iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Gma-044014

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000850

Gene Name

LOC100782712; GLYMA_17G118600

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GLYMA17G12770	GLYMA17G12770.1	GLYMA17G12770.1
GLYMA17G12770	GLYMA17G12770.3	GLYMA17G12770.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	6.80e-25	87.7	146	183
UBD/Beta-Prp	2.50e-43	150.0	28	216

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 4    dsvtclaf..sd.tllvsGsdDgtikvWDlrtgvllks 38
           +sv+ +a+  sd t+l+s++d g +++WD+r+g+ +++
   Q: 146  GSVRTVAWlhSDqTILSSCTDMGGVRLWDVRSGKIVQT 183
           68*******999666666666699*********99985 PP

UBD/Beta-Prp

   S: 19   spdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsG 112
           +pd+ +l+++s+d++  + + +tg+ + +++gh+++v++++++ ++   +t+s D   kvwd  tg+ +h+++ h++ +++++fs++++ l++G
   Q: 28   TPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTSALRAATASADFSTKVWDALTGDELHSFE-HKHIARACAFSEDTHLLLTG 120
           89999*****************************************9**************************.******************** PP
   S: 113  shdrtirvwdletgqcleetlsghdgvvncvvvhpdg.nllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvk 205
           +  +++r++d++         ++  g+v++v++  ++  +l s+++ + vrlWd+++gk+++tl+   ++sv+s +++++g+++ + ++ +tvk
   Q: 121  GVEKILRIYDMNRPDAPPREVDKSPGSVRTVAWLHSDqTILSSCTDMGGVRLWDVRSGKIVQTLET--KSSVTSAEVSQDGRYITT-ADGSTVK 211
           ***********9988777766666667766666555538888888889****************75..************977655.6789*** PP
   S: 206  lwdlq 210
           +wd  
   Q: 212  FWDAN 216
           ***75 PP

Organism

Glycine max

Protein Sequence
(Fasta)

MEKKKVAVPL VCHGHSRPVV DLFYSPVTPD GFFLISASKD SSPMLRNGET GDWIGTFEGH 60
KGAVWSCCLD TSALRAATAS ADFSTKVWDA LTGDELHSFE HKHIARACAF SEDTHLLLTG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTTAAAGCCA CCCAGCCAGA TCCAAATGAC TGCGTAAGAA GAAAACTGAG ATTGGCTACG 60
TGTAGGTGTT TGGAGTGGGG TCCACAATCC ACCATCTCCA TCCATTCCAT CCGAGAAACC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

KEGG

gmx:100782712

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000668	Aegilops tauschii	81.34	3.00e-168	583.00
IUUC-Aml-002091	Ailuropoda melanoleuca	48.52	2.00e-75	276.00
IUUC-Apl-003327	Anas platyrhynchos	49.04	1.00e-64	239.00
IUUC-Aca-005324	Anolis carolinensis	50.52	2.00e-77	282.00
IUUC-Cja-018740	Callithrix jacchus	48.36	6.00e-75	274.00
IUUC-Cfa-021145	Canis familiaris	50.86	2.00e-78	286.00
IUUC-Cpo-022373	Cavia porcellus	50.86	9.00e-79	286.00
IUUC-Csa-023098	Chlorocebus sabaeus	50.86	3.00e-78	285.00
IUUC-Cho-024856	Choloepus hoffmanni	45.36	2.00e-62	232.00
IUUC-Dre-028457	Danio rerio	52.05	2.00e-81	295.00
IUUC-Dno-029213	Dasypus novemcinctus	51.55	2.00e-79	289.00
IUUC-Dse-031350	Dothistroma septosporum	39.21	2.00e-56	213.00
IUUC-Ete-032558	Echinops telfairi	41.96	3.00e-47	181.00
IUUC-Fal-036706	Ficedula albicollis	48.54	8.00e-65	240.00
IUUC-Gmo-039707	Gadus morhua	50.00	7.00e-76	276.00
IUUC-Gga-040901	Gallus gallus	51.55	1.00e-78	286.00
IUUC-Hsa-046553	Homo sapiens	48.68	2.00e-75	276.00
IUUC-Hvu-047544	Hordeum vulgare	80.76	2.00e-168	584.00
IUUC-Itr-047980	Ictidomys tridecemlineatus	50.86	1.00e-78	286.00
IUUC-Lpe-051246	Leersia perrieri	81.45	5.00e-173	600.00
IUUC-Loc-052598	Lepisosteus oculatus	52.05	2.00e-80	292.00
IUUC-Mvi-060534	Microbotryum violaceum	33.79	1.00e-38	153.00
IUUC-Mmr-061044	Microcebus murinus	50.86	2.00e-78	285.00
IUUC-Mdo-063019	Monodelphis domestica	49.83	2.00e-76	279.00
IUUC-Mac-065617	Musa acuminata	85.42	1.00e-179	621.00
IUUC-Mpu-066557	Mustela putorius furo	50.86	1.00e-78	286.00
IUUC-Mlu-068179	Myotis lucifugus	50.86	4.00e-79	288.00
IUUC-Nle-069482	Nomascus leucogenys	48.36	8.00e-75	273.00
IUUC-Opr-071055	Ochotona princeps	39.86	6.00e-48	184.00
IUUC-Oga-088932	Otolemur garnettii	43.24	1.00e-49	190.00
IUUC-Ptr-091202	Pan troglodytes	50.86	2.00e-78	285.00
IUUC-Pan-091948	Papio anubis	50.86	2.00e-78	285.00
IUUC-Pma-094255	Petromyzon marinus	49.83	3.00e-74	271.00
IUUC-Pop-099753	Populus trichocarpa	85.10	0.00e+00	632.00
IUUC-Pca-100761	Procavia capensis	47.08	1.00e-68	253.00
IUUC-Sha-107568	Sarcophilus harrisii	49.83	3.00e-76	278.00
IUUC-Stu-111953	Solanum tuberosum	80.24	2.00e-164	572.00
IUUC-Sar-113491	Sorex araneus	44.39	3.00e-42	164.00
IUUC-Tsy-119522	Tarsius syrichta	49.14	6.00e-71	261.00
IUUC-Tae-123053	Triticum aestivum	81.34	5.00e-169	586.00
IUUC-Tbe-127324	Tupaia belangeri	35.80	8.00e-24	104.00
IUUC-Vpa-130382	Vicugna pacos	50.86	2.00e-78	286.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence