iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSMUSG00000055235.11	ENSMUST00000068693.11	ENSMUSP00000064785.5
ENSMUSG00000055235.11	ENSMUST00000127320.1	ENSMUSP00000119649.1

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress	GXD
DNA & RNA Element
microRNA	TRANSFAC	RepTar	RAID2
Post-translational Modifications (PTMs)
dbPAF	PhosphositePlus
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.40e-36	124.0	55	91
UBD/Beta-Prp	3.30e-70	237.7	163	282

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclafsdtllvsGsdDgtikvWDlrtgvllk 37
           gH++ vt +++ d    ++s D+ti+ WD+rtg +l+
   Q: 55   GHESYVTFCHLEDEAAFTCSADCTIRRWDVRTGQCLQ 91
           89*********44899*******************98 PP

UBD/Beta-Prp

   S: 106  gdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngke 194
           g  lv+Gs+d+t++vw++ +g c + tl+gh+g+v c+v+h ++   ++Gs+D tvr Wd+ +g+ lr +++ h++sv +l++++  + 
   Q: 163  GGLLVTGSSDDTAKVWQVASGCCHQ-TLRGHTGAVLCLVLHVSSHTAFTGSTDATVRAWDILSGEQLRVFRE-HQGSVICLELTD--RL 247
           5789999999999999999999999.9999999999999999999999999999999999999999999998.999999999999..89 PP
   S: 195  lvsgsldgtvklwdlqtgecvrtlnghtdnvksvr 229
           l sgs d+tvk w   tge v t+ +h+  v+ ++
   Q: 248  LYSGSADRTVKCWLADTGERVLTFPAHRHSVSALK 282
           99999999999999999999999999999998765 PP

Organism

Mus musculus

Protein Sequence
(Fasta)

MGSSGSALRV CADHRGGINW LSLSPDGQRL LTGSEDGTAR LWSTVDGQCC ALLQGHESYV 60
TFCHLEDEAA FTCSADCTIR RWDVRTGQCL QVYRGHTSIV NRILVANDQL FSSSYDRTAR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTGGGAGGGG ACAGGTTGGG GGGTGGTCTC TGAGGAGGAG CCAGGCTGGA TTGTATTGTT 60
CCGCGCTCCG CTTCTCGGGT TCTTCTACCG GCTTCAGACC TGGTGGGCTC CTCTGCGCAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

KEGG

mmu:269633

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001210	Ailuropoda melanoleuca	87.69	3.00e-95	340.00
IUUC-Apl-004074	Anas platyrhynchos	63.57	3.00e-98	351.00
IUUC-Aca-004913	Anolis carolinensis	67.80	2.00e-148	518.00
IUUC-Bta-013331	Bos taurus	84.51	0.00e+00	630.00
IUUC-Cja-019968	Callithrix jacchus	86.58	0.00e+00	661.00
IUUC-Cfa-020996	Canis familiaris	90.50	2.00e-126	446.00
IUUC-Cpo-021901	Cavia porcellus	82.87	7.00e-155	540.00
IUUC-Csa-023634	Chlorocebus sabaeus	88.84	4.00e-126	444.00
IUUC-Cho-024618	Choloepus hoffmanni	64.61	1.00e-82	299.00
IUUC-Dno-029991	Dasypus novemcinctus	80.10	2.00e-173	601.00
IUUC-Dor-031111	Dipodomys ordii	84.66	3.00e-150	524.00
IUUC-Ete-032821	Echinops telfairi	76.99	2.00e-44	171.00
IUUC-Eca-034385	Equus caballus	86.81	8.00e-119	420.00
IUUC-Fca-035672	Felis catus	86.25	2.00e-133	467.00
IUUC-Fal-036601	Ficedula albicollis	67.89	3.00e-150	524.00
IUUC-Gga-040454	Gallus gallus	69.07	9.00e-155	539.00
IUUC-Ggo-045560	Gorilla gorilla	87.45	5.00e-139	487.00
IUUC-Hsa-046859	Homo sapiens	90.08	3.00e-126	445.00
IUUC-Itr-048107	Ictidomys tridecemlineatus	73.68	8.00e-141	493.00
IUUC-Lch-049458	Latimeria chalumnae	59.73	4.00e-132	464.00
IUUC-Loc-052940	Lepisosteus oculatus	57.89	5.00e-129	454.00
IUUC-Laf-053931	Loxodonta africana	84.68	3.00e-169	587.00
IUUC-Mcc-055629	Macaca mulatta	87.72	2.00e-178	619.00
IUUC-Meu-056313	Macropus eugenii	72.87	7.00e-161	559.00
IUUC-Mga-059418	Meleagris gallopavo	61.48	8.00e-80	290.00
IUUC-Mmr-060958	Microcebus murinus	87.60	3.00e-123	434.00
IUUC-Mdo-061978	Monodelphis domestica	69.28	2.00e-133	469.00
IUUC-Mpu-066501	Mustela putorius furo	88.50	6.00e-147	513.00
IUUC-Mlu-067322	Myotis lucifugus	84.74	0.00e+00	637.00
IUUC-Nle-069571	Nomascus leucogenys	86.28	1.00e-154	540.00
IUUC-Opr-070837	Ochotona princeps	77.50	2.00e-47	181.00
IUUC-Oan-072939	Ornithorhynchus anatinus	65.35	6.00e-120	423.00
IUUC-Ocu-074607	Oryctolagus cuniculus	84.29	7.00e-173	599.00
IUUC-Oga-088689	Otolemur garnettii	90.35	0.00e+00	629.00
IUUC-Oar-089291	Ovis aries	75.26	6.00e-119	419.00
IUUC-Ptr-090482	Pan troglodytes	86.84	0.00e+00	642.00
IUUC-Pan-092460	Papio anubis	86.32	0.00e+00	634.00
IUUC-Psi-093758	Pelodiscus sinensis	67.89	4.00e-155	540.00
IUUC-Pma-094422	Petromyzon marinus	48.47	2.00e-79	288.00
IUUC-Pca-100969	Procavia capensis	66.67	1.00e-42	166.00
IUUC-Pva-102148	Pteropus vampyrus	79.69	7.00e-137	479.00
IUUC-Rno-106067	Rattus norvegicus	96.32	0.00e+00	746.00
IUUC-Sha-107050	Sarcophilus harrisii	67.80	9.00e-102	362.00
IUUC-Ssc-116247	Sus scrofa	83.69	2.00e-136	478.00
IUUC-Tgu-116656	Taeniopygia guttata	64.73	2.00e-97	348.00
IUUC-Tsy-118911	Tarsius syrichta	75.21	5.00e-101	360.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence