTVRAFDLHRYRNFRTFTSPRPSQFSCLAVDSSGEIVSAGSQDSFeIFIWSMQSGRLLDVLSG-HEGPISSLSFNPMKCVLASGSWDKT 178
           *******************************************965****************9.*************9*********** PP
   S: 204  vklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktlqlhn 264
           vklwd+  +   ++    ++ v++v+f p+++ l+++s  g+i +Wd ++   ++++++++
   Q: 179  VKLWDMLDSWRTKETLMLNSDVLVVAFRPDGKELAVASLNGQITFWDHENAVQVGSIEGRH 239
           ******9887788888899****************************99999888888887 PP

Organism

Gallus gallus

Protein Sequence
(Fasta)

MCFTGLGQLL VWEWQSESYV LKQQGHFNSM VSLAYSPDGQ YIVTGGEDGK VKVWNTSSSF 60
CFVTFTDHSS GVTAVTFTSS GYVILSASLD GTVRAFDLHR YRNFRTFTSP RPSQFSCLAV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTGTTTCA CAGGTTTGGG TCAGCTCCTG GTGTGGGAAT GGCAGAGCGA GTCCTACGTG 60
CTGAAGCAGC AGGGCCATTT CAACAGCATG GTTTCGTTGG CTTATTCTCC AGATGGGCAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR001480--Bulb-type_lectin_dom
IPR020472--G-protein_beta_WD-40_rep
IPR027145--PWP2
IPR011047--Quinoprotein_ADH-like_supfam
IPR007148--SSU_processome_Utp12
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50927--BULB_LECTIN
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04003--Utp12
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0034388--C:Pwp2p-containing subcomplex of 90S preribosome
GO:0032040--C:small-subunit processome
GO:0030515--F:snoRNA binding
GO:0000462--P:maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000028--P:ribosomal small subunit assembly

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001932	Ailuropoda melanoleuca	77.68	0.00e+00	925.00
IUUC-Atr-003033	Amborella trichopoda	47.68	2.00e-148	520.00
IUUC-Apl-003219	Anas platyrhynchos	95.04	0.00e+00	1092.00
IUUC-Aca-004950	Anolis carolinensis	86.06	0.00e+00	969.00
IUUC-Aly-006213	Arabidopsis lyrata	46.01	5.00e-138	485.00
IUUC-Ath-006593	Arabidopsis thaliana	45.83	9.00e-138	484.00
IUUC-Ago-007916	Ashbya gossypii	48.55	2.00e-147	516.00
IUUC-Acl-008225	Aspergillus clavatus	51.17	2.00e-163	569.00
IUUC-Afl-008390	Aspergillus flavus	50.00	4.00e-162	565.00
IUUC-Afu-009039	Aspergillus fumigatus	52.78	3.00e-166	578.00
IUUC-Ani-009228	Aspergillus nidulans	45.23	9.00e-133	467.00
IUUC-Ang-009663	Aspergillus niger	49.65	3.00e-154	538.00
IUUC-Aor-009923	Aspergillus oryzae	50.00	4.00e-162	565.00
IUUC-Ate-010264	Aspergillus terreus	51.67	4.00e-162	565.00
IUUC-Ame-011648	Astyanax mexicanus	73.12	2.00e-38	149.00
IUUC-Bgr-012066	Blumeria graminis	48.29	1.00e-150	526.00
IUUC-Bta-012399	Bos taurus	79.81	0.00e+00	884.00
IUUC-Bci-013757	Botrytis cinerea	50.47	5.00e-150	525.00
IUUC-Bdi-015028	Brachypodium distachyon	47.74	3.00e-150	525.00
IUUC-Bol-016521	Brassica oleracea	46.27	1.00e-136	480.00
IUUC-Bra-017096	Brassica rapa	45.90	1.00e-137	483.00
IUUC-Cel-018690	Caenorhabditis elegans	45.05	2.00e-126	446.00
IUUC-Cja-019229	Callithrix jacchus	79.18	0.00e+00	918.00
IUUC-Cfa-020504	Canis familiaris	78.06	0.00e+00	918.00
IUUC-Cpo-021574	Cavia porcellus	77.88	0.00e+00	916.00
IUUC-Cre-022756	Chlamydomonas reinhardtii	44.27	8.00e-136	478.00
IUUC-Csa-023436	Chlorocebus sabaeus	79.37	0.00e+00	900.00
IUUC-Cin-025397	Ciona intestinalis	63.64	1.00e-144	506.00
IUUC-Csv-026194	Ciona savignyi	59.34	0.00e+00	647.00
IUUC-Cgl-026684	Colletotrichum gloeosporioides	49.25	9.00e-149	520.00
IUUC-Cne-027031	Cryptococcus neoformans	49.15	1.00e-157	550.00
IUUC-Cme-027276	Cyanidioschyzon merolae	33.01	2.00e-76	280.00
IUUC-Dre-027514	Danio rerio	70.85	0.00e+00	842.00
IUUC-Dno-029191	Dasypus novemcinctus	77.01	0.00e+00	895.00
IUUC-Dor-030149	Dipodomys ordii	75.51	0.00e+00	886.00
IUUC-Dse-031260	Dothistroma septosporum	49.72	2.00e-155	542.00
IUUC-Dme-032043	Drosophila melanogaster	49.91	4.00e-160	558.00
IUUC-Ete-033102	Echinops telfairi	81.03	0.00e+00	780.00
IUUC-Eca-033223	Equus caballus	80.30	0.00e+00	926.00
IUUC-Fca-035795	Felis catus	76.54	0.00e+00	875.00
IUUC-Fal-036830	Ficedula albicollis	91.33	0.00e+00	1054.00
IUUC-Fox-037835	Fusarium oxysporum	47.58	7.00e-151	527.00
IUUC-Fso-038324	Fusarium solani	49.34	2.00e-149	523.00
IUUC-Gmo-039355	Gadus morhua	74.30	0.00e+00	867.00
IUUC-Ggr-039840	Gaeumannomyces graminis	48.43	7.00e-139	488.00
IUUC-Gac-042624	Gasterosteus aculeatus	72.44	0.00e+00	824.00
IUUC-Gma-043034	Glycine max	47.55	1.00e-150	527.00
IUUC-Hsa-046145	Homo sapiens	79.81	0.00e+00	924.00
IUUC-Hvu-047416	Hordeum vulgare	47.18	2.00e-148	519.00
IUUC-Itr-049083	Ictidomys tridecemlineatus	76.53	0.00e+00	917.00
IUUC-Kpa-049150	Komagataella pastoris	46.49	5.00e-143	501.00
IUUC-Lch-049460	Latimeria chalumnae	78.79	0.00e+00	862.00
IUUC-Lpe-050840	Leersia perrieri	48.30	1.00e-152	533.00
IUUC-Loc-052733	Lepisosteus oculatus	73.18	0.00e+00	877.00
IUUC-Lma-053277	Leptosphaeria maculans	51.42	2.00e-154	539.00
IUUC-Laf-054294	Loxodonta africana	80.12	0.00e+00	854.00
IUUC-Mcc-054624	Macaca mulatta	80.00	0.00e+00	928.00
IUUC-Meu-056665	Macropus eugenii	65.10	2.00e-125	442.00
IUUC-Mor-057288	Magnaporthe oryzae	47.71	4.00e-147	515.00
IUUC-Mpo-057594	Magnaporthe poae	48.97	2.00e-139	489.00
IUUC-Mtr-058700	Medicago truncatula	49.16	2.00e-154	539.00
IUUC-Mla-058846	Melampsora laricipopulina	50.91	2.00e-155	543.00
IUUC-Mga-059207	Meleagris gallopavo	77.86	0.00e+00	817.00
IUUC-Mvi-060327	Microbotryum violaceum	52.08	4.00e-162	565.00
IUUC-Mmr-061264	Microcebus murinus	79.25	0.00e+00	920.00
IUUC-Mdo-062327	Monodelphis domestica	79.57	0.00e+00	923.00
IUUC-Mmu-063542	Mus musculus	78.07	0.00e+00	882.00
IUUC-Mac-065142	Musa acuminata	47.67	1.00e-148	520.00
IUUC-Mpu-066098	Mustela putorius furo	78.25	0.00e+00	912.00
IUUC-Mlu-067056	Myotis lucifugus	69.62	0.00e+00	768.00
IUUC-Nfi-068323	Neosartorya fischeri	52.59	3.00e-166	578.00
IUUC-Ncr-068925	Neurospora crassa	49.05	1.00e-155	543.00
IUUC-Nle-068970	Nomascus leucogenys	79.25	0.00e+00	913.00
IUUC-Opr-070966	Ochotona princeps	84.38	3.00e-131	461.00
IUUC-Ont-071252	Oreochromis niloticus	74.16	0.00e+00	835.00
IUUC-Oan-072737	Ornithorhynchus anatinus	80.84	0.00e+00	927.00
IUUC-Oba-075794	Oryza barthii	46.43	5.00e-142	498.00
IUUC-Obr-076617	Oryza brachyantha	47.55	2.00e-151	530.00
IUUC-Ogl-077022	Oryza glaberrima	48.30	1.00e-152	533.00
IUUC-Ogu-078757	Oryza glumaepatula	36.88	8.00e-103	367.00
IUUC-Oin-079813	Oryza indica	47.92	4.00e-151	528.00
IUUC-Olo-080265	Oryza longistaminata	48.30	1.00e-152	533.00
IUUC-Ome-081494	Oryza meridionalis	48.11	2.00e-151	529.00
IUUC-Oni-082639	Oryza nivara	36.69	1.00e-101	363.00
IUUC-Opu-084005	Oryza punctata	48.49	4.00e-153	535.00
IUUC-Oru-084883	Oryza rufipogon	36.69	2.00e-102	366.00
IUUC-Osa-086158	Oryza sativa	48.11	5.00e-152	531.00
IUUC-Ola-086822	Oryzias latipes	72.15	0.00e+00	832.00
IUUC-Olu-087741	Ostreococcus lucimarinus	35.94	7.00e-24	102.00
IUUC-Oga-088887	Otolemur garnettii	79.81	0.00e+00	891.00
IUUC-Oar-090110	Ovis aries	79.37	0.00e+00	884.00
IUUC-Pan-092808	Papio anubis	80.00	0.00e+00	928.00
IUUC-Psi-093954	Pelodiscus sinensis	87.97	0.00e+00	1012.00
IUUC-Pno-094922	Phaeosphaeria nodorum	51.61	5.00e-160	558.00
IUUC-Ppa-095678	Physcomitrella patens	48.20	7.00e-131	461.00
IUUC-Pfo-097175	Poecilia formosa	73.36	0.00e+00	854.00
IUUC-Pab-098155	Pongo abelii	79.25	0.00e+00	924.00
IUUC-Pop-099635	Populus trichocarpa	47.32	2.00e-148	519.00
IUUC-Pca-100947	Procavia capensis	72.86	0.00e+00	822.00
IUUC-Ppe-101552	Prunus persica	47.58	3.00e-153	535.00
IUUC-Pva-102744	Pteropus vampyrus	76.14	0.00e+00	866.00
IUUC-Pgr-103389	Puccinia graminis	52.82	5.00e-159	555.00
IUUC-Ptt-103953	Puccinia triticina	49.32	2.00e-140	493.00
IUUC-Pte-104079	Pyrenophora teres	51.61	4.00e-156	545.00
IUUC-Pyt-104656	Pyrenophora triticirepentis	51.99	2.00e-156	545.00
IUUC-Rno-105502	Rattus norvegicus	78.44	0.00e+00	916.00
IUUC-Sce-106390	Saccharomyces cerevisiae	49.24	5.00e-151	528.00
IUUC-Sha-107264	Sarcophilus harrisii	72.71	0.00e+00	628.00
IUUC-Sja-107674	Schizosaccharomyces japonicus	50.00	2.00e-157	549.00
IUUC-Spo-108348	Schizosaccharomyces pombe	50.76	2.00e-148	520.00
IUUC-Smo-108982	Selaginella moellendorffii	49.25	6.00e-146	511.00
IUUC-Sit-110304	Setaria italica	48.30	2.00e-156	546.00
IUUC-Sly-111620	Solanum lycopersicum	49.26	5.00e-159	554.00
IUUC-Stu-112877	Solanum tuberosum	49.26	7.00e-158	551.00
IUUC-Sbi-114702	Sorghum bicolor	49.06	1.00e-159	556.00
IUUC-Sre-115129	Sporisorium reilianum	44.65	2.00e-140	492.00
IUUC-Ssc-115931	Sus scrofa	74.43	0.00e+00	635.00
IUUC-Tgu-116787	Taeniopygia guttata	93.08	0.00e+00	1042.00
IUUC-Tru-118218	Takifugu rubripes	70.63	0.00e+00	813.00
IUUC-Tsy-119401	Tarsius syrichta	76.75	0.00e+00	790.00
IUUC-Tni-120046	Tetraodon nigroviridis	69.22	0.00e+00	772.00
IUUC-Tca-121685	Theobroma cacao	48.98	3.00e-157	548.00
IUUC-Tre-122154	Trichoderma reesei	49.15	5.00e-154	538.00
IUUC-Tvi-122451	Trichoderma virens	47.67	4.00e-151	528.00
IUUC-Tae-125397	Triticum aestivum	45.15	2.00e-126	446.00
IUUC-Tur-126650	Triticum urartu	47.18	3.00e-151	529.00
IUUC-Tme-127005	Tuber melanosporum	53.20	2.00e-159	556.00
IUUC-Tbe-128102	Tupaia belangeri	81.64	3.00e-129	456.00
IUUC-Ttr-128259	Tursiops truncatus	78.91	0.00e+00	823.00
IUUC-Uma-129511	Ustilago maydis	47.08	2.00e-137	483.00
IUUC-Vda-129833	Verticillium dahliae	45.52	1.00e-132	467.00
IUUC-Vvi-131572	Vitis vinifera	49.71	2.00e-156	545.00
IUUC-Xtr-131776	Xenopus tropicalis	55.61	6.00e-121	427.00
IUUC-Xma-133887	Xiphophorus maculatus	73.92	0.00e+00	807.00
IUUC-Yli-134427	Yarrowia lipolytica	51.98	4.00e-164	571.00
IUUC-Zma-135980	Zea mays	49.25	3.00e-159	555.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence