iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tre-122162

Ensembl Protein ID

EGR48419

UniProt Accession

G0RKD5; G0RKD5_HYPJQ

Genbank Protein ID

EGR48419.1

Protein Name

Predicted protein

Genbank Nucleotide ID

GL985065

Gene Name

TRIREDRAFT_122070

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TRIREDRAFT_122070	EGR48419	EGR48419

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.00e-24	84.5	266	303
UBD/Beta-Prp	1.00e-45	155.1	214	426

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvll 36
           gH+ s ++++f ++ t ++s+s+D  ik+WD+ +g ++
   Q: 266  GHSKSLSDICFnNSgTQFLSASYDRMIKLWDTEKGICI 303
           8**********9556****************9998875 PP

UBD/Beta-Prp

   S: 84   gkcvhtlkghedsvlslsfsp.sgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsv 183
            k++h +k h+  v++l+f+p sg+ l+s+++d t+r+ d+ ++ +l  t sgh+++ + ++++ +g  + s+s+Dr+++lWd + g ++ ++t g+t+ v
   Q: 214  KKQIHGWKDHSGAVTALRFFPkSGHLLLSAGADTTVRIRDVYHDRELLRTYSGHSKSLSDICFNNSGTQFLSASYDRMIKLWDTEKGICISRFTTGKTPHV 314
           689******************788***********************99********************************************99899999 PP
   S: 184  yslsfdsng.kelvsgsldgtvklwdlq.tgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktlqlhnssvisvavlsfgdnvlvl 282
            + + d++  +e+++g  d+++  +d++  +++v+++  h + ++ + f +n+ r++++s+D+s+r Wd+    ++k ++ +    +  a+l++++++++ 
   Q: 315  IKFNPDPEHsNEFLAGMSDKKIVQFDIRtPNQVVQEYDHHLAAINTITFVDNNRRFMTTSDDKSLRAWDYNIPVPIKYIAEPDMYPMTRAALHPSGKYVAY 415
           88888887789*****************545689***********************************************99877777889********* PP
   S: 283  gsedskvniwk 293
            s+d+++ ++ 
   Q: 416  QSSDNQILVYG 426
           ****9999986 PP

Organism

Trichoderma reesei

Protein Sequence
(Fasta)

MADFGEYPPN MAPQDALVVR QQAQPDHEVV KYTAEDLSRP QAGPAYPYKQ KENPLKRKNV 60
LTGHAEEMFL SEHSFRRKHR AVEAKAGPKV KVEREGKGDA SIAQGDGEYV GPWAKFKKDR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCCGACT TTGGCGAGTA TCCGCCCAAC ATGGCGCCGC AGGACGCGCT CGTGGTGCGC 60
CAGCAGGCGC AACCGGACCA CGAAGTCGTC AAGTACACGG CAGAAGACCT TTCACGGCCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR032847--PRPF17
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0071013--C:catalytic step 2 spliceosome
GO:0071014--C:post-mRNA release spliceosomal complex
GO:0000974--C:Prp19 complex
GO:0000398--P:mRNA splicing, via spliceosome

KEGG

tre:TRIREDRAFT_122070

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000473	Aegilops tauschii	52.91	3.00e-108	384.00
IUUC-Aml-002243	Ailuropoda melanoleuca	40.82	2.00e-79	288.00
IUUC-Atr-002502	Amborella trichopoda	53.60	1.00e-110	391.00
IUUC-Apl-003885	Anas platyrhynchos	44.06	9.00e-124	435.00
IUUC-Aca-004854	Anolis carolinensis	30.62	8.00e-65	239.00
IUUC-Aly-006158	Arabidopsis lyrata	53.78	2.00e-113	401.00
IUUC-Ath-007474	Arabidopsis thaliana	54.07	2.00e-113	401.00
IUUC-Ago-007726	Ashbya gossypii	40.05	3.00e-78	284.00
IUUC-Acl-008220	Aspergillus clavatus	58.38	3.00e-176	609.00
IUUC-Afl-008473	Aspergillus flavus	58.76	1.00e-173	601.00
IUUC-Afu-008773	Aspergillus fumigatus	58.06	6.00e-175	605.00
IUUC-Ani-009323	Aspergillus nidulans	56.22	8.00e-152	528.00
IUUC-Ang-009851	Aspergillus niger	58.60	3.00e-175	606.00
IUUC-Aor-009950	Aspergillus oryzae	58.76	1.00e-173	601.00
IUUC-Ate-010372	Aspergillus terreus	59.51	6.00e-178	615.00
IUUC-Ame-011660	Astyanax mexicanus	43.12	5.00e-126	442.00
IUUC-Bgr-012230	Blumeria graminis	66.67	0.00e+00	731.00
IUUC-Bta-012568	Bos taurus	43.22	7.00e-123	432.00
IUUC-Bci-013646	Botrytis cinerea	68.81	0.00e+00	732.00
IUUC-Bdi-014199	Brachypodium distachyon	53.04	5.00e-109	386.00
IUUC-Bol-015695	Brassica oleracea	53.49	2.00e-113	401.00
IUUC-Bra-017923	Brassica rapa	53.35	4.00e-113	399.00
IUUC-Cel-018535	Caenorhabditis elegans	36.56	3.00e-95	340.00
IUUC-Cja-019071	Callithrix jacchus	43.20	2.00e-122	431.00
IUUC-Cfa-020559	Canis familiaris	43.22	2.00e-122	431.00
IUUC-Cpo-022356	Cavia porcellus	43.38	5.00e-123	432.00
IUUC-Cre-022594	Chlamydomonas reinhardtii	37.64	5.00e-62	229.00
IUUC-Csa-023125	Chlorocebus sabaeus	43.20	2.00e-122	431.00
IUUC-Cho-024676	Choloepus hoffmanni	49.77	7.00e-123	432.00
IUUC-Cin-025229	Ciona intestinalis	41.07	1.00e-115	407.00
IUUC-Csv-025868	Ciona savignyi	56.82	4.00e-29	117.00
IUUC-Cgl-026739	Colletotrichum gloeosporioides	67.48	0.00e+00	702.00
IUUC-Cne-026885	Cryptococcus neoformans	45.06	1.00e-121	428.00
IUUC-Dre-027631	Danio rerio	43.30	2.00e-126	444.00
IUUC-Dno-029815	Dasypus novemcinctus	41.18	4.00e-119	420.00
IUUC-Dor-030978	Dipodomys ordii	53.80	2.00e-112	397.00
IUUC-Dse-031520	Dothistroma septosporum	53.50	6.00e-144	502.00
IUUC-Dme-032050	Drosophila melanogaster	42.10	2.00e-112	397.00
IUUC-Ete-032866	Echinops telfairi	42.31	7.00e-118	416.00
IUUC-Eca-033384	Equus caballus	43.22	6.00e-121	426.00
IUUC-Eeu-034471	Erinaceus europaeus	35.54	2.00e-80	291.00
IUUC-Fca-035727	Felis catus	43.22	8.00e-123	432.00
IUUC-Fal-036774	Ficedula albicollis	44.89	8.00e-126	442.00
IUUC-Fox-037951	Fusarium oxysporum	79.51	0.00e+00	880.00
IUUC-Fso-038287	Fusarium solani	80.23	0.00e+00	857.00
IUUC-Gmo-039670	Gadus morhua	43.49	3.00e-127	447.00
IUUC-Ggr-039764	Gaeumannomyces graminis	65.67	0.00e+00	730.00
IUUC-Gga-040293	Gallus gallus	44.42	4.00e-125	439.00
IUUC-Gac-042159	Gasterosteus aculeatus	43.80	5.00e-128	449.00
IUUC-Gma-044299	Glycine max	55.56	1.00e-113	401.00
IUUC-Ggo-044864	Gorilla gorilla	43.01	5.00e-122	429.00
IUUC-Hsa-046602	Homo sapiens	43.01	5.00e-122	429.00
IUUC-Hvu-047431	Hordeum vulgare	28.21	1.00e-31	128.00
IUUC-Itr-047985	Ictidomys tridecemlineatus	56.43	2.00e-120	423.00
IUUC-Kpa-049318	Komagataella pastoris	49.40	8.00e-105	372.00
IUUC-Lch-049796	Latimeria chalumnae	46.08	1.00e-104	372.00
IUUC-Lpe-051153	Leersia perrieri	53.37	6.00e-110	389.00
IUUC-Loc-052467	Lepisosteus oculatus	43.85	3.00e-127	447.00
IUUC-Lma-053107	Leptosphaeria maculans	59.52	4.00e-156	542.00
IUUC-Laf-053787	Loxodonta africana	43.43	1.00e-125	441.00
IUUC-Mcc-055706	Macaca mulatta	43.20	2.00e-122	431.00
IUUC-Meu-056757	Macropus eugenii	53.43	1.00e-102	365.00
IUUC-Mor-057079	Magnaporthe oryzae	64.39	0.00e+00	715.00
IUUC-Mpo-057533	Magnaporthe poae	63.32	0.00e+00	678.00
IUUC-Mtr-057950	Medicago truncatula	54.65	3.00e-113	400.00
IUUC-Mla-058910	Melampsora laricipopulina	48.08	1.00e-113	402.00
IUUC-Mga-059366	Meleagris gallopavo	44.42	5.00e-125	439.00
IUUC-Mvi-060349	Microbotryum violaceum	50.68	5.00e-113	400.00
IUUC-Mmr-061209	Microcebus murinus	43.75	2.00e-126	444.00
IUUC-Mdo-062118	Monodelphis domestica	43.46	2.00e-125	441.00
IUUC-Mmu-063173	Mus musculus	43.38	5.00e-123	432.00
IUUC-Mac-065080	Musa acuminata	52.91	7.00e-111	392.00
IUUC-Mpu-066659	Mustela putorius furo	43.22	6.00e-123	432.00
IUUC-Mlu-067029	Myotis lucifugus	44.32	4.00e-122	430.00
IUUC-Nfi-068334	Neosartorya fischeri	58.06	4.00e-175	606.00
IUUC-Ncr-068675	Neurospora crassa	60.04	0.00e+00	651.00
IUUC-Nle-070113	Nomascus leucogenys	43.20	2.00e-122	431.00
IUUC-Opr-070685	Ochotona princeps	55.81	1.00e-122	432.00
IUUC-Ont-071680	Oreochromis niloticus	44.30	4.00e-127	446.00
IUUC-Oan-073573	Ornithorhynchus anatinus	44.31	9.00e-119	418.00
IUUC-Ocu-074074	Oryctolagus cuniculus	43.93	1.00e-126	445.00
IUUC-Oba-075625	Oryza barthii	53.37	5.00e-110	389.00
IUUC-Obr-076510	Oryza brachyantha	53.22	3.00e-110	390.00
IUUC-Ogl-077275	Oryza glaberrima	53.37	5.00e-110	389.00
IUUC-Ogu-078563	Oryza glumaepatula	53.37	5.00e-110	389.00
IUUC-Oin-079898	Oryza indica	52.92	5.00e-109	386.00
IUUC-Olo-081080	Oryza longistaminata	53.37	5.00e-110	389.00
IUUC-Oni-083121	Oryza nivara	53.37	5.00e-110	389.00
IUUC-Opu-083329	Oryza punctata	53.37	5.00e-110	389.00
IUUC-Oru-084807	Oryza rufipogon	53.74	1.00e-93	335.00
IUUC-Osa-086039	Oryza sativa	53.51	1.00e-110	391.00
IUUC-Ola-087149	Oryzias latipes	43.57	8.00e-126	442.00
IUUC-Olu-087627	Ostreococcus lucimarinus	44.57	3.00e-88	317.00
IUUC-Oga-088359	Otolemur garnettii	43.38	7.00e-123	432.00
IUUC-Oar-089390	Ovis aries	43.22	2.00e-122	431.00
IUUC-Ptr-090894	Pan troglodytes	43.01	5.00e-122	429.00
IUUC-Pan-092476	Papio anubis	43.20	2.00e-122	431.00
IUUC-Psi-093527	Pelodiscus sinensis	42.55	8.00e-114	402.00
IUUC-Pno-094771	Phaeosphaeria nodorum	59.08	2.00e-156	543.00
IUUC-Ppa-095386	Physcomitrella patens	43.26	1.00e-115	408.00
IUUC-Pfo-096139	Poecilia formosa	44.12	2.00e-129	454.00
IUUC-Pab-097838	Pongo abelii	42.77	5.00e-104	369.00
IUUC-Pop-098945	Populus trichocarpa	53.78	5.00e-111	393.00
IUUC-Pca-100876	Procavia capensis	48.73	4.00e-100	356.00
IUUC-Ppe-101777	Prunus persica	54.39	1.00e-111	395.00
IUUC-Pva-102418	Pteropus vampyrus	43.04	4.00e-122	429.00
IUUC-Pgr-103456	Puccinia graminis	51.82	1.00e-123	435.00
IUUC-Ptt-103731	Puccinia triticina	49.02	1.00e-112	398.00
IUUC-Pte-104386	Pyrenophora teres	58.86	4.00e-148	516.00
IUUC-Pyt-104560	Pyrenophora triticirepentis	58.86	6.00e-149	518.00
IUUC-Rno-105694	Rattus norvegicus	56.43	2.00e-120	424.00
IUUC-Sce-106339	Saccharomyces cerevisiae	41.38	5.00e-80	290.00
IUUC-Sha-106709	Sarcophilus harrisii	43.41	5.00e-125	439.00
IUUC-Sja-107817	Schizosaccharomyces japonicus	44.17	2.00e-128	451.00
IUUC-Spo-108331	Schizosaccharomyces pombe	41.76	4.00e-121	426.00
IUUC-Ssl-108530	Sclerotinia sclerotiorum	68.33	0.00e+00	678.00
IUUC-Smo-108778	Selaginella moellendorffii	49.15	6.00e-99	352.00
IUUC-Sit-110446	Setaria italica	53.80	3.00e-110	390.00
IUUC-Sly-111330	Solanum lycopersicum	53.78	1.00e-111	395.00
IUUC-Stu-112610	Solanum tuberosum	53.49	2.00e-111	394.00
IUUC-Sar-113065	Sorex araneus	40.59	1.00e-37	149.00
IUUC-Sbi-114005	Sorghum bicolor	53.91	4.00e-110	389.00
IUUC-Sre-114988	Sporisorium reilianum	42.55	6.00e-129	452.00
IUUC-Ssc-115760	Sus scrofa	43.22	9.00e-123	432.00
IUUC-Tgu-116493	Taeniopygia guttata	45.07	1.00e-127	447.00
IUUC-Tru-118489	Takifugu rubripes	42.10	2.00e-124	437.00
IUUC-Tsy-119332	Tarsius syrichta	43.75	1.00e-126	444.00
IUUC-Tni-120202	Tetraodon nigroviridis	42.02	1.00e-114	405.00
IUUC-Tca-121429	Theobroma cacao	54.18	1.00e-110	392.00
IUUC-Tvi-122500	Trichoderma virens	90.52	0.00e+00	945.00
IUUC-Tae-125557	Triticum aestivum	52.75	5.00e-108	383.00
IUUC-Tur-126554	Triticum urartu	52.48	3.00e-106	377.00
IUUC-Tme-126919	Tuber melanosporum	56.00	1.00e-169	588.00
IUUC-Tbe-127968	Tupaia belangeri	41.18	4.00e-114	403.00
IUUC-Ttr-129215	Tursiops truncatus	43.04	1.00e-120	425.00
IUUC-Uma-129622	Ustilago maydis	43.47	5.00e-130	456.00
IUUC-Vda-129750	Verticillium dahliae	72.85	0.00e+00	798.00
IUUC-Vpa-130617	Vicugna pacos	43.99	3.00e-121	426.00
IUUC-Vvi-131238	Vitis vinifera	53.60	2.00e-110	391.00
IUUC-Xtr-131865	Xenopus tropicalis	44.17	2.00e-123	434.00
IUUC-Xma-133627	Xiphophorus maculatus	44.12	2.00e-129	454.00
IUUC-Yli-134390	Yarrowia lipolytica	55.56	5.00e-114	402.00
IUUC-Zma-135925	Zea mays	53.91	8.00e-105	372.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence