iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Bdi-014277

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000882

Gene Name

LOC100829617; BRADI_3g28280

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
BRADI3G28280	BRADI3G28280.1	BRADI3G28280.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	7.20e-14	52.2	1	67
E3 adaptor/Cullin RING/DCX/DWD	1.40e-25	88.8	261	291
UBD/Beta-Prp	5.30e-51	174.1	221	444

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 6    flCpIslelMrdPvvlp.sGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceen 72
           ++C+Is+e++++Pvv++ sG  ++r+ Ie+++++ gk cPvt+q l+ +d+v  +t + +  + +++ 
   Q: 1    MICAISGEVPEEPVVSKsSGLLFERRLIERYIEDHGK-CPVTKQDLSMDDIVLVKTNKVVKPRPLQAA 67
           58**************99******************9.*************99999888888777765 PP

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWD 29
           gH+ ++t l+f   d l+v+Gs D+t+++W 
   Q: 261  GHSKKITTLKFvpRDELVVTGSADKTVRIWQ 291
           8***********877***************5 PP

UBD/Beta-Prp

   S: 10   ksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdls...tgkcvhtlkghedsvlsls 101
           k  i +++++p+k+++atg+ d    ++d  +g+ l++lsgh++++t++kf p++++ vtgs D+t+++w  s   ++ c+htlk h++++ +++
   Q: 221  KPGILSMDIHPSKDIIATGGIDTNAVLFDRPSGQILSTLSGHSKKITTLKFVPRDELVVTGSADKTVRIWQGSeegNYNCIHTLKDHTAEIEAVT 315
           445566999*************************************************************666667******************* PP
   S: 102  fspsgdklvsGshdrtirvwdletgqclee.tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkel 195
           ++++++++v++ +d+t   +d++tg+cl++  ++   +  +++++hpdg +l +G++D +v++Wd+kt++ + +++g h ++v+ +sf++ng +l
   Q: 316  VHATQKYFVTAARDNTWCFYDISTGYCLSQvGEASGLEGYTSASFHPDGLILGTGTTDAAVKIWDVKTQSNVAKFEG-HAGPVTAMSFSENGYFL 409
           *****************************9745555677899**********************************9.***************** PP
   S: 196  vsgsldgtvklwdlqtgecvrtlnght..dnvksvr 229
           ++++ldg vklwdl++ +  rt+  ++  ++++sv+
   Q: 410  ATAALDG-VKLWDLRKLRNFRTFSPYDsdTPTNSVE 444
           ******9.9******888888887544225555555 PP

Organism

Brachypodium distachyon

Protein Sequence
(Fasta)

MICAISGEVP EEPVVSKSSG LLFERRLIER YIEDHGKCPV TKQDLSMDDI VLVKTNKVVK 60
PRPLQAASIP GLLGIFQNEW DALMLSNFAL EQQLHTARQE LSHALYQHDA ACRVIARLKK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACTTCACTCG AATTAAAACC CTAGCGGCTA TACCTTTGCT ACCCGCCGCC TCCTCCCGTC 60
GCCGGCGCGC TGCCACCCCC ACCCCCAGAG AGATTGCCAC CTGAGAGCGC CGCGTCCTCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR013915--Pre-mRNA_splic_Prp19
IPR003613--Ubox_domain
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08606--Prp19
PF00400--WD40

SMART

SM00504--Ubox
SM00320--WD40

Gene Ontology

GO:0000974--C:Prp19 complex
GO:0071006--C:U2-type catalytic step 1 spliceosome
GO:0004842--F:ubiquitin-protein transferase activity
GO:0000349--P:generation of catalytic spliceosome for first transesterification step

KEGG

bdi:100829617

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001230	Ailuropoda melanoleuca	43.75	5.00e-112	397.00
IUUC-Atr-002594	Amborella trichopoda	75.38	0.00e+00	828.00
IUUC-Apl-003686	Anas platyrhynchos	42.13	8.00e-87	313.00
IUUC-Aca-005272	Anolis carolinensis	44.62	9.00e-119	419.00
IUUC-Aly-005586	Arabidopsis lyrata	72.24	0.00e+00	791.00
IUUC-Ago-007879	Ashbya gossypii	47.45	3.00e-28	118.00
IUUC-Acl-008335	Aspergillus clavatus	33.92	1.00e-61	229.00
IUUC-Afl-008527	Aspergillus flavus	35.08	2.00e-67	248.00
IUUC-Afu-008957	Aspergillus fumigatus	34.45	4.00e-72	264.00
IUUC-Ani-009280	Aspergillus nidulans	34.93	1.00e-62	233.00
IUUC-Ang-009746	Aspergillus niger	33.96	4.00e-69	254.00
IUUC-Aor-009905	Aspergillus oryzae	34.87	4.00e-69	254.00
IUUC-Ate-010412	Aspergillus terreus	34.59	3.00e-63	235.00
IUUC-Ame-011561	Astyanax mexicanus	43.87	3.00e-44	171.00
IUUC-Bgr-012283	Blumeria graminis	29.48	2.00e-49	189.00
IUUC-Bta-013242	Bos taurus	43.95	3.00e-119	421.00
IUUC-Bci-013901	Botrytis cinerea	33.53	2.00e-67	249.00
IUUC-Cja-019879	Callithrix jacchus	43.87	1.00e-117	416.00
IUUC-Cfa-020175	Canis familiaris	44.29	2.00e-118	419.00
IUUC-Cpo-022379	Cavia porcellus	43.76	8.00e-119	419.00
IUUC-Cre-022993	Chlamydomonas reinhardtii	47.00	3.00e-130	457.00
IUUC-Csa-023500	Chlorocebus sabaeus	43.76	9.00e-119	419.00
IUUC-Cho-025065	Choloepus hoffmanni	37.30	4.00e-46	177.00
IUUC-Cin-025699	Ciona intestinalis	46.03	3.00e-104	371.00
IUUC-Csv-026128	Ciona savignyi	43.07	7.00e-116	410.00
IUUC-Cgl-026507	Colletotrichum gloeosporioides	31.85	6.00e-63	234.00
IUUC-Dre-028187	Danio rerio	44.10	7.00e-117	413.00
IUUC-Dno-029453	Dasypus novemcinctus	43.76	1.00e-118	419.00
IUUC-Dor-030150	Dipodomys ordii	42.00	4.00e-43	168.00
IUUC-Dse-031220	Dothistroma septosporum	34.10	7.00e-66	243.00
IUUC-Dme-031906	Drosophila melanogaster	43.13	5.00e-110	390.00
IUUC-Ete-033035	Echinops telfairi	42.44	2.00e-54	206.00
IUUC-Eca-033478	Equus caballus	43.95	5.00e-119	420.00
IUUC-Eeu-034974	Erinaceus europaeus	44.61	7.00e-79	287.00
IUUC-Fca-036194	Felis catus	43.71	2.00e-116	412.00
IUUC-Fal-037417	Ficedula albicollis	44.81	1.00e-119	422.00
IUUC-Fox-037922	Fusarium oxysporum	32.14	7.00e-64	237.00
IUUC-Fso-038256	Fusarium solani	32.84	1.00e-66	246.00
IUUC-Gmo-038713	Gadus morhua	44.10	2.00e-117	415.00
IUUC-Gga-041143	Gallus gallus	44.62	4.00e-119	421.00
IUUC-Gac-042129	Gasterosteus aculeatus	44.98	2.00e-119	421.00
IUUC-Gma-043635	Glycine max	76.15	0.00e+00	838.00
IUUC-Ggo-045262	Gorilla gorilla	43.76	9.00e-119	419.00
IUUC-Hsa-046036	Homo sapiens	43.76	9.00e-119	419.00
IUUC-Hvu-047442	Hordeum vulgare	94.21	1.00e-178	617.00
IUUC-Itr-048169	Ictidomys tridecemlineatus	44.29	1.00e-116	412.00
IUUC-Kpa-049195	Komagataella pastoris	38.99	3.00e-21	95.90
IUUC-Lch-050105	Latimeria chalumnae	43.71	8.00e-116	409.00
IUUC-Lpe-050976	Leersia perrieri	89.94	0.00e+00	973.00
IUUC-Loc-052042	Lepisosteus oculatus	39.26	1.00e-82	299.00
IUUC-Lma-053143	Leptosphaeria maculans	33.19	1.00e-66	247.00
IUUC-Laf-053451	Loxodonta africana	42.19	5.00e-115	407.00
IUUC-Mcc-055786	Macaca mulatta	43.76	9.00e-119	419.00
IUUC-Meu-056161	Macropus eugenii	43.10	3.00e-53	202.00
IUUC-Mor-057215	Magnaporthe oryzae	32.69	1.00e-60	226.00
IUUC-Mpo-057419	Magnaporthe poae	32.63	2.00e-57	215.00
IUUC-Mtr-057756	Medicago truncatula	73.36	0.00e+00	802.00
IUUC-Mla-059085	Melampsora laricipopulina	36.38	7.00e-82	296.00
IUUC-Mga-060158	Meleagris gallopavo	44.07	1.00e-103	369.00
IUUC-Mmr-061085	Microcebus murinus	43.76	9.00e-119	419.00
IUUC-Mdo-061804	Monodelphis domestica	43.76	1.00e-118	419.00
IUUC-Mmu-063608	Mus musculus	42.22	2.00e-115	408.00
IUUC-Mpu-065700	Mustela putorius furo	44.29	1.00e-118	419.00
IUUC-Mlu-068223	Myotis lucifugus	42.72	5.00e-116	410.00
IUUC-Nfi-068504	Neosartorya fischeri	33.82	2.00e-70	258.00
IUUC-Ncr-068729	Neurospora crassa	31.58	3.00e-59	221.00
IUUC-Nle-069754	Nomascus leucogenys	43.76	9.00e-119	419.00
IUUC-Opr-070621	Ochotona princeps	45.06	3.00e-110	391.00
IUUC-Ont-071377	Oreochromis niloticus	44.87	3.00e-117	414.00
IUUC-Oan-073498	Ornithorhynchus anatinus	32.13	2.00e-37	149.00
IUUC-Ocu-074182	Oryctolagus cuniculus	42.07	7.00e-115	406.00
IUUC-Oba-075509	Oryza barthii	90.29	0.00e+00	1006.00
IUUC-Obr-076480	Oryza brachyantha	89.94	0.00e+00	1001.00
IUUC-Ogl-077052	Oryza glaberrima	90.13	0.00e+00	1007.00
IUUC-Ogu-078919	Oryza glumaepatula	89.75	0.00e+00	1003.00
IUUC-Oin-079357	Oryza indica	85.39	0.00e+00	936.00
IUUC-Olo-080376	Oryza longistaminata	89.49	0.00e+00	941.00
IUUC-Ome-081973	Oryza meridionalis	90.06	0.00e+00	943.00
IUUC-Oni-082849	Oryza nivara	89.75	0.00e+00	1002.00
IUUC-Opu-083243	Oryza punctata	90.70	0.00e+00	1010.00
IUUC-Oru-084613	Oryza rufipogon	89.94	0.00e+00	1004.00
IUUC-Osa-085407	Oryza sativa	89.94	0.00e+00	1004.00
IUUC-Ola-086566	Oryzias latipes	44.42	1.00e-117	415.00
IUUC-Olu-087757	Ostreococcus lucimarinus	43.27	1.00e-113	402.00
IUUC-Oga-089010	Otolemur garnettii	42.21	5.00e-111	394.00
IUUC-Oar-089638	Ovis aries	43.95	3.00e-119	421.00
IUUC-Ptr-091141	Pan troglodytes	43.76	9.00e-119	419.00
IUUC-Pan-092662	Papio anubis	43.76	9.00e-119	419.00
IUUC-Psi-093777	Pelodiscus sinensis	43.55	2.00e-91	328.00
IUUC-Pno-095115	Phaeosphaeria nodorum	33.74	6.00e-68	250.00
IUUC-Ppa-095924	Physcomitrella patens	69.83	0.00e+00	761.00
IUUC-Pfo-096390	Poecilia formosa	45.45	7.00e-119	419.00
IUUC-Pab-098250	Pongo abelii	43.89	1.00e-113	402.00
IUUC-Pop-099854	Populus trichocarpa	74.37	0.00e+00	825.00
IUUC-Pca-100553	Procavia capensis	44.42	1.00e-116	412.00
IUUC-Ppe-101383	Prunus persica	73.75	0.00e+00	810.00
IUUC-Pva-102189	Pteropus vampyrus	43.95	3.00e-119	421.00
IUUC-Pgr-103304	Puccinia graminis	35.42	7.00e-79	287.00
IUUC-Pte-104385	Pyrenophora teres	33.06	1.00e-65	242.00
IUUC-Pyt-104697	Pyrenophora triticirepentis	32.93	2.00e-64	239.00
IUUC-Rno-105581	Rattus norvegicus	43.76	6.00e-119	420.00
IUUC-Sha-107071	Sarcophilus harrisii	41.80	1.00e-114	405.00
IUUC-Sja-107697	Schizosaccharomyces japonicus	31.69	1.00e-45	176.00
IUUC-Spo-108315	Schizosaccharomyces pombe	29.79	3.00e-41	162.00
IUUC-Ssl-108628	Sclerotinia sclerotiorum	34.35	1.00e-63	236.00
IUUC-Sit-109873	Setaria italica	90.96	0.00e+00	976.00
IUUC-Sly-111673	Solanum lycopersicum	75.24	0.00e+00	814.00
IUUC-Stu-112125	Solanum tuberosum	75.58	0.00e+00	813.00
IUUC-Sbi-114696	Sorghum bicolor	83.65	0.00e+00	862.00
IUUC-Ssc-116260	Sus scrofa	43.95	2.00e-119	421.00
IUUC-Tgu-116533	Taeniopygia guttata	44.81	3.00e-119	421.00
IUUC-Tru-117800	Takifugu rubripes	44.15	6.00e-119	420.00
IUUC-Tsy-118980	Tarsius syrichta	43.08	2.00e-103	368.00
IUUC-Tni-120334	Tetraodon nigroviridis	43.15	6.00e-79	287.00
IUUC-Tre-121920	Trichoderma reesei	31.38	4.00e-58	218.00
IUUC-Tvi-122294	Trichoderma virens	30.27	3.00e-51	195.00
IUUC-Tae-125713	Triticum aestivum	95.26	0.00e+00	1053.00
IUUC-Tur-126664	Triticum urartu	85.44	0.00e+00	1005.00
IUUC-Tme-127026	Tuber melanosporum	35.93	8.00e-73	266.00
IUUC-Tbe-127582	Tupaia belangeri	44.31	1.00e-78	286.00
IUUC-Ttr-128313	Tursiops truncatus	44.72	6.00e-118	416.00
IUUC-Vda-129699	Verticillium dahliae	32.64	7.00e-60	224.00
IUUC-Vpa-130593	Vicugna pacos	45.28	2.00e-110	392.00
IUUC-Vvi-131668	Vitis vinifera	77.26	0.00e+00	854.00
IUUC-Xtr-132186	Xenopus tropicalis	46.58	4.00e-103	367.00
IUUC-Xma-133212	Xiphophorus maculatus	44.87	3.00e-118	417.00
IUUC-Zma-135662	Zea mays	90.38	0.00e+00	976.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence