iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Nle-068997

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

ADFV01025483

Gene Name

PDZRN3

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSNLEG00000002833.2	ENSNLET00000003664.2	ENSNLEP00000003491.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.30e-06	28.0	3	41

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCP.lC 45
           Ca+C+  ++d pl++pCgHvf+a C+  w        +e +CP  C
   Q: 3    CALCHKVLED-PLTTPCGHVFCAGCVLPW------VVQEGSCPaRC 41
           **********.******************......88888888445 PP

Organism

Nomascus leucogenys

Protein Sequence
(Fasta)

LKCALCHKVL EDPLTTPCGH VFCAGCVLPW VVQEGSCPAR CRGRLSAKEL NHVLPLKRLI 60
LKLDIKCAYA ARGCGRVVKL QQLPEHLERC DFAPARCRHA GCGQVLLRRD VEAHMRDACD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTGAAGTGCG CGCTGTGCCA CAAGGTCCTG GAGGACCCGC TGACCACGCC GTGCGGCCAC 60
GTCTTCTGCG CCGGCTGCGT GCTGCCCTGG GTGGTGCAGG AGGGCAGCTG CCCGGCGCGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001478--PDZ
IPR008974--TRAF-like
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS
IPR001293--Znf_TRAF

PROSITE

PS50106--PDZ
PS00518--ZF_RING_1
PS50089--ZF_RING_2
PS50145--ZF_TRAF

Pfam

PF00595--PDZ

SMART

SM00228--PDZ
SM00184--RING

Gene Ontology

GO:0005829--C:cytosol
GO:0005654--C:nucleoplasm
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001910	Ailuropoda melanoleuca	91.87	0.00e+00	1550.00
IUUC-Apl-003623	Anas platyrhynchos	85.65	0.00e+00	1330.00
IUUC-Ame-011171	Astyanax mexicanus	48.69	0.00e+00	695.00
IUUC-Bta-012364	Bos taurus	92.13	0.00e+00	1840.00
IUUC-Cja-019726	Callithrix jacchus	98.43	0.00e+00	1581.00
IUUC-Cpo-021680	Cavia porcellus	93.65	0.00e+00	1870.00
IUUC-Csa-023684	Chlorocebus sabaeus	99.05	0.00e+00	2023.00
IUUC-Cho-024555	Choloepus hoffmanni	77.06	6.00e-109	388.00
IUUC-Dre-027462	Danio rerio	71.62	0.00e+00	1402.00
IUUC-Dno-029974	Dasypus novemcinctus	95.83	3.00e-37	147.00
IUUC-Dor-031125	Dipodomys ordii	89.64	0.00e+00	1707.00
IUUC-Ete-032745	Echinops telfairi	82.90	0.00e+00	888.00
IUUC-Eca-034276	Equus caballus	94.74	0.00e+00	1517.00
IUUC-Fal-037334	Ficedula albicollis	79.39	0.00e+00	1535.00
IUUC-Gmo-038706	Gadus morhua	70.01	0.00e+00	1339.00
IUUC-Gga-040586	Gallus gallus	83.00	0.00e+00	1584.00
IUUC-Gac-041605	Gasterosteus aculeatus	68.31	0.00e+00	1327.00
IUUC-Ggo-044706	Gorilla gorilla	99.90	0.00e+00	2040.00
IUUC-Hsa-046677	Homo sapiens	99.81	0.00e+00	2040.00
IUUC-Itr-048660	Ictidomys tridecemlineatus	89.15	0.00e+00	1764.00
IUUC-Lch-049637	Latimeria chalumnae	67.81	2.00e-119	421.00
IUUC-Loc-052305	Lepisosteus oculatus	75.59	0.00e+00	1499.00
IUUC-Mcc-055573	Macaca mulatta	99.24	0.00e+00	2029.00
IUUC-Meu-056805	Macropus eugenii	82.21	0.00e+00	1620.00
IUUC-Mdo-062581	Monodelphis domestica	85.63	0.00e+00	1706.00
IUUC-Mmu-063597	Mus musculus	94.58	0.00e+00	1897.00
IUUC-Mpu-065685	Mustela putorius furo	94.74	0.00e+00	1410.00
IUUC-Mlu-067150	Myotis lucifugus	73.73	0.00e+00	1018.00
IUUC-Ont-071534	Oreochromis niloticus	70.18	0.00e+00	1332.00
IUUC-Ola-086381	Oryzias latipes	68.43	0.00e+00	1342.00
IUUC-Oga-089068	Otolemur garnettii	95.62	0.00e+00	1895.00
IUUC-Oar-089252	Ovis aries	98.33	1.00e-69	256.00
IUUC-Pan-092366	Papio anubis	99.24	0.00e+00	2028.00
IUUC-Psi-093611	Pelodiscus sinensis	55.33	1.00e-76	279.00
IUUC-Pfo-096576	Poecilia formosa	66.67	1.00e-114	405.00
IUUC-Pab-098239	Pongo abelii	99.52	0.00e+00	2033.00
IUUC-Pca-100484	Procavia capensis	90.40	0.00e+00	896.00
IUUC-Pva-103202	Pteropus vampyrus	52.30	0.00e+00	857.00
IUUC-Rno-105931	Rattus norvegicus	94.20	0.00e+00	1918.00
IUUC-Tgu-116615	Taeniopygia guttata	79.45	2.00e-101	361.00
IUUC-Tru-118175	Takifugu rubripes	71.24	0.00e+00	1370.00
IUUC-Tsy-119569	Tarsius syrichta	88.42	0.00e+00	1466.00
IUUC-Tbe-127819	Tupaia belangeri	89.75	0.00e+00	1436.00
IUUC-Ttr-128328	Tursiops truncatus	93.01	0.00e+00	1496.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence