iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Yli-134427

Ensembl Protein ID

CAG82586

UniProt Accession

Q6CG40; Q6CG40_YARLI

Genbank Protein ID

CAG82586.1

Protein Name

YALI0B01078p

Genbank Nucleotide ID

CR382128

Gene Name

YALI0_B01078g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
YALI0_B01078g	CAG82586	CAG82586

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.80e-35	116.8	454	487
UBD/Beta-Prp	1.60e-70	236.0	241	464

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf....sd.tllvsGsdDgtikvWD 29
           gH+++v+cl+f     +  +l+s+s+D+t++vW+
   Q: 454  GHEGPVSCLSFgaeiANaSILASASWDHTVRVWN 487
           8**************5558**************9 PP

UBD/Beta-Prp

   S: 8    hhksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseD.rtikvwdlstgkcvhtlkghedsvlslsfspsgd 107
           h++sv++c +f+ ++++l++g+++gt   +++ +++ ++++s  + ++  v+++++g++++ g++  + + vw+ ++ +++ + +gh ds  sl +sp+g+
   Q: 241  HQQSVLKCSAFHAKSNILVVGFANGTFAMYELPSMTQIQTMSVSQHGIDFVTINSTGEWMALGASKlGQLLVWEWQSESYILKQQGHFDSMNSLVYSPDGS 341
           899*******************************************************888888888********************************** PP
   S: 108  klvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldg.tvklw 207
           k+v++s+d  i++wd+++g cl  t+++h+++v+ ++++ +gn+l+s+slD+ vr Wdl + +  rt+      +  sl++d++g+ + +gsld+ ++ +w
   Q: 342  KVVTASEDGKIKLWDTSSGFCLV-TFTEHSAAVTALEFSRKGNVLFSASLDGSVRAWDLIRYRNFRTFAAPERIQFSSLAVDPSGEVVCAGSLDNfDIYVW 441
           ***********************.********************************************987888889999*************9967**** PP
   S: 208  dlqtgecvrtlnghtdnvksvrf 230
           ++qt++ ++tl gh+ +v+++ f
   Q: 442  SVQTSQLLDTLAGHEGPVSCLSF 464
           ********************987 PP

Organism

Yarrowia lipolytica

Protein Sequence
(Fasta)

MKADYKFSNL LGTVYRQGNL VFTPDGTALL SPVGNRVSYF DLVKNTSFTF PYEHRRNITC 60
IALNAQGSLM LTVSDDGKAI LVNFKRRTVI HHFNFRDVVS DVQFSPDSQY FAINIGARLE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAAGGCGG ACTACAAATT TTCGAATCTG TTGGGGACCG TGTATCGGCA GGGAAACCTG 60
GTGTTTACGC CTGACGGCAC GGCGCTGCTT TCGCCGGTGG GCAACCGGGT GTCGTATTTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR027145--PWP2
IPR011047--Quinoprotein_ADH-like_supfam
IPR007148--SSU_processome_Utp12
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04003--Utp12
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005829--C:cytosol
GO:0034388--C:Pwp2p-containing subcomplex of 90S preribosome
GO:0032040--C:small-subunit processome
GO:0030515--F:snoRNA binding
GO:0000920--P:cell separation after cytokinesis
GO:0000480--P:endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000447--P:endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000472--P:endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0030010--P:establishment of cell polarity
GO:0000462--P:maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000028--P:ribosomal small subunit assembly

KEGG

yli:YALI0B01078g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001932	Ailuropoda melanoleuca	43.86	0.00e+00	751.00
IUUC-Atr-003033	Amborella trichopoda	46.04	9.00e-163	565.00
IUUC-Apl-003219	Anas platyrhynchos	45.78	0.00e+00	772.00
IUUC-Aca-004950	Anolis carolinensis	43.54	0.00e+00	739.00
IUUC-Aly-006213	Arabidopsis lyrata	40.53	0.00e+00	644.00
IUUC-Ath-006593	Arabidopsis thaliana	46.13	4.00e-152	530.00
IUUC-Ago-007916	Ashbya gossypii	59.05	0.00e+00	1026.00
IUUC-Acl-008225	Aspergillus clavatus	55.66	0.00e+00	999.00
IUUC-Afl-008390	Aspergillus flavus	56.73	0.00e+00	1016.00
IUUC-Afu-009039	Aspergillus fumigatus	56.54	0.00e+00	1004.00
IUUC-Ani-009228	Aspergillus nidulans	50.93	0.00e+00	876.00
IUUC-Ang-009663	Aspergillus niger	56.38	0.00e+00	979.00
IUUC-Aor-009923	Aspergillus oryzae	56.73	0.00e+00	1016.00
IUUC-Ate-010264	Aspergillus terreus	55.89	0.00e+00	1004.00
IUUC-Ame-010790	Astyanax mexicanus	42.86	1.00e-46	178.00
IUUC-Bgr-012066	Blumeria graminis	53.53	0.00e+00	981.00
IUUC-Bta-012399	Bos taurus	43.98	0.00e+00	733.00
IUUC-Bci-013757	Botrytis cinerea	56.71	0.00e+00	984.00
IUUC-Bdi-015028	Brachypodium distachyon	40.72	0.00e+00	671.00
IUUC-Bol-016521	Brassica oleracea	40.09	0.00e+00	643.00
IUUC-Bra-017096	Brassica rapa	39.93	0.00e+00	649.00
IUUC-Cel-018690	Caenorhabditis elegans	34.21	2.00e-147	514.00
IUUC-Cja-019229	Callithrix jacchus	44.82	0.00e+00	761.00
IUUC-Cfa-020504	Canis familiaris	46.75	1.00e-173	601.00
IUUC-Cpo-021574	Cavia porcellus	45.00	0.00e+00	768.00
IUUC-Cre-022756	Chlamydomonas reinhardtii	47.56	1.00e-151	528.00
IUUC-Csa-023436	Chlorocebus sabaeus	49.42	1.00e-170	591.00
IUUC-Cin-025397	Ciona intestinalis	41.97	8.00e-163	565.00
IUUC-Csv-026194	Ciona savignyi	47.99	2.00e-145	507.00
IUUC-Cgl-026684	Colletotrichum gloeosporioides	56.47	0.00e+00	984.00
IUUC-Cne-027031	Cryptococcus neoformans	48.49	0.00e+00	906.00
IUUC-Cme-027276	Cyanidioschyzon merolae	31.69	5.00e-77	280.00
IUUC-Dre-027514	Danio rerio	39.02	0.00e+00	644.00
IUUC-Dno-029191	Dasypus novemcinctus	47.18	5.00e-169	585.00
IUUC-Dor-030149	Dipodomys ordii	44.43	0.00e+00	751.00
IUUC-Dse-031260	Dothistroma septosporum	55.31	0.00e+00	685.00
IUUC-Dme-032043	Drosophila melanogaster	42.95	2.00e-148	518.00
IUUC-Ete-033102	Echinops telfairi	50.95	4.00e-156	543.00
IUUC-Eca-033223	Equus caballus	47.89	7.00e-176	608.00
IUUC-Fca-035795	Felis catus	41.99	0.00e+00	696.00
IUUC-Fal-036830	Ficedula albicollis	49.50	1.00e-179	621.00
IUUC-Fox-037835	Fusarium oxysporum	54.98	0.00e+00	975.00
IUUC-Fso-038324	Fusarium solani	55.69	0.00e+00	978.00
IUUC-Gmo-039355	Gadus morhua	47.59	6.00e-172	595.00
IUUC-Ggr-039840	Gaeumannomyces graminis	55.02	0.00e+00	944.00
IUUC-Gga-040907	Gallus gallus	51.98	5.00e-165	572.00
IUUC-Gac-042624	Gasterosteus aculeatus	48.25	6.00e-170	589.00
IUUC-Gma-043034	Glycine max	46.39	1.00e-166	578.00
IUUC-Hsa-046145	Homo sapiens	44.61	0.00e+00	766.00
IUUC-Hvu-047416	Hordeum vulgare	40.66	0.00e+00	677.00
IUUC-Itr-049083	Ictidomys tridecemlineatus	44.84	0.00e+00	767.00
IUUC-Kpa-049150	Komagataella pastoris	56.69	0.00e+00	1031.00
IUUC-Lch-049460	Latimeria chalumnae	39.88	2.00e-157	547.00
IUUC-Lpe-050840	Leersia perrieri	46.25	4.00e-166	576.00
IUUC-Loc-052733	Lepisosteus oculatus	43.15	0.00e+00	746.00
IUUC-Lma-053277	Leptosphaeria maculans	57.34	0.00e+00	1004.00
IUUC-Laf-054294	Loxodonta africana	44.98	0.00e+00	744.00
IUUC-Mcc-054624	Macaca mulatta	44.61	0.00e+00	765.00
IUUC-Meu-056665	Macropus eugenii	42.25	5.00e-89	320.00
IUUC-Mor-057288	Magnaporthe oryzae	55.42	0.00e+00	980.00
IUUC-Mpo-057594	Magnaporthe poae	55.40	0.00e+00	937.00
IUUC-Mtr-058700	Medicago truncatula	40.97	0.00e+00	693.00
IUUC-Mla-058846	Melampsora laricipopulina	46.92	0.00e+00	827.00
IUUC-Mga-059207	Meleagris gallopavo	37.33	3.00e-158	550.00
IUUC-Mvi-060327	Microbotryum violaceum	50.69	0.00e+00	900.00
IUUC-Mmr-061264	Microcebus murinus	44.94	0.00e+00	738.00
IUUC-Mdo-062327	Monodelphis domestica	45.01	0.00e+00	760.00
IUUC-Mmu-063542	Mus musculus	49.66	9.00e-170	588.00
IUUC-Mac-065142	Musa acuminata	41.60	0.00e+00	684.00
IUUC-Mpu-066098	Mustela putorius furo	43.94	0.00e+00	642.00
IUUC-Mlu-067056	Myotis lucifugus	41.05	0.00e+00	645.00
IUUC-Nfi-068323	Neosartorya fischeri	56.38	0.00e+00	1012.00
IUUC-Ncr-068925	Neurospora crassa	55.54	0.00e+00	1003.00
IUUC-Nle-068970	Nomascus leucogenys	44.38	0.00e+00	758.00
IUUC-Opr-070966	Ochotona princeps	55.84	8.00e-105	372.00
IUUC-Ont-071252	Oreochromis niloticus	47.19	4.00e-168	583.00
IUUC-Oan-072737	Ornithorhynchus anatinus	47.62	5.00e-169	586.00
IUUC-Oba-075794	Oryza barthii	44.66	2.00e-154	537.00
IUUC-Obr-076617	Oryza brachyantha	45.60	4.00e-164	569.00
IUUC-Ogl-077022	Oryza glaberrima	45.87	2.00e-165	574.00
IUUC-Ogu-078757	Oryza glumaepatula	38.20	3.00e-102	364.00
IUUC-Oin-079813	Oryza indica	38.80	4.00e-171	593.00
IUUC-Olo-080265	Oryza longistaminata	45.87	2.00e-165	574.00
IUUC-Ome-081494	Oryza meridionalis	45.54	2.00e-163	567.00
IUUC-Oni-082639	Oryza nivara	38.39	9.00e-103	365.00
IUUC-Opu-084005	Oryza punctata	46.03	4.00e-166	576.00
IUUC-Oru-084883	Oryza rufipogon	38.20	4.00e-102	363.00
IUUC-Osa-086158	Oryza sativa	45.87	7.00e-165	572.00
IUUC-Ola-086822	Oryzias latipes	43.95	0.00e+00	746.00
IUUC-Olu-087741	Ostreococcus lucimarinus	29.74	1.00e-20	90.10
IUUC-Oga-088887	Otolemur garnettii	44.72	0.00e+00	740.00
IUUC-Oar-090110	Ovis aries	42.19	0.00e+00	693.00
IUUC-Pan-092808	Papio anubis	45.45	0.00e+00	771.00
IUUC-Psi-093954	Pelodiscus sinensis	45.09	0.00e+00	760.00
IUUC-Pno-094922	Phaeosphaeria nodorum	57.67	0.00e+00	1023.00
IUUC-Ppa-095678	Physcomitrella patens	44.02	0.00e+00	677.00
IUUC-Pfo-097175	Poecilia formosa	47.36	2.00e-173	600.00
IUUC-Pab-098155	Pongo abelii	44.87	0.00e+00	769.00
IUUC-Pop-099635	Populus trichocarpa	40.71	0.00e+00	667.00
IUUC-Pca-100947	Procavia capensis	41.25	0.00e+00	681.00
IUUC-Ppe-101552	Prunus persica	48.60	3.00e-172	596.00
IUUC-Pva-102744	Pteropus vampyrus	40.56	0.00e+00	640.00
IUUC-Pgr-103389	Puccinia graminis	47.83	0.00e+00	830.00
IUUC-Ptt-103953	Puccinia triticina	40.09	0.00e+00	639.00
IUUC-Pte-104079	Pyrenophora teres	57.81	0.00e+00	1006.00
IUUC-Pyt-104656	Pyrenophora triticirepentis	57.58	0.00e+00	1003.00
IUUC-Rno-105502	Rattus norvegicus	49.83	1.00e-175	608.00
IUUC-Sce-106390	Saccharomyces cerevisiae	58.21	0.00e+00	1050.00
IUUC-Sha-107264	Sarcophilus harrisii	43.22	3.00e-92	329.00
IUUC-Sja-107674	Schizosaccharomyces japonicus	54.21	0.00e+00	998.00
IUUC-Spo-108348	Schizosaccharomyces pombe	52.96	0.00e+00	971.00
IUUC-Smo-109327	Selaginella moellendorffii	42.39	0.00e+00	701.00
IUUC-Sit-110304	Setaria italica	38.66	2.00e-176	610.00
IUUC-Sly-111620	Solanum lycopersicum	48.94	8.00e-159	551.00
IUUC-Stu-112877	Solanum tuberosum	47.95	2.00e-168	583.00
IUUC-Sbi-114702	Sorghum bicolor	41.42	0.00e+00	691.00
IUUC-Sre-115129	Sporisorium reilianum	47.70	0.00e+00	830.00
IUUC-Ssc-115931	Sus scrofa	45.22	4.00e-97	346.00
IUUC-Tgu-116787	Taeniopygia guttata	49.83	0.00e+00	626.00
IUUC-Tru-118218	Takifugu rubripes	43.36	0.00e+00	741.00
IUUC-Tsy-119401	Tarsius syrichta	47.38	3.00e-125	441.00
IUUC-Tni-120046	Tetraodon nigroviridis	43.61	0.00e+00	714.00
IUUC-Tca-121685	Theobroma cacao	41.59	0.00e+00	705.00
IUUC-Tre-122154	Trichoderma reesei	55.01	0.00e+00	987.00
IUUC-Tvi-122451	Trichoderma virens	55.24	0.00e+00	986.00
IUUC-Tae-125397	Triticum aestivum	44.99	8.00e-122	429.00
IUUC-Tur-126650	Triticum urartu	40.38	5.00e-177	612.00
IUUC-Tme-127005	Tuber melanosporum	58.55	0.00e+00	1031.00
IUUC-Tbe-128102	Tupaia belangeri	43.58	8.00e-125	439.00
IUUC-Ttr-128259	Tursiops truncatus	44.19	0.00e+00	722.00
IUUC-Uma-129511	Ustilago maydis	47.53	0.00e+00	809.00
IUUC-Vda-129833	Verticillium dahliae	51.84	0.00e+00	907.00
IUUC-Vvi-131572	Vitis vinifera	42.45	0.00e+00	660.00
IUUC-Xtr-131776	Xenopus tropicalis	33.51	6.00e-57	213.00
IUUC-Xma-133887	Xiphophorus maculatus	47.19	4.00e-166	576.00
IUUC-Zma-135980	Zea mays	45.99	8.00e-164	568.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence