iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-111063

Ensembl Protein ID

Solyc01g109350.2.1

UniProt Accession

K4B3E8; K4B3E8_SOLLC

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc01g109350.2	Solyc01g109350.2.1	Solyc01g109350.2.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.60e-29	101.5	186	221
UBD/Beta-Prp	4.60e-42	145.0	12	297

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvl 35
           gHtd v++la  ++ + ++s+s+Dgti++W+l+ +vl
   Q: 186  GHTDTVRGLAVvPGlG-VLSASHDGTIRLWELSGQVL 221
           8*********998644.7*************976665 PP

UBD/Beta-Prp

   S: 3    ktlkghhksvitcvkfspdksllatgsrdgtikvwdvttgkl.....lrslsgheaevtavkfspdgk.....ilvtgseDrtikvwdlst 83
           ++l gh+++v     +  dk  +at+srd+ti+ w+ ++ +       + l gh+++v  + +   ++      lv+g+ D +i vw+lst
   Q: 12   CQLTGHEDDVRGICIC--DKVGFATSSRDRTIRFWSPDESNHrrfttSKILLGHTSFVGPLAWVAPSEelpegGLVSGGMDTLILVWNLST 100
           8999999999995445..9999*****************999999988889******66655533333344558***************** PP
   S: 84   gkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrt 174
           g+ v+tlkgh+ +v+ ++++   + +vs+s d t+r w  ++gq++e +l+ h+++++ +   p +  lv+Gs D+t+++W+   + + +t
   Q: 101  GDKVQTLKGHKLQVTGIALDG--SDVVSTSVDCTLRRW--RKGQEVE-VLEAHKAAIQAIIRLP-SGELVTGSSDTTLKVWNG--AACAHT 183
           ******************999..***************..******9.*********9998888.46689***********88..9***** PP
   S: 175  ltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktlqlhns 265
           ++g htd v+ l++ + g  ++s+s+dgt++lw+l +g+++ ++ ght+ v+sv+++  + ++vsgs+D+  +iW  + g ++++l+++  
   Q: 184  FSG-HTDTVRGLAVVP-GLGVLSASHDGTIRLWEL-SGQVLLEMVGHTSIVYSVDAH-ASGLIVSGSEDRFAKIW--KDGVCVQSLEHPG- 267
           **9.************.68****************.899******************.9****************..89********987. PP
   S: 266  svisvavlsfgdnvlvlgsedskvniwklkkn 297
            v+  ++  +++  +v++ +d+ v+iw + ++
   Q: 268  CVWDAKF--LDNGDIVTACSDGVVRIWTVHQD 297
           9******..9999**************99766 PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MEIDSAEYQL RCQLTGHEDD VRGICICDKV GFATSSRDRT IRFWSPDESN HRRFTTSKIL 60
LGHTSFVGPL AWVAPSEELP EGGLVSGGMD TLILVWNLST GDKVQTLKGH KLQVTGIALD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTAAATCAGG GGGAAACGAA TATTATTTCC TTCAAACAAA AATAAGTAAA TAAATAAATA 60
AATCGCCGAG AAGGCGGAAA GACGGTGGAA AGAACTCAGT GGTAAGTCTT GGAGAGCAAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR011989--ARM-like
IPR020472--G-protein_beta_WD-40_rep
IPR033510--PLAA/Doa1/Lub1
IPR015155--PLAA_fam_Ub-bd_PFU
IPR013535--PUL_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS51394--PFU
PS51396--PUL
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF09070--PFU
PF08324--PUL
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005829--C:cytosol
GO:0005634--C:nucleus
GO:0009506--C:plasmodesma
GO:0043130--F:ubiquitin binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0010992--P:ubiquitin homeostasis

KEGG

sly:101264260

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000146	Aegilops tauschii	62.08	0.00e+00	931.00
IUUC-Aml-002125	Ailuropoda melanoleuca	33.81	3.00e-113	402.00
IUUC-Atr-002554	Amborella trichopoda	62.05	0.00e+00	929.00
IUUC-Apl-004094	Anas platyrhynchos	32.82	2.00e-99	355.00
IUUC-Aca-004726	Anolis carolinensis	33.59	1.00e-108	387.00
IUUC-Aly-005961	Arabidopsis lyrata	69.13	0.00e+00	1051.00
IUUC-Ath-006639	Arabidopsis thaliana	69.13	0.00e+00	1048.00
IUUC-Ago-007772	Ashbya gossypii	29.22	2.00e-73	269.00
IUUC-Acl-008316	Aspergillus clavatus	30.25	3.00e-75	275.00
IUUC-Afl-008532	Aspergillus flavus	30.30	2.00e-81	296.00
IUUC-Afu-008950	Aspergillus fumigatus	30.61	2.00e-84	305.00
IUUC-Ani-009186	Aspergillus nidulans	31.05	1.00e-86	313.00
IUUC-Ang-009575	Aspergillus niger	30.30	9.00e-80	290.00
IUUC-Aor-010086	Aspergillus oryzae	30.30	2.00e-81	296.00
IUUC-Ate-010541	Aspergillus terreus	29.91	1.00e-82	300.00
IUUC-Ame-011633	Astyanax mexicanus	33.51	2.00e-111	396.00
IUUC-Bgr-012292	Blumeria graminis	28.94	4.00e-80	291.00
IUUC-Bta-013218	Bos taurus	33.55	7.00e-114	404.00
IUUC-Bci-013876	Botrytis cinerea	32.52	4.00e-91	328.00
IUUC-Bdi-014810	Brachypodium distachyon	63.48	0.00e+00	982.00
IUUC-Bol-016006	Brassica oleracea	68.73	0.00e+00	1063.00
IUUC-Bra-017593	Brassica rapa	69.53	0.00e+00	1075.00
IUUC-Cel-018703	Caenorhabditis elegans	21.55	2.00e-32	133.00
IUUC-Cja-019270	Callithrix jacchus	33.63	1.00e-114	406.00
IUUC-Cfa-021262	Canis familiaris	33.68	2.00e-113	402.00
IUUC-Cpo-021449	Cavia porcellus	33.20	4.00e-101	361.00
IUUC-Csa-024140	Chlorocebus sabaeus	33.64	2.00e-114	406.00
IUUC-Cho-024923	Choloepus hoffmanni	37.39	4.00e-42	165.00
IUUC-Cin-025373	Ciona intestinalis	32.16	9.00e-96	343.00
IUUC-Csv-026324	Ciona savignyi	31.09	2.00e-85	309.00
IUUC-Cgl-026711	Colletotrichum gloeosporioides	27.53	4.00e-73	268.00
IUUC-Cne-026998	Cryptococcus neoformans	28.63	6.00e-46	178.00
IUUC-Cme-027154	Cyanidioschyzon merolae	27.94	2.00e-54	206.00
IUUC-Dre-028674	Danio rerio	32.55	1.00e-106	380.00
IUUC-Dno-028966	Dasypus novemcinctus	33.38	2.00e-112	399.00
IUUC-Dor-030343	Dipodomys ordii	30.52	8.00e-52	197.00
IUUC-Dse-031385	Dothistroma septosporum	27.84	3.00e-71	262.00
IUUC-Dme-032044	Drosophila melanogaster	28.19	2.00e-75	276.00
IUUC-Ete-032506	Echinops telfairi	27.80	2.00e-46	179.00
IUUC-Eca-033547	Equus caballus	33.85	3.00e-113	402.00
IUUC-Eeu-034462	Erinaceus europaeus	38.66	4.00e-43	169.00
IUUC-Fca-035893	Felis catus	33.29	2.00e-111	396.00
IUUC-Fal-037235	Ficedula albicollis	32.60	7.00e-108	384.00
IUUC-Fox-037836	Fusarium oxysporum	30.20	1.00e-86	313.00
IUUC-Fso-038251	Fusarium solani	30.43	2.00e-86	313.00
IUUC-Gmo-038648	Gadus morhua	33.18	5.00e-100	357.00
IUUC-Ggr-039867	Gaeumannomyces graminis	28.84	3.00e-78	285.00
IUUC-Gga-040989	Gallus gallus	34.38	2.00e-114	405.00
IUUC-Gac-041344	Gasterosteus aculeatus	32.37	8.00e-99	354.00
IUUC-Gma-043067	Glycine max	73.65	0.00e+00	1120.00
IUUC-Ggo-045009	Gorilla gorilla	35.29	8.00e-96	343.00
IUUC-Hsa-046807	Homo sapiens	33.64	1.00e-113	403.00
IUUC-Itr-048636	Ictidomys tridecemlineatus	33.98	5.00e-116	411.00
IUUC-Kpa-049134	Komagataella pastoris	29.44	3.00e-73	268.00
IUUC-Lch-049597	Latimeria chalumnae	34.45	6.00e-71	260.00
IUUC-Lpe-050821	Leersia perrieri	61.49	0.00e+00	950.00
IUUC-Loc-051849	Lepisosteus oculatus	32.72	9.00e-107	380.00
IUUC-Lma-053297	Leptosphaeria maculans	30.79	3.00e-86	311.00
IUUC-Laf-053495	Loxodonta africana	33.59	9.00e-114	403.00
IUUC-Meu-055983	Macropus eugenii	36.94	3.00e-36	146.00
IUUC-Mor-057006	Magnaporthe oryzae	27.49	2.00e-71	263.00
IUUC-Mpo-057465	Magnaporthe poae	28.59	3.00e-76	279.00
IUUC-Mtr-058374	Medicago truncatula	71.22	0.00e+00	1130.00
IUUC-Mla-058895	Melampsora laricipopulina	34.29	2.00e-61	229.00
IUUC-Mvi-060297	Microbotryum violaceum	30.82	1.00e-81	296.00
IUUC-Mmr-060810	Microcebus murinus	32.68	9.00e-103	367.00
IUUC-Mdo-062671	Monodelphis domestica	33.46	1.00e-110	393.00
IUUC-Mmu-063536	Mus musculus	34.07	5.00e-113	401.00
IUUC-Mac-064902	Musa acuminata	64.95	0.00e+00	1013.00
IUUC-Mpu-066085	Mustela putorius furo	33.81	1.00e-114	406.00
IUUC-Mlu-067907	Myotis lucifugus	38.05	3.00e-89	321.00
IUUC-Nfi-068457	Neosartorya fischeri	30.79	1.00e-68	253.00
IUUC-Ncr-068622	Neurospora crassa	28.52	8.00e-82	297.00
IUUC-Nle-069049	Nomascus leucogenys	33.12	3.00e-109	388.00
IUUC-Opr-071013	Ochotona princeps	35.45	4.00e-26	112.00
IUUC-Ont-071339	Oreochromis niloticus	32.81	1.00e-109	390.00
IUUC-Oan-073353	Ornithorhynchus anatinus	38.16	5.00e-41	159.00
IUUC-Ocu-074625	Oryctolagus cuniculus	33.90	3.00e-115	408.00
IUUC-Oba-075226	Oryza barthii	58.01	0.00e+00	855.00
IUUC-Obr-076875	Oryza brachyantha	63.58	0.00e+00	1005.00
IUUC-Ogl-077057	Oryza glaberrima	63.97	0.00e+00	989.00
IUUC-Ogu-078156	Oryza glumaepatula	63.97	0.00e+00	986.00
IUUC-Oin-079373	Oryza indica	63.97	0.00e+00	985.00
IUUC-Olo-080849	Oryza longistaminata	55.85	0.00e+00	696.00
IUUC-Ome-081654	Oryza meridionalis	58.01	0.00e+00	853.00
IUUC-Oni-082221	Oryza nivara	58.68	0.00e+00	869.00
IUUC-Opu-084103	Oryza punctata	58.28	0.00e+00	841.00
IUUC-Oru-084751	Oryza rufipogon	57.88	0.00e+00	849.00
IUUC-Osa-085584	Oryza sativa	64.11	0.00e+00	987.00
IUUC-Ola-086974	Oryzias latipes	32.12	7.00e-108	384.00
IUUC-Oga-088052	Otolemur garnettii	31.61	1.00e-101	363.00
IUUC-Oar-089509	Ovis aries	33.29	1.00e-110	393.00
IUUC-Ptr-090911	Pan troglodytes	33.64	2.00e-113	402.00
IUUC-Pan-092141	Papio anubis	33.51	9.00e-113	400.00
IUUC-Psi-093543	Pelodiscus sinensis	32.02	7.00e-96	344.00
IUUC-Pno-094952	Phaeosphaeria nodorum	30.46	3.00e-83	302.00
IUUC-Ppa-095881	Physcomitrella patens	53.12	0.00e+00	817.00
IUUC-Pfo-096739	Poecilia formosa	31.63	2.00e-102	366.00
IUUC-Pab-098641	Pongo abelii	33.64	4.00e-113	401.00
IUUC-Pop-099493	Populus trichocarpa	72.43	0.00e+00	1109.00
IUUC-Pca-100599	Procavia capensis	30.08	5.00e-84	305.00
IUUC-Ppe-101874	Prunus persica	76.39	0.00e+00	1182.00
IUUC-Pva-103009	Pteropus vampyrus	31.77	2.00e-86	312.00
IUUC-Pgr-103260	Puccinia graminis	30.04	7.00e-76	277.00
IUUC-Ptt-103711	Puccinia triticina	29.20	3.00e-68	252.00
IUUC-Pte-104337	Pyrenophora teres	31.89	2.00e-81	296.00
IUUC-Pyt-104475	Pyrenophora triticirepentis	32.02	4.00e-82	298.00
IUUC-Rno-105273	Rattus norvegicus	34.29	5.00e-115	407.00
IUUC-Sce-106351	Saccharomyces cerevisiae	29.07	1.00e-63	237.00
IUUC-Sha-106758	Sarcophilus harrisii	33.33	3.00e-109	389.00
IUUC-Sja-107687	Schizosaccharomyces japonicus	28.36	1.00e-83	303.00
IUUC-Spo-108093	Schizosaccharomyces pombe	31.67	2.00e-94	339.00
IUUC-Ssl-108623	Sclerotinia sclerotiorum	32.33	5.00e-84	305.00
IUUC-Smo-109368	Selaginella moellendorffii	50.07	0.00e+00	750.00
IUUC-Sit-109699	Setaria italica	63.93	0.00e+00	1011.00
IUUC-Sar-113199	Sorex araneus	38.35	7.00e-76	277.00
IUUC-Sbi-114745	Sorghum bicolor	60.96	0.00e+00	961.00
IUUC-Sre-115080	Sporisorium reilianum	37.20	2.00e-75	276.00
IUUC-Ssc-115666	Sus scrofa	33.16	1.00e-110	393.00
IUUC-Tgu-116877	Taeniopygia guttata	33.07	1.00e-108	387.00
IUUC-Tru-117580	Takifugu rubripes	31.94	1.00e-104	373.00
IUUC-Tsy-118946	Tarsius syrichta	32.87	6.00e-99	354.00
IUUC-Tni-119755	Tetraodon nigroviridis	32.99	4.00e-105	375.00
IUUC-Tca-120977	Theobroma cacao	73.42	0.00e+00	1170.00
IUUC-Tre-122217	Trichoderma reesei	31.90	1.00e-90	327.00
IUUC-Tvi-122671	Trichoderma virens	31.11	2.00e-87	316.00
IUUC-Tae-125234	Triticum aestivum	64.81	0.00e+00	1025.00
IUUC-Tur-126404	Triticum urartu	42.29	8.00e-77	281.00
IUUC-Tme-126971	Tuber melanosporum	33.97	4.00e-107	381.00
IUUC-Tbe-127858	Tupaia belangeri	37.57	2.00e-29	123.00
IUUC-Ttr-128173	Tursiops truncatus	33.98	3.00e-113	402.00
IUUC-Uma-129322	Ustilago maydis	29.62	1.00e-77	283.00
IUUC-Vda-129682	Verticillium dahliae	30.85	6.00e-86	311.00
IUUC-Vpa-130607	Vicugna pacos	32.82	4.00e-101	361.00
IUUC-Vvi-131153	Vitis vinifera	74.04	0.00e+00	1152.00
IUUC-Xtr-132208	Xenopus tropicalis	33.68	3.00e-110	392.00
IUUC-Xma-133098	Xiphophorus maculatus	31.14	5.00e-99	354.00
IUUC-Yli-134646	Yarrowia lipolytica	34.87	1.00e-71	263.00
IUUC-Zma-135920	Zea mays	57.05	0.00e+00	937.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence